RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
THUMPD3-206ENST00000452837 RYR2Q92736 4967 aa6.55□□□□□ -1.36
THUMPD3-206ENST00000452837 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
THUMPD3-206ENST00000452837 KMT2CQ8NEZ4 4911 aaKnown RBP6.54□□□□□ -1.36
THUMPD3-206ENST00000452837 ROMO1P60602 79 aa6.51□□□□□ -1.37
THUMPD3-206ENST00000452837 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
THUMPD3-206ENST00000452837 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
THUMPD3-206ENST00000452837 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
THUMPD3-206ENST00000452837 KRTAP10-8P60410 259 aa6.48□□□□□ -1.37
THUMPD3-206ENST00000452837 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
THUMPD3-206ENST00000452837 LPAP08519 4548 aa6.42□□□□□ -1.38
THUMPD3-206ENST00000452837 A0A0D9SG42 100 aa6.42□□□□□ -1.38
THUMPD3-206ENST00000452837 P0C880 135 aa6.39□□□□□ -1.39
THUMPD3-206ENST00000452837 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
THUMPD3-206ENST00000452837 K7ERS5 55 aa6.38□□□□□ -1.39
THUMPD3-206ENST00000452837 XP32Q5T750 250 aa6.38□□□□□ -1.39
THUMPD3-206ENST00000452837 KRTAP17-1Q9BYP8 105 aa6.36□□□□□ -1.39
THUMPD3-206ENST00000452837 S4R3F8 94 aa6.34□□□□□ -1.39
THUMPD3-206ENST00000452837 Q5VSD8 79 aa6.32□□□□□ -1.4
THUMPD3-206ENST00000452837 RYR1P21817 5038 aa6.31□□□□□ -1.4
THUMPD3-206ENST00000452837 TPRXLQ17RH7 258 aa6.3□□□□□ -1.4
THUMPD3-206ENST00000452837 RYR3Q15413 4870 aa6.29□□□□□ -1.4
THUMPD3-206ENST00000452837 SPINT4Q6UDR6 99 aa6.29□□□□□ -1.4
THUMPD3-206ENST00000452837 LRP2P98164 4655 aa6.28□□□□□ -1.4
THUMPD3-206ENST00000452837 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
THUMPD3-206ENST00000452837 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
THUMPD3-206ENST00000452837 KIAA1109Q2LD37 5005 aa6.25□□□□□ -1.41
THUMPD3-206ENST00000452837 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
THUMPD3-206ENST00000452837 MT1HL1P0DM35 61 aa6.2□□□□□ -1.42
THUMPD3-206ENST00000452837 NDUFAF8A1L188 74 aa6.17□□□□□ -1.42
THUMPD3-206ENST00000452837 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
THUMPD3-206ENST00000452837 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
THUMPD3-206ENST00000452837 EPPK1P58107 5090 aaKnown RBP6.07□□□□□ -1.44
THUMPD3-206ENST00000452837 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
THUMPD3-206ENST00000452837 M0QZ58 72 aa6.01□□□□□ -1.45
THUMPD3-206ENST00000452837 MUC17Q685J3 4493 aa5.98□□□□□ -1.45
THUMPD3-206ENST00000452837 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
THUMPD3-206ENST00000452837 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
THUMPD3-206ENST00000452837 R4GN34 69 aa5.89□□□□□ -1.47
THUMPD3-206ENST00000452837 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
THUMPD3-206ENST00000452837 MUC2Q02817 5179 aa5.81□□□□□ -1.48
THUMPD3-206ENST00000452837 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
THUMPD3-206ENST00000452837 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
THUMPD3-206ENST00000452837 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
THUMPD3-206ENST00000452837 HERC2O95714 4834 aa5.71□□□□□ -1.5
THUMPD3-206ENST00000452837 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
THUMPD3-206ENST00000452837 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
THUMPD3-206ENST00000452837 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
THUMPD3-206ENST00000452837 PCLOQ9Y6V0 5065 aa5.61□□□□□ -1.51
THUMPD3-206ENST00000452837 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
THUMPD3-206ENST00000452837 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
THUMPD3-206ENST00000452837 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
THUMPD3-206ENST00000452837 HERC1Q15751 4861 aa5.5□□□□□ -1.53
THUMPD3-206ENST00000452837 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
THUMPD3-206ENST00000452837 HMCN2Q8NDA2 5059 aa5.42□□□□□ -1.54
THUMPD3-206ENST00000452837 TNP1P09430 55 aa5.39□□□□□ -1.55
THUMPD3-206ENST00000452837 LCE2CQ5TA81 110 aa5.36□□□□□ -1.55
THUMPD3-206ENST00000452837 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
THUMPD3-206ENST00000452837 RNF213Q63HN8 5207 aa5.3□□□□□ -1.56
THUMPD3-206ENST00000452837 SPRR2GQ9BYE4 73 aa5.26□□□□□ -1.57
THUMPD3-206ENST00000452837 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
THUMPD3-206ENST00000452837 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
THUMPD3-206ENST00000452837 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
THUMPD3-206ENST00000452837 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.58
THUMPD3-206ENST00000452837 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
THUMPD3-206ENST00000452837 M0R2T5 61 aa5.18□□□□□ -1.58
THUMPD3-206ENST00000452837 MT1HP80294 61 aa5.18□□□□□ -1.58
THUMPD3-206ENST00000452837 MT1FP04733 61 aa5.17□□□□□ -1.58
THUMPD3-206ENST00000452837 MT2AP02795 61 aa5.13□□□□□ -1.59
THUMPD3-206ENST00000452837 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
THUMPD3-206ENST00000452837 LCE2BO14633 110 aa5.1□□□□□ -1.59
THUMPD3-206ENST00000452837 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
THUMPD3-206ENST00000452837 MT1BP07438 61 aa5.01□□□□□ -1.61
THUMPD3-206ENST00000452837 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
THUMPD3-206ENST00000452837 MT1XP80297 61 aa5□□□□□ -1.61
THUMPD3-206ENST00000452837 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
THUMPD3-206ENST00000452837 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
THUMPD3-206ENST00000452837 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
THUMPD3-206ENST00000452837 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
THUMPD3-206ENST00000452837 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
THUMPD3-206ENST00000452837 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
THUMPD3-206ENST00000452837 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
THUMPD3-206ENST00000452837 KMT2DO14686 5537 aa4.81□□□□□ -1.64
THUMPD3-206ENST00000452837 USH2AO75445 5202 aa4.81□□□□□ -1.64
THUMPD3-206ENST00000452837 INE1O15225 51 aa4.7□□□□□ -1.66
THUMPD3-206ENST00000452837 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
THUMPD3-206ENST00000452837 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
THUMPD3-206ENST00000452837 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
THUMPD3-206ENST00000452837 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
THUMPD3-206ENST00000452837 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
THUMPD3-206ENST00000452837 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
THUMPD3-206ENST00000452837 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
THUMPD3-206ENST00000452837 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
THUMPD3-206ENST00000452837 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
THUMPD3-206ENST00000452837 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
THUMPD3-206ENST00000452837 MT1LQ93083 61 aa4.32□□□□□ -1.72
THUMPD3-206ENST00000452837 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
THUMPD3-206ENST00000452837 MT1EP04732 61 aa4.3□□□□□ -1.72
THUMPD3-206ENST00000452837 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
THUMPD3-206ENST00000452837 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms