RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 KRTAP19-8Q3LI54 63 aa7.26□□□□□ -1.25
SCAMP4-205ENST00000452128 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
SCAMP4-205ENST00000452128 MT1BP07438 61 aa7.25□□□□□ -1.25
SCAMP4-205ENST00000452128 MACF1Q9UPN3 7388 aaKnown RBP7.24□□□□□ -1.25
SCAMP4-205ENST00000452128 FAM236AA0A1B0GUQ0 79 aa7.22□□□□□ -1.25
SCAMP4-205ENST00000452128 FAM236BA0A1B0GV22 79 aa7.22□□□□□ -1.25
SCAMP4-205ENST00000452128 A8MUN3 132 aa7.21□□□□□ -1.26
SCAMP4-205ENST00000452128 MP68P56378 58 aa7.2□□□□□ -1.26
SCAMP4-205ENST00000452128 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
SCAMP4-205ENST00000452128 H3BPC8 53 aa7.18□□□□□ -1.26
SCAMP4-205ENST00000452128 H0YAA0 97 aa7.17□□□□□ -1.26
SCAMP4-205ENST00000452128 IMUPQ9GZP8 106 aa7.16□□□□□ -1.26
SCAMP4-205ENST00000452128 NDUFC1O43677 76 aa7.15□□□□□ -1.26
SCAMP4-205ENST00000452128 MT-ATP8P03928 68 aa7.13□□□□□ -1.27
SCAMP4-205ENST00000452128 Q5VV11 94 aa7.12□□□□□ -1.27
SCAMP4-205ENST00000452128 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
SCAMP4-205ENST00000452128 SCGB1A1P11684 91 aa7.1□□□□□ -1.27
SCAMP4-205ENST00000452128 K7ERU9 68 aa7.07□□□□□ -1.28
SCAMP4-205ENST00000452128 DMAC1Q96GE9 116 aa7.07□□□□□ -1.28
SCAMP4-205ENST00000452128 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
SCAMP4-205ENST00000452128 ADM2Q7Z4H4 148 aa7.02□□□□□ -1.29
SCAMP4-205ENST00000452128 TRAV7A0A075B6U4 112 aa7.01□□□□□ -1.29
SCAMP4-205ENST00000452128 A6NN06 94 aa6.99□□□□□ -1.29
SCAMP4-205ENST00000452128 SMIM20Q8N5G0 67 aa6.98□□□□□ -1.29
SCAMP4-205ENST00000452128 KRTAP6-3Q3LI67 103 aa6.97□□□□□ -1.29
SCAMP4-205ENST00000452128 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
SCAMP4-205ENST00000452128 P0C880 135 aa6.94□□□□□ -1.3
SCAMP4-205ENST00000452128 ACYP2P14621 99 aa6.87□□□□□ -1.31
SCAMP4-205ENST00000452128 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
SCAMP4-205ENST00000452128 MT1XP80297 61 aa6.81□□□□□ -1.32
SCAMP4-205ENST00000452128 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
SCAMP4-205ENST00000452128 SERP2Q8N6R1 65 aa6.8□□□□□ -1.32
SCAMP4-205ENST00000452128 NEBP20929 6669 aa6.79□□□□□ -1.32
SCAMP4-205ENST00000452128 R4GN34 69 aa6.79□□□□□ -1.32
SCAMP4-205ENST00000452128 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
SCAMP4-205ENST00000452128 MUC12Q9UKN1 5478 aa6.76□□□□□ -1.33
SCAMP4-205ENST00000452128 M0QZ58 72 aa6.75□□□□□ -1.33
SCAMP4-205ENST00000452128 KRTAP5-9P26371 169 aa6.72□□□□□ -1.33
SCAMP4-205ENST00000452128 PLAC4Q8WY50 150 aa6.71□□□□□ -1.34
SCAMP4-205ENST00000452128 SPTSSBQ8NFR3 76 aa6.7□□□□□ -1.34
SCAMP4-205ENST00000452128 KMT2DO14686 5537 aa6.69□□□□□ -1.34
SCAMP4-205ENST00000452128 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
SCAMP4-205ENST00000452128 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
SCAMP4-205ENST00000452128 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
SCAMP4-205ENST00000452128 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
SCAMP4-205ENST00000452128 MDN1Q9NU22 5596 aa6.6□□□□□ -1.35
SCAMP4-205ENST00000452128 COX7CP15954 63 aa6.6□□□□□ -1.35
SCAMP4-205ENST00000452128 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
SCAMP4-205ENST00000452128 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
SCAMP4-205ENST00000452128 H7BZZ5 65 aa6.54□□□□□ -1.36
SCAMP4-205ENST00000452128 COA5Q86WW8 74 aa6.54□□□□□ -1.36
SCAMP4-205ENST00000452128 KRTAP20-1Q3LI63 56 aa6.5□□□□□ -1.37
SCAMP4-205ENST00000452128 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
SCAMP4-205ENST00000452128 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
SCAMP4-205ENST00000452128 KRTAP10-12P60413 245 aa6.47□□□□□ -1.37
SCAMP4-205ENST00000452128 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
SCAMP4-205ENST00000452128 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
SCAMP4-205ENST00000452128 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
SCAMP4-205ENST00000452128 ANAPC13Q9BS18 74 aa6.35□□□□□ -1.39
SCAMP4-205ENST00000452128 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
SCAMP4-205ENST00000452128 SPRR2EP22531 72 aa6.31□□□□□ -1.4
SCAMP4-205ENST00000452128 SPRR2BP35325 72 aa6.31□□□□□ -1.4
SCAMP4-205ENST00000452128 SPRR2AP35326 72 aa6.31□□□□□ -1.4
SCAMP4-205ENST00000452128 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
SCAMP4-205ENST00000452128 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
SCAMP4-205ENST00000452128 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
SCAMP4-205ENST00000452128 SEC61GP60059 68 aa6.29□□□□□ -1.4
SCAMP4-205ENST00000452128 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
SCAMP4-205ENST00000452128 A0A1B0GU33 70 aa6.28□□□□□ -1.4
SCAMP4-205ENST00000452128 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
SCAMP4-205ENST00000452128 A0A0D9SG42 100 aa6.22□□□□□ -1.41
SCAMP4-205ENST00000452128 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
SCAMP4-205ENST00000452128 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
SCAMP4-205ENST00000452128 A0A1B0GU69 56 aa6.15□□□□□ -1.42
SCAMP4-205ENST00000452128 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
SCAMP4-205ENST00000452128 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
SCAMP4-205ENST00000452128 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
SCAMP4-205ENST00000452128 SPRR2DP22532 72 aa6.09□□□□□ -1.43
SCAMP4-205ENST00000452128 KRTAP2-2Q9BYT5 123 aa6.09□□□□□ -1.43
SCAMP4-205ENST00000452128 KRTAP2-1Q9BYU5 128 aa6.09□□□□□ -1.43
SCAMP4-205ENST00000452128 A8MU10 97 aa6.07□□□□□ -1.44
SCAMP4-205ENST00000452128 SMIM26A0A096LP01 95 aa6.06□□□□□ -1.44
SCAMP4-205ENST00000452128 LINC01558Q9Y6Z2 57 aa6.06□□□□□ -1.44
SCAMP4-205ENST00000452128 MT1EP04732 61 aa6.01□□□□□ -1.45
SCAMP4-205ENST00000452128 TMEM258P61165 79 aa6.01□□□□□ -1.45
SCAMP4-205ENST00000452128 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
SCAMP4-205ENST00000452128 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
SCAMP4-205ENST00000452128 C10orf95Q9H7T3 257 aa5.95□□□□□ -1.46
SCAMP4-205ENST00000452128 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
SCAMP4-205ENST00000452128 KRTAP19-3Q7Z4W3 81 aa5.92□□□□□ -1.46
SCAMP4-205ENST00000452128 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
SCAMP4-205ENST00000452128 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
SCAMP4-205ENST00000452128 UQCR11O14957 56 aa5.81□□□□□ -1.48
SCAMP4-205ENST00000452128 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
SCAMP4-205ENST00000452128 TNP1P09430 55 aa5.8□□□□□ -1.48
SCAMP4-205ENST00000452128 MT1GP13640 62 aa5.8□□□□□ -1.48
SCAMP4-205ENST00000452128 MT1LQ93083 61 aa5.76□□□□□ -1.49
SCAMP4-205ENST00000452128 Q1T7F1 81 aa5.7□□□□□ -1.5
SCAMP4-205ENST00000452128 MT1MQ8N339 61 aa5.7□□□□□ -1.5
SCAMP4-205ENST00000452128 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms