RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 UQCRQO14949 82 aa5.46□□□□□ -1.54
VEGFA-210ENST00000457104 KRTAP10-5P60370 271 aa5.46□□□□□ -1.54
VEGFA-210ENST00000457104 HIST1H4AP62805 103 aaKnown RBP5.46□□□□□ -1.54
VEGFA-210ENST00000457104 H0Y9P7 68 aa5.44□□□□□ -1.54
VEGFA-210ENST00000457104 ATOX1O00244 68 aa5.42□□□□□ -1.54
VEGFA-210ENST00000457104 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
VEGFA-210ENST00000457104 A0A1B0GV90 55 aa5.41□□□□□ -1.54
VEGFA-210ENST00000457104 IMUPQ9GZP8 106 aa5.4□□□□□ -1.54
VEGFA-210ENST00000457104 NDUFC1O43677 76 aa5.39□□□□□ -1.55
VEGFA-210ENST00000457104 H0YAA0 97 aa5.38□□□□□ -1.55
VEGFA-210ENST00000457104 LINC00643Q86TS7 51 aa5.38□□□□□ -1.55
VEGFA-210ENST00000457104 A8MUN3 132 aa5.35□□□□□ -1.55
VEGFA-210ENST00000457104 LINC00208Q96KT6 92 aa5.35□□□□□ -1.55
VEGFA-210ENST00000457104 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
VEGFA-210ENST00000457104 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
VEGFA-210ENST00000457104 ADM2Q7Z4H4 148 aa5.31□□□□□ -1.56
VEGFA-210ENST00000457104 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
VEGFA-210ENST00000457104 NEBP20929 6669 aa5.3□□□□□ -1.56
VEGFA-210ENST00000457104 MP68P56378 58 aa5.28□□□□□ -1.56
VEGFA-210ENST00000457104 KMT2DO14686 5537 aa5.22□□□□□ -1.57
VEGFA-210ENST00000457104 H3BPC8 53 aa5.22□□□□□ -1.57
VEGFA-210ENST00000457104 MT1XP80297 61 aa5.22□□□□□ -1.57
VEGFA-210ENST00000457104 P0C880 135 aa5.21□□□□□ -1.58
VEGFA-210ENST00000457104 DMAC1Q96GE9 116 aa5.2□□□□□ -1.58
VEGFA-210ENST00000457104 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
VEGFA-210ENST00000457104 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
VEGFA-210ENST00000457104 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
VEGFA-210ENST00000457104 J3QR89 54 aa5.16□□□□□ -1.58
VEGFA-210ENST00000457104 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
VEGFA-210ENST00000457104 R4GN34 69 aa5.16□□□□□ -1.58
VEGFA-210ENST00000457104 SCGB1A1P11684 91 aa5.15□□□□□ -1.59
VEGFA-210ENST00000457104 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.59
VEGFA-210ENST00000457104 C20orf197Q8N268 126 aa5.14□□□□□ -1.59
VEGFA-210ENST00000457104 M0QZ58 72 aa5.13□□□□□ -1.59
VEGFA-210ENST00000457104 K7ERU9 68 aa5.11□□□□□ -1.59
VEGFA-210ENST00000457104 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
VEGFA-210ENST00000457104 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
VEGFA-210ENST00000457104 TRAV7A0A075B6U4 112 aa5.08□□□□□ -1.6
VEGFA-210ENST00000457104 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
VEGFA-210ENST00000457104 KRTAP8-1Q8IUC2 63 aa5.05□□□□□ -1.6
VEGFA-210ENST00000457104 MT-ATP8P03928 68 aa5.04□□□□□ -1.6
VEGFA-210ENST00000457104 ACYP2P14621 99 aa5.04□□□□□ -1.6
VEGFA-210ENST00000457104 SPRR2EP22531 72 aa5.03□□□□□ -1.6
VEGFA-210ENST00000457104 SPRR2BP35325 72 aa5.03□□□□□ -1.6
VEGFA-210ENST00000457104 SPRR2AP35326 72 aa5.03□□□□□ -1.6
VEGFA-210ENST00000457104 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
VEGFA-210ENST00000457104 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
VEGFA-210ENST00000457104 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
VEGFA-210ENST00000457104 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
VEGFA-210ENST00000457104 SMIM20Q8N5G0 67 aa5□□□□□ -1.61
VEGFA-210ENST00000457104 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
VEGFA-210ENST00000457104 KRTAP10-7P60409 375 aaPredicted RBP4.98□□□□□ -1.61
VEGFA-210ENST00000457104 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
VEGFA-210ENST00000457104 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
VEGFA-210ENST00000457104 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
VEGFA-210ENST00000457104 CHKB-CPT1BH3BT56 60 aa4.91□□□□□ -1.62
VEGFA-210ENST00000457104 SPANXA2-OT1Q8N9U9 137 aa4.88□□□□□ -1.63
VEGFA-210ENST00000457104 SPRR2DP22532 72 aa4.86□□□□□ -1.63
VEGFA-210ENST00000457104 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
VEGFA-210ENST00000457104 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
VEGFA-210ENST00000457104 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
VEGFA-210ENST00000457104 SERP2Q8N6R1 65 aa4.83□□□□□ -1.64
VEGFA-210ENST00000457104 PCP4P48539 62 aa4.82□□□□□ -1.64
VEGFA-210ENST00000457104 COA5Q86WW8 74 aa4.75□□□□□ -1.65
VEGFA-210ENST00000457104 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
VEGFA-210ENST00000457104 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
VEGFA-210ENST00000457104 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
VEGFA-210ENST00000457104 ANAPC13Q9BS18 74 aa4.67□□□□□ -1.66
VEGFA-210ENST00000457104 A0A0D9SG42 100 aa4.65□□□□□ -1.67
VEGFA-210ENST00000457104 COX7CP15954 63 aa4.65□□□□□ -1.67
VEGFA-210ENST00000457104 SPATA8Q6RVD6 105 aa4.65□□□□□ -1.67
VEGFA-210ENST00000457104 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
VEGFA-210ENST00000457104 SERP1Q9Y6X1 66 aa4.65□□□□□ -1.67
VEGFA-210ENST00000457104 SEC61GP60059 68 aa4.64□□□□□ -1.67
VEGFA-210ENST00000457104 H7BZZ5 65 aa4.63□□□□□ -1.67
VEGFA-210ENST00000457104 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
VEGFA-210ENST00000457104 A0A1B0GU33 70 aa4.61□□□□□ -1.67
VEGFA-210ENST00000457104 MT1EP04732 61 aa4.61□□□□□ -1.67
VEGFA-210ENST00000457104 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
VEGFA-210ENST00000457104 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
VEGFA-210ENST00000457104 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
VEGFA-210ENST00000457104 CCDC179H3BU77 68 aa4.55□□□□□ -1.68
VEGFA-210ENST00000457104 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
VEGFA-210ENST00000457104 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
VEGFA-210ENST00000457104 A0A1B0GU69 56 aa4.48□□□□□ -1.69
VEGFA-210ENST00000457104 A8MU10 97 aa4.47□□□□□ -1.69
VEGFA-210ENST00000457104 MT1GP13640 62 aa4.47□□□□□ -1.69
VEGFA-210ENST00000457104 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
VEGFA-210ENST00000457104 SVIPQ8NHG7 77 aa4.46□□□□□ -1.7
VEGFA-210ENST00000457104 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
VEGFA-210ENST00000457104 TMEM258P61165 79 aa4.42□□□□□ -1.7
VEGFA-210ENST00000457104 ATP5EP56381 51 aaPredicted RBP4.41□□□□□ -1.7
VEGFA-210ENST00000457104 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
VEGFA-210ENST00000457104 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
VEGFA-210ENST00000457104 MT1MQ8N339 61 aa4.4□□□□□ -1.71
VEGFA-210ENST00000457104 MT1LQ93083 61 aa4.4□□□□□ -1.71
VEGFA-210ENST00000457104 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
VEGFA-210ENST00000457104 TNP1P09430 55 aa4.35□□□□□ -1.71
VEGFA-210ENST00000457104 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
VEGFA-210ENST00000457104 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms