RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 VPS13DQ5THJ4 4388 aa8.13□□□□□ -1.11
LSS-205ENST00000457828 KRTAP12-2P59991 146 aa8.12□□□□□ -1.11
LSS-205ENST00000457828 KMT2AQ03164 3969 aa8.12□□□□□ -1.11
LSS-205ENST00000457828 DNAH17Q9UFH2 4485 aa8.09□□□□□ -1.11
LSS-205ENST00000457828 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
LSS-205ENST00000457828 DNAH7Q8WXX0 4024 aa8.08□□□□□ -1.12
LSS-205ENST00000457828 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
LSS-205ENST00000457828 DNAH3Q8TD57 4116 aa8.07□□□□□ -1.12
LSS-205ENST00000457828 LRP1BQ9NZR2 4599 aa8.06□□□□□ -1.12
LSS-205ENST00000457828 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
LSS-205ENST00000457828 FAT1Q14517 4588 aa8.03□□□□□ -1.12
LSS-205ENST00000457828 KIAA1109Q2LD37 5005 aa8.01□□□□□ -1.13
LSS-205ENST00000457828 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
LSS-205ENST00000457828 DNAH2Q9P225 4427 aa7.99□□□□□ -1.13
LSS-205ENST00000457828 KRTAP12-1P59990 96 aa7.99□□□□□ -1.13
LSS-205ENST00000457828 RYR1P21817 5038 aa7.97□□□□□ -1.13
LSS-205ENST00000457828 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.13
LSS-205ENST00000457828 RYR3Q15413 4870 aa7.89□□□□□ -1.15
LSS-205ENST00000457828 A0A0A0MQY5 61 aa7.89□□□□□ -1.15
LSS-205ENST00000457828 DNAH6Q9C0G6 4158 aa7.88□□□□□ -1.15
LSS-205ENST00000457828 HECTD4Q9Y4D8 3996 aa7.87□□□□□ -1.15
LSS-205ENST00000457828 VPS13BQ7Z7G8 4022 aa7.82□□□□□ -1.16
LSS-205ENST00000457828 DYNC2H1Q8NCM8 4307 aaKnown RBP7.75□□□□□ -1.17
LSS-205ENST00000457828 SACSQ9NZJ4 4579 aa7.72□□□□□ -1.17
LSS-205ENST00000457828 RYR2Q92736 4967 aa7.7□□□□□ -1.18
LSS-205ENST00000457828 FAT2Q9NYQ8 4349 aa7.69□□□□□ -1.18
LSS-205ENST00000457828 TNP1P09430 55 aa7.68□□□□□ -1.18
LSS-205ENST00000457828 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
LSS-205ENST00000457828 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
LSS-205ENST00000457828 PP632Q6XCG6 107 aa7.65□□□□□ -1.18
LSS-205ENST00000457828 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
LSS-205ENST00000457828 KMT2CQ8NEZ4 4911 aaKnown RBP7.61□□□□□ -1.19
LSS-205ENST00000457828 HYDINQ4G0P3 5121 aa7.6□□□□□ -1.19
LSS-205ENST00000457828 APOBP04114 4563 aaKnown RBP7.6□□□□□ -1.19
LSS-205ENST00000457828 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
LSS-205ENST00000457828 HERC2O95714 4834 aa7.55□□□□□ -1.2
LSS-205ENST00000457828 BIRC6Q9NR09 4857 aa7.52□□□□□ -1.21
LSS-205ENST00000457828 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
LSS-205ENST00000457828 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
LSS-205ENST00000457828 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
LSS-205ENST00000457828 FAT3Q8TDW7 4589 aa7.4□□□□□ -1.22
LSS-205ENST00000457828 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
LSS-205ENST00000457828 PKD1P98161 4303 aa7.27□□□□□ -1.25
LSS-205ENST00000457828 EPPK1P58107 5090 aaKnown RBP7.26□□□□□ -1.25
LSS-205ENST00000457828 HSPG2P98160 4391 aa7.25□□□□□ -1.25
LSS-205ENST00000457828 LRP2P98164 4655 aa7.16□□□□□ -1.26
LSS-205ENST00000457828 MT1HP80294 61 aa7.12□□□□□ -1.27
LSS-205ENST00000457828 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
LSS-205ENST00000457828 ABCA13Q86UQ4 5058 aa7.06□□□□□ -1.28
LSS-205ENST00000457828 HERC1Q15751 4861 aa6.96□□□□□ -1.29
LSS-205ENST00000457828 MT2AP02795 61 aa6.93□□□□□ -1.3
LSS-205ENST00000457828 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
LSS-205ENST00000457828 LPAP08519 4548 aa6.87□□□□□ -1.31
LSS-205ENST00000457828 MT1FP04733 61 aa6.83□□□□□ -1.32
LSS-205ENST00000457828 TNXBP22105 4242 aa6.83□□□□□ -1.32
LSS-205ENST00000457828 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
LSS-205ENST00000457828 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
LSS-205ENST00000457828 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
LSS-205ENST00000457828 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
LSS-205ENST00000457828 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
LSS-205ENST00000457828 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
LSS-205ENST00000457828 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.36
LSS-205ENST00000457828 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
LSS-205ENST00000457828 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
LSS-205ENST00000457828 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
LSS-205ENST00000457828 KRTAP9-8Q9BYQ0 159 aa6.5□□□□□ -1.37
LSS-205ENST00000457828 INE1O15225 51 aa6.48□□□□□ -1.37
LSS-205ENST00000457828 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
LSS-205ENST00000457828 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.38
LSS-205ENST00000457828 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
LSS-205ENST00000457828 HMCN2Q8NDA2 5059 aa6.43□□□□□ -1.38
LSS-205ENST00000457828 FAT4Q6V0I7 4981 aa6.41□□□□□ -1.38
LSS-205ENST00000457828 MUC2Q02817 5179 aa6.4□□□□□ -1.38
LSS-205ENST00000457828 SPRR5A0A1B0GTR4 108 aa6.34□□□□□ -1.39
LSS-205ENST00000457828 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
LSS-205ENST00000457828 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
LSS-205ENST00000457828 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
LSS-205ENST00000457828 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
LSS-205ENST00000457828 MT1BP07438 61 aa6.25□□□□□ -1.41
LSS-205ENST00000457828 FLGP20930 4061 aaPredicted RBP6.24□□□□□ -1.41
LSS-205ENST00000457828 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
LSS-205ENST00000457828 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
LSS-205ENST00000457828 LCE2BO14633 110 aa6.16□□□□□ -1.42
LSS-205ENST00000457828 KRTAP10-5P60370 271 aa6.16□□□□□ -1.42
LSS-205ENST00000457828 MT1XP80297 61 aa6.14□□□□□ -1.43
LSS-205ENST00000457828 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
LSS-205ENST00000457828 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
LSS-205ENST00000457828 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
LSS-205ENST00000457828 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
LSS-205ENST00000457828 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
LSS-205ENST00000457828 SPRR2EP22531 72 aa5.89□□□□□ -1.47
LSS-205ENST00000457828 SPRR2BP35325 72 aa5.89□□□□□ -1.47
LSS-205ENST00000457828 SPRR2AP35326 72 aa5.89□□□□□ -1.47
LSS-205ENST00000457828 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
LSS-205ENST00000457828 KRTAP19-6Q3LI70 58 aa5.79□□□□□ -1.48
LSS-205ENST00000457828 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
LSS-205ENST00000457828 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
LSS-205ENST00000457828 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
LSS-205ENST00000457828 SPRR2DP22532 72 aa5.68□□□□□ -1.5
LSS-205ENST00000457828 MT1GP13640 62 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms