RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 KIAA1109Q2LD37 5005 aa3.86□□□□□ -1.79
FN1-213ENST00000456923 A0A1B0GU33 70 aa3.85□□□□□ -1.79
FN1-213ENST00000456923 TNXBP22105 4242 aa3.85□□□□□ -1.79
FN1-213ENST00000456923 H0YAA0 97 aa3.84□□□□□ -1.79
FN1-213ENST00000456923 ANAPC11Q9NYG5 84 aa3.84□□□□□ -1.79
FN1-213ENST00000456923 TPRXLQ17RH7 258 aa3.83□□□□□ -1.8
FN1-213ENST00000456923 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
FN1-213ENST00000456923 MYCBP2O75592 4640 aa3.82□□□□□ -1.8
FN1-213ENST00000456923 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.81□□□□□ -1.8
FN1-213ENST00000456923 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
FN1-213ENST00000456923 Q5VSD8 79 aa3.81□□□□□ -1.8
FN1-213ENST00000456923 PANO1I0J062 215 aa3.8□□□□□ -1.8
FN1-213ENST00000456923 KRTAP13-1Q8IUC0 172 aa3.8□□□□□ -1.8
FN1-213ENST00000456923 KRTAP7-1Q8IUC3 87 aa3.8□□□□□ -1.8
FN1-213ENST00000456923 TYMSOSQ8TAI1 123 aa3.79□□□□□ -1.8
FN1-213ENST00000456923 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
FN1-213ENST00000456923 SPRR1AP35321 89 aa3.77□□□□□ -1.81
FN1-213ENST00000456923 KRTAP10-8P60410 259 aa3.76□□□□□ -1.81
FN1-213ENST00000456923 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
FN1-213ENST00000456923 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
FN1-213ENST00000456923 RPS29P62273 56 aaKnown RBP3.71□□□□□ -1.81
FN1-213ENST00000456923 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.81
FN1-213ENST00000456923 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
FN1-213ENST00000456923 SPRR1BP22528 89 aa3.68□□□□□ -1.82
FN1-213ENST00000456923 HMCN2Q8NDA2 5059 aa3.67□□□□□ -1.82
FN1-213ENST00000456923 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
FN1-213ENST00000456923 COX6B2Q6YFQ2 88 aa3.63□□□□□ -1.83
FN1-213ENST00000456923 SMR3BP02814 79 aaPredicted RBP3.62□□□□□ -1.83
FN1-213ENST00000456923 LRP1Q07954 4544 aaKnown RBP3.61□□□□□ -1.83
FN1-213ENST00000456923 CAMK2N1Q7Z7J9 78 aa3.6□□□□□ -1.83
FN1-213ENST00000456923 PLAC4Q8WY50 150 aa3.59□□□□□ -1.83
FN1-213ENST00000456923 HERC1Q15751 4861 aa3.59□□□□□ -1.83
FN1-213ENST00000456923 KRTAP13-2Q52LG2 175 aa3.57□□□□□ -1.84
FN1-213ENST00000456923 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
FN1-213ENST00000456923 R4GN34 69 aa3.54□□□□□ -1.84
FN1-213ENST00000456923 S4R3F8 94 aa3.5□□□□□ -1.85
FN1-213ENST00000456923 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
FN1-213ENST00000456923 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
FN1-213ENST00000456923 XP32Q5T750 250 aa3.46□□□□□ -1.86
FN1-213ENST00000456923 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
FN1-213ENST00000456923 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
FN1-213ENST00000456923 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
FN1-213ENST00000456923 LCE2AQ5TA79 106 aaPredicted RBP3.35□□□□□ -1.87
FN1-213ENST00000456923 LPAP08519 4548 aa3.33□□□□□ -1.88
FN1-213ENST00000456923 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
FN1-213ENST00000456923 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
FN1-213ENST00000456923 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
FN1-213ENST00000456923 LRP2P98164 4655 aa3.29□□□□□ -1.88
FN1-213ENST00000456923 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
FN1-213ENST00000456923 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
FN1-213ENST00000456923 LCE2CQ5TA81 110 aa3.27□□□□□ -1.89
FN1-213ENST00000456923 FLGP20930 4061 aaPredicted RBP3.27□□□□□ -1.89
FN1-213ENST00000456923 KRTAP3-2Q9BYR7 98 aa3.26□□□□□ -1.89
FN1-213ENST00000456923 KRTAP4-1Q9BYQ7 146 aa3.24□□□□□ -1.89
FN1-213ENST00000456923 LCE2DQ5TA82 110 aaPredicted RBP3.24□□□□□ -1.89
FN1-213ENST00000456923 M0QZ58 72 aa3.23□□□□□ -1.89
FN1-213ENST00000456923 FAT4Q6V0I7 4981 aa3.18□□□□□ -1.9
FN1-213ENST00000456923 MT1HP80294 61 aa3.16□□□□□ -1.9
FN1-213ENST00000456923 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
FN1-213ENST00000456923 LORP23490 312 aaPredicted RBP3.14□□□□□ -1.91
FN1-213ENST00000456923 KRTAP23-1A1A580 65 aa3.11□□□□□ -1.91
FN1-213ENST00000456923 INE1O15225 51 aa3.08□□□□□ -1.92
FN1-213ENST00000456923 KRTAP3-3Q9BYR6 98 aa3.08□□□□□ -1.92
FN1-213ENST00000456923 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
FN1-213ENST00000456923 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
FN1-213ENST00000456923 KRTAP9-2Q9BYQ4 174 aa3.02□□□□□ -1.93
FN1-213ENST00000456923 MUC2Q02817 5179 aa3.02□□□□□ -1.93
FN1-213ENST00000456923 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
FN1-213ENST00000456923 MT2AP02795 61 aa2.96□□□□□ -1.94
FN1-213ENST00000456923 TNP1P09430 55 aa2.93□□□□□ -1.94
FN1-213ENST00000456923 MT1FP04733 61 aa2.91□□□□□ -1.94
FN1-213ENST00000456923 KRTAP19-6Q3LI70 58 aa2.89□□□□□ -1.95
FN1-213ENST00000456923 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
FN1-213ENST00000456923 CRCT1Q9UGL9 99 aa2.88□□□□□ -1.95
FN1-213ENST00000456923 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
FN1-213ENST00000456923 LCE2BO14633 110 aa2.85□□□□□ -1.95
FN1-213ENST00000456923 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
FN1-213ENST00000456923 KRTAP19-1Q8IUB9 90 aa2.81□□□□□ -1.96
FN1-213ENST00000456923 M0R2T5 61 aa2.8□□□□□ -1.96
FN1-213ENST00000456923 USH2AO75445 5202 aa2.79□□□□□ -1.96
FN1-213ENST00000456923 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
FN1-213ENST00000456923 MT1BP07438 61 aa2.76□□□□□ -1.97
FN1-213ENST00000456923 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
FN1-213ENST00000456923 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
FN1-213ENST00000456923 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
FN1-213ENST00000456923 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.71□□□□□ -1.97
FN1-213ENST00000456923 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
FN1-213ENST00000456923 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
FN1-213ENST00000456923 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
FN1-213ENST00000456923 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
FN1-213ENST00000456923 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
FN1-213ENST00000456923 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
FN1-213ENST00000456923 MT1XP80297 61 aa2.59□□□□□ -1.99
FN1-213ENST00000456923 KRTAP10-12P60413 245 aa2.57□□□□□ -2
FN1-213ENST00000456923 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
FN1-213ENST00000456923 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
FN1-213ENST00000456923 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
FN1-213ENST00000456923 NEBP20929 6669 aa2.44□□□□□ -2.02
FN1-213ENST00000456923 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
FN1-213ENST00000456923 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms