RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 IGLV7-43P04211 117 aa4.41□□□□□ -1.7
TRIM4-204ENST00000447480 DNAH5Q8TE73 4624 aa4.41□□□□□ -1.7
TRIM4-204ENST00000447480 Q5W150 140 aa4.4□□□□□ -1.71
TRIM4-204ENST00000447480 SMR3BP02814 79 aaPredicted RBP4.39□□□□□ -1.71
TRIM4-204ENST00000447480 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
TRIM4-204ENST00000447480 DYNC1H1Q14204 4646 aaKnown RBP4.35□□□□□ -1.71
TRIM4-204ENST00000447480 IGKV2D-30A0A075B6S6 120 aa4.35□□□□□ -1.71
TRIM4-204ENST00000447480 NOTCH2NLQ7Z3S9 236 aa4.35□□□□□ -1.71
TRIM4-204ENST00000447480 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.71
TRIM4-204ENST00000447480 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
TRIM4-204ENST00000447480 BIRC6Q9NR09 4857 aa4.31□□□□□ -1.72
TRIM4-204ENST00000447480 VPS13BQ7Z7G8 4022 aa4.3□□□□□ -1.72
TRIM4-204ENST00000447480 APOBP04114 4563 aaKnown RBP4.3□□□□□ -1.72
TRIM4-204ENST00000447480 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
TRIM4-204ENST00000447480 KRTAP16-1A8MUX0 517 aa4.29□□□□□ -1.72
TRIM4-204ENST00000447480 KRTAP10-4P60372 401 aaPredicted RBP4.29□□□□□ -1.72
TRIM4-204ENST00000447480 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
TRIM4-204ENST00000447480 RYR1P21817 5038 aa4.29□□□□□ -1.72
TRIM4-204ENST00000447480 RPS29P62273 56 aaKnown RBP4.27□□□□□ -1.73
TRIM4-204ENST00000447480 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
TRIM4-204ENST00000447480 HSPG2P98160 4391 aa4.26□□□□□ -1.73
TRIM4-204ENST00000447480 CSAG1Q6PB30 78 aa4.26□□□□□ -1.73
TRIM4-204ENST00000447480 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
TRIM4-204ENST00000447480 KIAA1109Q2LD37 5005 aa4.26□□□□□ -1.73
TRIM4-204ENST00000447480 K7ERS5 55 aa4.25□□□□□ -1.73
TRIM4-204ENST00000447480 ADM2Q7Z4H4 148 aa4.24□□□□□ -1.73
TRIM4-204ENST00000447480 A8MUU9 505 aa4.23□□□□□ -1.73
TRIM4-204ENST00000447480 SPINK1P00995 79 aa4.23□□□□□ -1.73
TRIM4-204ENST00000447480 KRTAP1-4P0C5Y4 121 aa4.23□□□□□ -1.73
TRIM4-204ENST00000447480 KRTAP25-1Q3LHN0 102 aa4.23□□□□□ -1.73
TRIM4-204ENST00000447480 LINC00304Q8N9R0 145 aa4.22□□□□□ -1.73
TRIM4-204ENST00000447480 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
TRIM4-204ENST00000447480 FLG2Q5D862 2391 aaPredicted RBP4.22□□□□□ -1.73
TRIM4-204ENST00000447480 A0A1B0GU33 70 aa4.2□□□□□ -1.74
TRIM4-204ENST00000447480 DMBT1Q9UGM3 2413 aaPredicted RBP4.2□□□□□ -1.74
TRIM4-204ENST00000447480 KRTAP10-8P60410 259 aa4.19□□□□□ -1.74
TRIM4-204ENST00000447480 HERC2O95714 4834 aa4.19□□□□□ -1.74
TRIM4-204ENST00000447480 FAT1Q14517 4588 aa4.18□□□□□ -1.74
TRIM4-204ENST00000447480 ROMO1P60602 79 aa4.17□□□□□ -1.74
TRIM4-204ENST00000447480 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
TRIM4-204ENST00000447480 KRTAP13-2Q52LG2 175 aa4.16□□□□□ -1.74
TRIM4-204ENST00000447480 COX6B2Q6YFQ2 88 aa4.16□□□□□ -1.74
TRIM4-204ENST00000447480 PKHD1L1Q86WI1 4243 aa4.16□□□□□ -1.74
TRIM4-204ENST00000447480 H0YAA0 97 aa4.13□□□□□ -1.75
TRIM4-204ENST00000447480 C20orf166-AS1Q96NR2 134 aa4.13□□□□□ -1.75
TRIM4-204ENST00000447480 MT1HL1P0DM35 61 aa4.12□□□□□ -1.75
TRIM4-204ENST00000447480 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
TRIM4-204ENST00000447480 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
TRIM4-204ENST00000447480 ABCA13Q86UQ4 5058 aa4.07□□□□□ -1.76
TRIM4-204ENST00000447480 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
TRIM4-204ENST00000447480 TNXBP22105 4242 aa4.04□□□□□ -1.76
TRIM4-204ENST00000447480 LRP1Q07954 4544 aaKnown RBP4.04□□□□□ -1.76
TRIM4-204ENST00000447480 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
TRIM4-204ENST00000447480 TPRXLQ17RH7 258 aa4.04□□□□□ -1.76
TRIM4-204ENST00000447480 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
TRIM4-204ENST00000447480 SEC61BP60468 96 aaKnown RBP3.96□□□□□ -1.78
TRIM4-204ENST00000447480 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
TRIM4-204ENST00000447480 P0C880 135 aa3.92□□□□□ -1.78
TRIM4-204ENST00000447480 KRTAP10-6P60371 365 aaPredicted RBP3.91□□□□□ -1.78
TRIM4-204ENST00000447480 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
TRIM4-204ENST00000447480 C9orf92A6NGG3 77 aa3.9□□□□□ -1.79
TRIM4-204ENST00000447480 M0QZ58 72 aa3.88□□□□□ -1.79
TRIM4-204ENST00000447480 HERC1Q15751 4861 aa3.87□□□□□ -1.79
TRIM4-204ENST00000447480 S4R3F8 94 aa3.85□□□□□ -1.79
TRIM4-204ENST00000447480 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
TRIM4-204ENST00000447480 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
TRIM4-204ENST00000447480 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
TRIM4-204ENST00000447480 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
TRIM4-204ENST00000447480 LRP2P98164 4655 aa3.77□□□□□ -1.81
TRIM4-204ENST00000447480 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
TRIM4-204ENST00000447480 A0A0D9SG42 100 aa3.75□□□□□ -1.81
TRIM4-204ENST00000447480 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
TRIM4-204ENST00000447480 LPAP08519 4548 aa3.73□□□□□ -1.81
TRIM4-204ENST00000447480 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
TRIM4-204ENST00000447480 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
TRIM4-204ENST00000447480 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
TRIM4-204ENST00000447480 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
TRIM4-204ENST00000447480 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
TRIM4-204ENST00000447480 PLAC4Q8WY50 150 aa3.65□□□□□ -1.83
TRIM4-204ENST00000447480 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
TRIM4-204ENST00000447480 MT3P25713 68 aa3.61□□□□□ -1.83
TRIM4-204ENST00000447480 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
TRIM4-204ENST00000447480 M0R2T5 61 aa3.59□□□□□ -1.83
TRIM4-204ENST00000447480 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
TRIM4-204ENST00000447480 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
TRIM4-204ENST00000447480 MUC2Q02817 5179 aa3.58□□□□□ -1.84
TRIM4-204ENST00000447480 R4GN34 69 aa3.57□□□□□ -1.84
TRIM4-204ENST00000447480 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
TRIM4-204ENST00000447480 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
TRIM4-204ENST00000447480 MT1HP80294 61 aa3.5□□□□□ -1.85
TRIM4-204ENST00000447480 KRTAP19-2Q3LHN2 52 aa3.5□□□□□ -1.85
TRIM4-204ENST00000447480 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
TRIM4-204ENST00000447480 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
TRIM4-204ENST00000447480 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
TRIM4-204ENST00000447480 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
TRIM4-204ENST00000447480 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
TRIM4-204ENST00000447480 TNP1P09430 55 aa3.4□□□□□ -1.87
TRIM4-204ENST00000447480 KRTAP10-10P60014 251 aa3.36□□□□□ -1.87
TRIM4-204ENST00000447480 INE1O15225 51 aa3.32□□□□□ -1.88
TRIM4-204ENST00000447480 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms