RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
BEST1-202ENST00000449131 LRP1BQ9NZR2 4599 aa3.69□□□□□ -1.82
BEST1-202ENST00000449131 FAT1Q14517 4588 aa3.69□□□□□ -1.82
BEST1-202ENST00000449131 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
BEST1-202ENST00000449131 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
BEST1-202ENST00000449131 A0A1B0GVY2 172 aa3.68□□□□□ -1.82
BEST1-202ENST00000449131 P0C880 135 aa3.68□□□□□ -1.82
BEST1-202ENST00000449131 LCE2BO14633 110 aa3.67□□□□□ -1.82
BEST1-202ENST00000449131 DNAH5Q8TE73 4624 aa3.67□□□□□ -1.82
BEST1-202ENST00000449131 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
BEST1-202ENST00000449131 KRTAP10-8P60410 259 aa3.66□□□□□ -1.82
BEST1-202ENST00000449131 PKHD1P08F94 4074 aa3.66□□□□□ -1.82
BEST1-202ENST00000449131 TPRXLQ17RH7 258 aa3.65□□□□□ -1.82
BEST1-202ENST00000449131 HECTD4Q9Y4D8 3996 aa3.65□□□□□ -1.82
BEST1-202ENST00000449131 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
BEST1-202ENST00000449131 KMT2CQ8NEZ4 4911 aaKnown RBP3.63□□□□□ -1.83
BEST1-202ENST00000449131 VPS13BQ7Z7G8 4022 aa3.6□□□□□ -1.83
BEST1-202ENST00000449131 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
BEST1-202ENST00000449131 TNP1P09430 55 aa3.6□□□□□ -1.83
BEST1-202ENST00000449131 DYNC1H1Q14204 4646 aaKnown RBP3.59□□□□□ -1.83
BEST1-202ENST00000449131 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
BEST1-202ENST00000449131 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
BEST1-202ENST00000449131 KIAA1109Q2LD37 5005 aa3.55□□□□□ -1.84
BEST1-202ENST00000449131 FAT2Q9NYQ8 4349 aa3.55□□□□□ -1.84
BEST1-202ENST00000449131 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
BEST1-202ENST00000449131 ALMS1Q8TCU4 4167 aa3.53□□□□□ -1.84
BEST1-202ENST00000449131 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
BEST1-202ENST00000449131 LRP1Q07954 4544 aaKnown RBP3.52□□□□□ -1.85
BEST1-202ENST00000449131 APOBP04114 4563 aaKnown RBP3.52□□□□□ -1.85
BEST1-202ENST00000449131 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
BEST1-202ENST00000449131 PKD1P98161 4303 aa3.51□□□□□ -1.85
BEST1-202ENST00000449131 RYR3Q15413 4870 aa3.51□□□□□ -1.85
BEST1-202ENST00000449131 RYR2Q92736 4967 aa3.49□□□□□ -1.85
BEST1-202ENST00000449131 FAT3Q8TDW7 4589 aa3.49□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP10-6P60371 365 aaPredicted RBP3.49□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
BEST1-202ENST00000449131 RYR1P21817 5038 aa3.47□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP4-5Q9BYR2 181 aa3.47□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
BEST1-202ENST00000449131 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
BEST1-202ENST00000449131 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
BEST1-202ENST00000449131 KRTAP17-1Q9BYP8 105 aa3.44□□□□□ -1.86
BEST1-202ENST00000449131 MT1HL1P0DM35 61 aa3.42□□□□□ -1.86
BEST1-202ENST00000449131 EPPK1P58107 5090 aaKnown RBP3.41□□□□□ -1.86
BEST1-202ENST00000449131 PRO2289Q9P1D8 64 aa3.37□□□□□ -1.87
BEST1-202ENST00000449131 HSPG2P98160 4391 aa3.37□□□□□ -1.87
BEST1-202ENST00000449131 LRP2P98164 4655 aa3.3□□□□□ -1.88
BEST1-202ENST00000449131 LPAP08519 4548 aa3.29□□□□□ -1.88
BEST1-202ENST00000449131 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
BEST1-202ENST00000449131 HERC2O95714 4834 aa3.28□□□□□ -1.88
BEST1-202ENST00000449131 ABCA13Q86UQ4 5058 aa3.25□□□□□ -1.89
BEST1-202ENST00000449131 TNXBP22105 4242 aa3.21□□□□□ -1.89
BEST1-202ENST00000449131 MUC2Q02817 5179 aa3.21□□□□□ -1.9
BEST1-202ENST00000449131 INE1O15225 51 aa3.19□□□□□ -1.9
BEST1-202ENST00000449131 HERC1Q15751 4861 aa3.17□□□□□ -1.9
BEST1-202ENST00000449131 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
BEST1-202ENST00000449131 KRTAP19-4Q3LI73 84 aa3.12□□□□□ -1.91
BEST1-202ENST00000449131 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
BEST1-202ENST00000449131 RNF213Q63HN8 5207 aa3.11□□□□□ -1.91
BEST1-202ENST00000449131 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
BEST1-202ENST00000449131 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
BEST1-202ENST00000449131 UBR4Q5T4S7 5183 aa3.05□□□□□ -1.92
BEST1-202ENST00000449131 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
BEST1-202ENST00000449131 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
BEST1-202ENST00000449131 KRTAP12-3P60328 96 aa3□□□□□ -1.93
BEST1-202ENST00000449131 HMCN2Q8NDA2 5059 aa2.93□□□□□ -1.94
BEST1-202ENST00000449131 MT1HP80294 61 aa2.92□□□□□ -1.94
BEST1-202ENST00000449131 MT2AP02795 61 aa2.9□□□□□ -1.94
BEST1-202ENST00000449131 SPRR2GQ9BYE4 73 aa2.89□□□□□ -1.95
BEST1-202ENST00000449131 MUC17Q685J3 4493 aa2.89□□□□□ -1.95
BEST1-202ENST00000449131 CRCT1Q9UGL9 99 aa2.88□□□□□ -1.95
BEST1-202ENST00000449131 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
BEST1-202ENST00000449131 MT1FP04733 61 aa2.87□□□□□ -1.95
BEST1-202ENST00000449131 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
BEST1-202ENST00000449131 FLGP20930 4061 aaPredicted RBP2.81□□□□□ -1.96
BEST1-202ENST00000449131 KRTAP19-1Q8IUB9 90 aa2.79□□□□□ -1.96
BEST1-202ENST00000449131 MT3P25713 68 aa2.77□□□□□ -1.97
BEST1-202ENST00000449131 KRTAP8-1Q8IUC2 63 aa2.76□□□□□ -1.97
BEST1-202ENST00000449131 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
BEST1-202ENST00000449131 USH2AO75445 5202 aa2.74□□□□□ -1.97
BEST1-202ENST00000449131 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
BEST1-202ENST00000449131 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
BEST1-202ENST00000449131 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
BEST1-202ENST00000449131 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
BEST1-202ENST00000449131 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
BEST1-202ENST00000449131 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
BEST1-202ENST00000449131 MT1XP80297 61 aa2.67□□□□□ -1.98
BEST1-202ENST00000449131 MT1BP07438 61 aa2.66□□□□□ -1.98
BEST1-202ENST00000449131 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
BEST1-202ENST00000449131 LCE5AQ5TCM9 118 aa2.65□□□□□ -1.98
BEST1-202ENST00000449131 KRTAP9-4Q9BYQ2 154 aa2.65□□□□□ -1.99
BEST1-202ENST00000449131 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
BEST1-202ENST00000449131 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
BEST1-202ENST00000449131 KRTAP4-8A0A0G2JLE6 195 aa2.62□□□□□ -1.99
BEST1-202ENST00000449131 KRTAP4-8Q9BYQ9 185 aa2.62□□□□□ -1.99
BEST1-202ENST00000449131 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -1.99
BEST1-202ENST00000449131 KMT2DO14686 5537 aa2.59□□□□□ -1.99
BEST1-202ENST00000449131 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
BEST1-202ENST00000449131 KRTAP4-7Q9BYR0 210 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms