RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 KRTAP3-1Q9BYR8 98 aa1.86□□□□□ -2.11
PPP1R9A-208ENST00000456331 ANK3Q12955 4377 aaKnown RBP1.86□□□□□ -2.11
PPP1R9A-208ENST00000456331 BIRC6Q9NR09 4857 aa1.85□□□□□ -2.11
PPP1R9A-208ENST00000456331 KRTAP10-12P60413 245 aa1.83□□□□□ -2.12
PPP1R9A-208ENST00000456331 RYR3Q15413 4870 aa1.8□□□□□ -2.12
PPP1R9A-208ENST00000456331 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
PPP1R9A-208ENST00000456331 EPPK1P58107 5090 aaKnown RBP1.76□□□□□ -2.13
PPP1R9A-208ENST00000456331 LCE2DQ5TA82 110 aaPredicted RBP1.75□□□□□ -2.13
PPP1R9A-208ENST00000456331 DNAH3Q8TD57 4116 aa1.73□□□□□ -2.13
PPP1R9A-208ENST00000456331 KRTAP4-5Q9BYR2 181 aa1.73□□□□□ -2.13
PPP1R9A-208ENST00000456331 DNAH9Q9NYC9 4486 aa1.72□□□□□ -2.13
PPP1R9A-208ENST00000456331 MT1HL1P0DM35 61 aa1.72□□□□□ -2.13
PPP1R9A-208ENST00000456331 SACSQ9NZJ4 4579 aa1.7□□□□□ -2.14
PPP1R9A-208ENST00000456331 KMT2AQ03164 3969 aa1.7□□□□□ -2.14
PPP1R9A-208ENST00000456331 FRAS1Q86XX4 4008 aa1.7□□□□□ -2.14
PPP1R9A-208ENST00000456331 ALMS1Q8TCU4 4167 aa1.7□□□□□ -2.14
PPP1R9A-208ENST00000456331 KMT2CQ8NEZ4 4911 aaKnown RBP1.69□□□□□ -2.14
PPP1R9A-208ENST00000456331 HERC2O95714 4834 aa1.69□□□□□ -2.14
PPP1R9A-208ENST00000456331 HYDINQ4G0P3 5121 aa1.69□□□□□ -2.14
PPP1R9A-208ENST00000456331 HUWE1Q7Z6Z7 4374 aaKnown RBP1.69□□□□□ -2.14
PPP1R9A-208ENST00000456331 RYR2Q92736 4967 aa1.68□□□□□ -2.14
PPP1R9A-208ENST00000456331 KRTAP10-4P60372 401 aaPredicted RBP1.67□□□□□ -2.14
PPP1R9A-208ENST00000456331 RYR1P21817 5038 aa1.67□□□□□ -2.14
PPP1R9A-208ENST00000456331 LCE3AQ5TA76 89 aa1.67□□□□□ -2.14
PPP1R9A-208ENST00000456331 MT3P25713 68 aa1.66□□□□□ -2.14
PPP1R9A-208ENST00000456331 PCLOQ9Y6V0 5065 aa1.65□□□□□ -2.15
PPP1R9A-208ENST00000456331 UBR4Q5T4S7 5183 aa1.64□□□□□ -2.15
PPP1R9A-208ENST00000456331 DYNC1H1Q14204 4646 aaKnown RBP1.64□□□□□ -2.15
PPP1R9A-208ENST00000456331 KRTAP8-1Q8IUC2 63 aa1.64□□□□□ -2.15
PPP1R9A-208ENST00000456331 SPRR2GQ9BYE4 73 aa1.64□□□□□ -2.15
PPP1R9A-208ENST00000456331 VPS13BQ7Z7G8 4022 aa1.63□□□□□ -2.15
PPP1R9A-208ENST00000456331 KIAA1109Q2LD37 5005 aa1.63□□□□□ -2.15
PPP1R9A-208ENST00000456331 PLECQ15149 4684 aaKnown RBP1.63□□□□□ -2.15
PPP1R9A-208ENST00000456331 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
PPP1R9A-208ENST00000456331 VPS13DQ5THJ4 4388 aa1.62□□□□□ -2.15
PPP1R9A-208ENST00000456331 DNAH10Q8IVF4 4471 aa1.6□□□□□ -2.15
PPP1R9A-208ENST00000456331 KRTAP10-5P60370 271 aa1.6□□□□□ -2.15
PPP1R9A-208ENST00000456331 DNAH2Q9P225 4427 aa1.6□□□□□ -2.15
PPP1R9A-208ENST00000456331 DNAH1Q9P2D7 4330 aa1.6□□□□□ -2.15
PPP1R9A-208ENST00000456331 DNAH11Q96DT5 4516 aa1.59□□□□□ -2.16
PPP1R9A-208ENST00000456331 KRTAP10-7P60409 375 aaPredicted RBP1.58□□□□□ -2.16
PPP1R9A-208ENST00000456331 ABCA13Q86UQ4 5058 aa1.58□□□□□ -2.16
PPP1R9A-208ENST00000456331 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
PPP1R9A-208ENST00000456331 LCE2CQ5TA81 110 aa1.57□□□□□ -2.16
PPP1R9A-208ENST00000456331 LCE3CQ5T5A8 94 aa1.57□□□□□ -2.16
PPP1R9A-208ENST00000456331 KRTAP9-6A0A140TA67 174 aa1.56□□□□□ -2.16
PPP1R9A-208ENST00000456331 LCE2BO14633 110 aa1.56□□□□□ -2.16
PPP1R9A-208ENST00000456331 DYNC2H1Q8NCM8 4307 aaKnown RBP1.56□□□□□ -2.16
PPP1R9A-208ENST00000456331 FAT1Q14517 4588 aa1.56□□□□□ -2.16
PPP1R9A-208ENST00000456331 HSPG2P98160 4391 aa1.55□□□□□ -2.16
PPP1R9A-208ENST00000456331 LORP23490 312 aaPredicted RBP1.55□□□□□ -2.16
PPP1R9A-208ENST00000456331 HERC1Q15751 4861 aa1.55□□□□□ -2.16
PPP1R9A-208ENST00000456331 MYCBP2O75592 4640 aa1.54□□□□□ -2.16
PPP1R9A-208ENST00000456331 LRP1BQ9NZR2 4599 aa1.54□□□□□ -2.16
PPP1R9A-208ENST00000456331 KRTAP9-2Q9BYQ4 174 aa1.54□□□□□ -2.16
PPP1R9A-208ENST00000456331 SPRR5A0A1B0GTR4 108 aa1.52□□□□□ -2.17
PPP1R9A-208ENST00000456331 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
PPP1R9A-208ENST00000456331 DNAH6Q9C0G6 4158 aa1.51□□□□□ -2.17
PPP1R9A-208ENST00000456331 MT1HP80294 61 aa1.51□□□□□ -2.17
PPP1R9A-208ENST00000456331 FLGP20930 4061 aaPredicted RBP1.51□□□□□ -2.17
PPP1R9A-208ENST00000456331 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
PPP1R9A-208ENST00000456331 PRKDCP78527 4128 aaKnown RBP1.51□□□□□ -2.17
PPP1R9A-208ENST00000456331 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
PPP1R9A-208ENST00000456331 DNAH8Q96JB1 4490 aa1.5□□□□□ -2.17
PPP1R9A-208ENST00000456331 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
PPP1R9A-208ENST00000456331 KRTAP19-8Q3LI54 63 aa1.5□□□□□ -2.17
PPP1R9A-208ENST00000456331 MT2AP02795 61 aa1.49□□□□□ -2.17
PPP1R9A-208ENST00000456331 LCE2AQ5TA79 106 aaPredicted RBP1.49□□□□□ -2.17
PPP1R9A-208ENST00000456331 FAT3Q8TDW7 4589 aa1.48□□□□□ -2.17
PPP1R9A-208ENST00000456331 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
PPP1R9A-208ENST00000456331 HMCN2Q8NDA2 5059 aa1.46□□□□□ -2.18
PPP1R9A-208ENST00000456331 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
PPP1R9A-208ENST00000456331 PKHD1P08F94 4074 aa1.44□□□□□ -2.18
PPP1R9A-208ENST00000456331 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
PPP1R9A-208ENST00000456331 STARD9Q9P2P6 4700 aa1.44□□□□□ -2.18
PPP1R9A-208ENST00000456331 MT1GP13640 62 aa1.43□□□□□ -2.18
PPP1R9A-208ENST00000456331 MT1FP04733 61 aa1.42□□□□□ -2.18
PPP1R9A-208ENST00000456331 KRTAP9-7A8MTY7 169 aa1.4□□□□□ -2.18
PPP1R9A-208ENST00000456331 KRTAP4-1Q9BYQ7 146 aa1.4□□□□□ -2.19
PPP1R9A-208ENST00000456331 LCE3EQ5T5B0 92 aa1.39□□□□□ -2.19
PPP1R9A-208ENST00000456331 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
PPP1R9A-208ENST00000456331 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
PPP1R9A-208ENST00000456331 MT1LQ93083 61 aa1.38□□□□□ -2.19
PPP1R9A-208ENST00000456331 KRTAP19-1Q8IUB9 90 aa1.38□□□□□ -2.19
PPP1R9A-208ENST00000456331 LRP2P98164 4655 aa1.37□□□□□ -2.19
PPP1R9A-208ENST00000456331 SPRR2EP22531 72 aa1.37□□□□□ -2.19
PPP1R9A-208ENST00000456331 SPRR2BP35325 72 aa1.37□□□□□ -2.19
PPP1R9A-208ENST00000456331 SPRR2AP35326 72 aa1.37□□□□□ -2.19
PPP1R9A-208ENST00000456331 MT1XP80297 61 aa1.36□□□□□ -2.19
PPP1R9A-208ENST00000456331 RNF213Q63HN8 5207 aa1.36□□□□□ -2.19
PPP1R9A-208ENST00000456331 PKD1P98161 4303 aa1.35□□□□□ -2.19
PPP1R9A-208ENST00000456331 SPRR2DP22532 72 aa1.35□□□□□ -2.19
PPP1R9A-208ENST00000456331 MT1EP04732 61 aa1.34□□□□□ -2.19
PPP1R9A-208ENST00000456331 FAT4Q6V0I7 4981 aa1.34□□□□□ -2.19
PPP1R9A-208ENST00000456331 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.2
PPP1R9A-208ENST00000456331 LPAP08519 4548 aa1.34□□□□□ -2.2
PPP1R9A-208ENST00000456331 LCE3BQ5TA77 95 aa1.33□□□□□ -2.2
PPP1R9A-208ENST00000456331 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
PPP1R9A-208ENST00000456331 PKHD1L1Q86WI1 4243 aa1.32□□□□□ -2.2
PPP1R9A-208ENST00000456331 MT1BP07438 61 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 317.5 ms