RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
PRDM15-208ENST00000449395 CSMD3Q7Z407 3707 aa4.63□□□□□ -1.67
PRDM15-208ENST00000449395 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
PRDM15-208ENST00000449395 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
PRDM15-208ENST00000449395 INE1O15225 51 aa4.59□□□□□ -1.67
PRDM15-208ENST00000449395 MT1HP80294 61 aa4.54□□□□□ -1.68
PRDM15-208ENST00000449395 DNAH1Q9P2D7 4330 aa4.53□□□□□ -1.68
PRDM15-208ENST00000449395 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
PRDM15-208ENST00000449395 SPRR2EP22531 72 aa4.53□□□□□ -1.68
PRDM15-208ENST00000449395 SPRR2BP35325 72 aa4.53□□□□□ -1.68
PRDM15-208ENST00000449395 SPRR2AP35326 72 aa4.53□□□□□ -1.68
PRDM15-208ENST00000449395 DNAH9Q9NYC9 4486 aa4.5□□□□□ -1.69
PRDM15-208ENST00000449395 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
PRDM15-208ENST00000449395 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
PRDM15-208ENST00000449395 DNHD1Q96M86 4753 aa4.47□□□□□ -1.69
PRDM15-208ENST00000449395 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
PRDM15-208ENST00000449395 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
PRDM15-208ENST00000449395 SPRR2DP22532 72 aa4.38□□□□□ -1.71
PRDM15-208ENST00000449395 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
PRDM15-208ENST00000449395 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
PRDM15-208ENST00000449395 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.72
PRDM15-208ENST00000449395 PLECQ15149 4684 aaKnown RBP4.32□□□□□ -1.72
PRDM15-208ENST00000449395 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
PRDM15-208ENST00000449395 DNAH5Q8TE73 4624 aa4.28□□□□□ -1.72
PRDM15-208ENST00000449395 MT2AP02795 61 aa4.28□□□□□ -1.72
PRDM15-208ENST00000449395 DNAH3Q8TD57 4116 aa4.27□□□□□ -1.73
PRDM15-208ENST00000449395 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
PRDM15-208ENST00000449395 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
PRDM15-208ENST00000449395 CMYA5Q8N3K9 4069 aa4.24□□□□□ -1.73
PRDM15-208ENST00000449395 FAT2Q9NYQ8 4349 aa4.22□□□□□ -1.73
PRDM15-208ENST00000449395 KMT2AQ03164 3969 aa4.21□□□□□ -1.74
PRDM15-208ENST00000449395 VPS13DQ5THJ4 4388 aa4.2□□□□□ -1.74
PRDM15-208ENST00000449395 STARD9Q9P2P6 4700 aa4.2□□□□□ -1.74
PRDM15-208ENST00000449395 ANK2Q01484 3957 aa4.19□□□□□ -1.74
PRDM15-208ENST00000449395 MT1FP04733 61 aa4.19□□□□□ -1.74
PRDM15-208ENST00000449395 LCE2BO14633 110 aa4.18□□□□□ -1.74
PRDM15-208ENST00000449395 DNAH2Q9P225 4427 aa4.18□□□□□ -1.74
PRDM15-208ENST00000449395 PRKDCP78527 4128 aaKnown RBP4.18□□□□□ -1.74
PRDM15-208ENST00000449395 DNAH17Q9UFH2 4485 aa4.18□□□□□ -1.74
PRDM15-208ENST00000449395 FRAS1Q86XX4 4008 aa4.17□□□□□ -1.74
PRDM15-208ENST00000449395 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
PRDM15-208ENST00000449395 RYR1P21817 5038 aa4.12□□□□□ -1.75
PRDM15-208ENST00000449395 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
PRDM15-208ENST00000449395 LYSTQ99698 3801 aa4.11□□□□□ -1.75
PRDM15-208ENST00000449395 LRP1BQ9NZR2 4599 aa4.1□□□□□ -1.75
PRDM15-208ENST00000449395 DYNC2H1Q8NCM8 4307 aaKnown RBP4.08□□□□□ -1.76
PRDM15-208ENST00000449395 VPS13BQ7Z7G8 4022 aa4.07□□□□□ -1.76
PRDM15-208ENST00000449395 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
PRDM15-208ENST00000449395 DYNC1H1Q14204 4646 aaKnown RBP4.05□□□□□ -1.76
PRDM15-208ENST00000449395 DNAH8Q96JB1 4490 aa4.05□□□□□ -1.76
PRDM15-208ENST00000449395 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
PRDM15-208ENST00000449395 LCE2CQ5TA81 110 aa4.02□□□□□ -1.77
PRDM15-208ENST00000449395 FAT1Q14517 4588 aa4.02□□□□□ -1.77
PRDM15-208ENST00000449395 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
PRDM15-208ENST00000449395 LCE2DQ5TA82 110 aaPredicted RBP4.01□□□□□ -1.77
PRDM15-208ENST00000449395 BIRC6Q9NR09 4857 aa4□□□□□ -1.77
PRDM15-208ENST00000449395 DNAH7Q8WXX0 4024 aa4□□□□□ -1.77
PRDM15-208ENST00000449395 SACSQ9NZJ4 4579 aa3.98□□□□□ -1.77
PRDM15-208ENST00000449395 RYR3Q15413 4870 aa3.97□□□□□ -1.77
PRDM15-208ENST00000449395 DNAH6Q9C0G6 4158 aa3.97□□□□□ -1.77
PRDM15-208ENST00000449395 MT4P47944 62 aa3.97□□□□□ -1.77
PRDM15-208ENST00000449395 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
PRDM15-208ENST00000449395 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
PRDM15-208ENST00000449395 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
PRDM15-208ENST00000449395 HECTD4Q9Y4D8 3996 aa3.94□□□□□ -1.78
PRDM15-208ENST00000449395 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
PRDM15-208ENST00000449395 HERC2O95714 4834 aa3.85□□□□□ -1.79
PRDM15-208ENST00000449395 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
PRDM15-208ENST00000449395 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.8
PRDM15-208ENST00000449395 HSPG2P98160 4391 aa3.83□□□□□ -1.8
PRDM15-208ENST00000449395 APOBP04114 4563 aaKnown RBP3.83□□□□□ -1.8
PRDM15-208ENST00000449395 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
PRDM15-208ENST00000449395 PKHD1P08F94 4074 aa3.74□□□□□ -1.81
PRDM15-208ENST00000449395 LRP1Q07954 4544 aaKnown RBP3.74□□□□□ -1.81
PRDM15-208ENST00000449395 KRTAP9-8Q9BYQ0 159 aa3.73□□□□□ -1.81
PRDM15-208ENST00000449395 MT1XP80297 61 aa3.72□□□□□ -1.81
PRDM15-208ENST00000449395 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
PRDM15-208ENST00000449395 HYDINQ4G0P3 5121 aa3.72□□□□□ -1.81
PRDM15-208ENST00000449395 MYCBP2O75592 4640 aa3.71□□□□□ -1.81
PRDM15-208ENST00000449395 MT1GP13640 62 aa3.7□□□□□ -1.82
PRDM15-208ENST00000449395 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
PRDM15-208ENST00000449395 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
PRDM15-208ENST00000449395 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
PRDM15-208ENST00000449395 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
PRDM15-208ENST00000449395 LPAP08519 4548 aa3.67□□□□□ -1.82
PRDM15-208ENST00000449395 PCLOQ9Y6V0 5065 aa3.66□□□□□ -1.82
PRDM15-208ENST00000449395 MT1BP07438 61 aa3.66□□□□□ -1.82
PRDM15-208ENST00000449395 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
PRDM15-208ENST00000449395 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
PRDM15-208ENST00000449395 KIAA1109Q2LD37 5005 aa3.64□□□□□ -1.83
PRDM15-208ENST00000449395 RYR2Q92736 4967 aa3.63□□□□□ -1.83
PRDM15-208ENST00000449395 PKD1P98161 4303 aa3.61□□□□□ -1.83
PRDM15-208ENST00000449395 TNXBP22105 4242 aa3.57□□□□□ -1.84
PRDM15-208ENST00000449395 HERC1Q15751 4861 aa3.56□□□□□ -1.84
PRDM15-208ENST00000449395 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
PRDM15-208ENST00000449395 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
PRDM15-208ENST00000449395 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
PRDM15-208ENST00000449395 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
PRDM15-208ENST00000449395 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
PRDM15-208ENST00000449395 KMT2CQ8NEZ4 4911 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms