RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 RYR3Q15413 4870 aa4.24□□□□□ -1.73
HDAC9-218ENST00000456174 TYMSOSQ8TAI1 123 aa4.23□□□□□ -1.73
HDAC9-218ENST00000456174 CRIPTQ9P021 101 aa4.23□□□□□ -1.73
HDAC9-218ENST00000456174 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
HDAC9-218ENST00000456174 FAT1Q14517 4588 aa4.22□□□□□ -1.73
HDAC9-218ENST00000456174 A0A1B0GU33 70 aa4.21□□□□□ -1.74
HDAC9-218ENST00000456174 K7ERS5 55 aa4.21□□□□□ -1.74
HDAC9-218ENST00000456174 H1FX-AS1Q4G0G2 97 aa4.2□□□□□ -1.74
HDAC9-218ENST00000456174 SPINK1P00995 79 aa4.19□□□□□ -1.74
HDAC9-218ENST00000456174 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
HDAC9-218ENST00000456174 Q5VSD8 79 aa4.17□□□□□ -1.74
HDAC9-218ENST00000456174 KRTAP3-1Q9BYR8 98 aa4.17□□□□□ -1.74
HDAC9-218ENST00000456174 FLG2Q5D862 2391 aaPredicted RBP4.16□□□□□ -1.74
HDAC9-218ENST00000456174 RPS29P62273 56 aaKnown RBP4.15□□□□□ -1.74
HDAC9-218ENST00000456174 XP32Q5T750 250 aa4.15□□□□□ -1.75
HDAC9-218ENST00000456174 HSPG2P98160 4391 aa4.14□□□□□ -1.75
HDAC9-218ENST00000456174 PKHD1L1Q86WI1 4243 aa4.14□□□□□ -1.75
HDAC9-218ENST00000456174 KRTAP17-1Q9BYP8 105 aa4.12□□□□□ -1.75
HDAC9-218ENST00000456174 RYR1P21817 5038 aa4.12□□□□□ -1.75
HDAC9-218ENST00000456174 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
HDAC9-218ENST00000456174 Q8N1X5 172 aa4.09□□□□□ -1.75
HDAC9-218ENST00000456174 EPPK1P58107 5090 aaKnown RBP4.09□□□□□ -1.76
HDAC9-218ENST00000456174 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
HDAC9-218ENST00000456174 KIAA1109Q2LD37 5005 aa4.08□□□□□ -1.76
HDAC9-218ENST00000456174 LRP1Q07954 4544 aaKnown RBP4.07□□□□□ -1.76
HDAC9-218ENST00000456174 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
HDAC9-218ENST00000456174 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
HDAC9-218ENST00000456174 TNXBP22105 4242 aa4.05□□□□□ -1.76
HDAC9-218ENST00000456174 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
HDAC9-218ENST00000456174 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
HDAC9-218ENST00000456174 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
HDAC9-218ENST00000456174 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
HDAC9-218ENST00000456174 KRTAP4-5Q9BYR2 181 aa3.99□□□□□ -1.77
HDAC9-218ENST00000456174 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
HDAC9-218ENST00000456174 DMBT1Q9UGM3 2413 aaPredicted RBP3.98□□□□□ -1.77
HDAC9-218ENST00000456174 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
HDAC9-218ENST00000456174 KRTAP10-6P60371 365 aaPredicted RBP3.91□□□□□ -1.78
HDAC9-218ENST00000456174 S4R3F8 94 aa3.89□□□□□ -1.79
HDAC9-218ENST00000456174 BIRC6Q9NR09 4857 aa3.89□□□□□ -1.79
HDAC9-218ENST00000456174 A0A0D9SG42 100 aa3.88□□□□□ -1.79
HDAC9-218ENST00000456174 ABCA13Q86UQ4 5058 aa3.87□□□□□ -1.79
HDAC9-218ENST00000456174 HERC2O95714 4834 aa3.86□□□□□ -1.79
HDAC9-218ENST00000456174 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
HDAC9-218ENST00000456174 PLAC4Q8WY50 150 aa3.82□□□□□ -1.8
HDAC9-218ENST00000456174 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
HDAC9-218ENST00000456174 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
HDAC9-218ENST00000456174 LPAP08519 4548 aa3.8□□□□□ -1.8
HDAC9-218ENST00000456174 KRTAP12-1P59990 96 aa3.79□□□□□ -1.8
HDAC9-218ENST00000456174 LRP2P98164 4655 aa3.78□□□□□ -1.8
HDAC9-218ENST00000456174 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
HDAC9-218ENST00000456174 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
HDAC9-218ENST00000456174 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
HDAC9-218ENST00000456174 LCE4AQ5TA78 99 aa3.65□□□□□ -1.82
HDAC9-218ENST00000456174 KRTAP4-1Q9BYQ7 146 aa3.65□□□□□ -1.82
HDAC9-218ENST00000456174 M0QZ58 72 aa3.65□□□□□ -1.83
HDAC9-218ENST00000456174 MUC17Q685J3 4493 aa3.64□□□□□ -1.83
HDAC9-218ENST00000456174 HERC1Q15751 4861 aa3.64□□□□□ -1.83
HDAC9-218ENST00000456174 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
HDAC9-218ENST00000456174 KRTAP9-7A8MTY7 169 aa3.6□□□□□ -1.83
HDAC9-218ENST00000456174 HMCN2Q8NDA2 5059 aa3.6□□□□□ -1.83
HDAC9-218ENST00000456174 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
HDAC9-218ENST00000456174 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
HDAC9-218ENST00000456174 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
HDAC9-218ENST00000456174 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
HDAC9-218ENST00000456174 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
HDAC9-218ENST00000456174 R4GN34 69 aa3.55□□□□□ -1.84
HDAC9-218ENST00000456174 KRTAP19-1Q8IUB9 90 aa3.54□□□□□ -1.84
HDAC9-218ENST00000456174 MUC2Q02817 5179 aa3.52□□□□□ -1.85
HDAC9-218ENST00000456174 INE1O15225 51 aa3.52□□□□□ -1.85
HDAC9-218ENST00000456174 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
HDAC9-218ENST00000456174 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
HDAC9-218ENST00000456174 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
HDAC9-218ENST00000456174 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
HDAC9-218ENST00000456174 RNF213Q63HN8 5207 aa3.4□□□□□ -1.87
HDAC9-218ENST00000456174 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
HDAC9-218ENST00000456174 MT1HP80294 61 aa3.37□□□□□ -1.87
HDAC9-218ENST00000456174 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
HDAC9-218ENST00000456174 KRTAP9-3Q9BYQ3 159 aa3.37□□□□□ -1.87
HDAC9-218ENST00000456174 M0R2T5 61 aa3.36□□□□□ -1.87
HDAC9-218ENST00000456174 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
HDAC9-218ENST00000456174 KRTAP4-8Q9BYQ9 185 aa3.27□□□□□ -1.89
HDAC9-218ENST00000456174 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
HDAC9-218ENST00000456174 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.26□□□□□ -1.89
HDAC9-218ENST00000456174 MT2AP02795 61 aa3.26□□□□□ -1.89
HDAC9-218ENST00000456174 KRTAP10-10P60014 251 aa3.25□□□□□ -1.89
HDAC9-218ENST00000456174 MT1FP04733 61 aa3.24□□□□□ -1.89
HDAC9-218ENST00000456174 TNP1P09430 55 aa3.24□□□□□ -1.89
HDAC9-218ENST00000456174 SPRR2GQ9BYE4 73 aa3.22□□□□□ -1.89
HDAC9-218ENST00000456174 LCE3BQ5TA77 95 aa3.17□□□□□ -1.9
HDAC9-218ENST00000456174 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
HDAC9-218ENST00000456174 MT1BP07438 61 aa3.09□□□□□ -1.92
HDAC9-218ENST00000456174 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
HDAC9-218ENST00000456174 KRTAP4-7Q9BYR0 210 aa3.04□□□□□ -1.92
HDAC9-218ENST00000456174 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
HDAC9-218ENST00000456174 MT1XP80297 61 aa3.01□□□□□ -1.93
HDAC9-218ENST00000456174 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
HDAC9-218ENST00000456174 KRTAP10-5P60370 271 aa3□□□□□ -1.93
HDAC9-218ENST00000456174 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
HDAC9-218ENST00000456174 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
HDAC9-218ENST00000456174 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms