RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 DNAH2Q9P225 4427 aa7.68□□□□□ -1.18
SIK3-205ENST00000446921 DNAH3Q8TD57 4116 aa7.66□□□□□ -1.18
SIK3-205ENST00000446921 LRP1BQ9NZR2 4599 aa7.66□□□□□ -1.18
SIK3-205ENST00000446921 KMT2AQ03164 3969 aa7.64□□□□□ -1.19
SIK3-205ENST00000446921 VPS13DQ5THJ4 4388 aa7.61□□□□□ -1.19
SIK3-205ENST00000446921 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
SIK3-205ENST00000446921 DNAH6Q9C0G6 4158 aa7.55□□□□□ -1.2
SIK3-205ENST00000446921 STARD9Q9P2P6 4700 aa7.51□□□□□ -1.21
SIK3-205ENST00000446921 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.22
SIK3-205ENST00000446921 DNHD1Q96M86 4753 aa7.43□□□□□ -1.22
SIK3-205ENST00000446921 PRKDCP78527 4128 aaKnown RBP7.38□□□□□ -1.23
SIK3-205ENST00000446921 INE1O15225 51 aa7.38□□□□□ -1.23
SIK3-205ENST00000446921 DNAH5Q8TE73 4624 aa7.34□□□□□ -1.23
SIK3-205ENST00000446921 TNP1P09430 55 aa7.26□□□□□ -1.25
SIK3-205ENST00000446921 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
SIK3-205ENST00000446921 APOBP04114 4563 aaKnown RBP7.23□□□□□ -1.25
SIK3-205ENST00000446921 DYNC2H1Q8NCM8 4307 aaKnown RBP7.22□□□□□ -1.25
SIK3-205ENST00000446921 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.26
SIK3-205ENST00000446921 FAT1Q14517 4588 aa7.2□□□□□ -1.26
SIK3-205ENST00000446921 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
SIK3-205ENST00000446921 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
SIK3-205ENST00000446921 SACSQ9NZJ4 4579 aa7.07□□□□□ -1.28
SIK3-205ENST00000446921 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
SIK3-205ENST00000446921 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
SIK3-205ENST00000446921 HSPG2P98160 4391 aa7□□□□□ -1.29
SIK3-205ENST00000446921 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
SIK3-205ENST00000446921 Q5VSD8 79 aa6.96□□□□□ -1.3
SIK3-205ENST00000446921 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
SIK3-205ENST00000446921 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
SIK3-205ENST00000446921 PKD1P98161 4303 aa6.84□□□□□ -1.31
SIK3-205ENST00000446921 FAT3Q8TDW7 4589 aa6.83□□□□□ -1.32
SIK3-205ENST00000446921 A0A1B0GVY2 172 aa6.76□□□□□ -1.33
SIK3-205ENST00000446921 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
SIK3-205ENST00000446921 LRP2P98164 4655 aa6.75□□□□□ -1.33
SIK3-205ENST00000446921 LPAP08519 4548 aa6.73□□□□□ -1.33
SIK3-205ENST00000446921 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
SIK3-205ENST00000446921 PKHD1L1Q86WI1 4243 aa6.69□□□□□ -1.34
SIK3-205ENST00000446921 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
SIK3-205ENST00000446921 KRTAP21-3Q3LHN1 58 aa6.58□□□□□ -1.36
SIK3-205ENST00000446921 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
SIK3-205ENST00000446921 RYR2Q92736 4967 aa6.47□□□□□ -1.37
SIK3-205ENST00000446921 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
SIK3-205ENST00000446921 RYR3Q15413 4870 aa6.42□□□□□ -1.38
SIK3-205ENST00000446921 TNXBP22105 4242 aa6.39□□□□□ -1.39
SIK3-205ENST00000446921 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
SIK3-205ENST00000446921 M0R2T5 61 aa6.35□□□□□ -1.39
SIK3-205ENST00000446921 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
SIK3-205ENST00000446921 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
SIK3-205ENST00000446921 EPPK1P58107 5090 aaKnown RBP6.25□□□□□ -1.41
SIK3-205ENST00000446921 RYR1P21817 5038 aa6.24□□□□□ -1.41
SIK3-205ENST00000446921 KRTAP8-1Q8IUC2 63 aa6.17□□□□□ -1.42
SIK3-205ENST00000446921 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
SIK3-205ENST00000446921 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
SIK3-205ENST00000446921 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
SIK3-205ENST00000446921 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
SIK3-205ENST00000446921 MUC2Q02817 5179 aa5.96□□□□□ -1.46
SIK3-205ENST00000446921 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
SIK3-205ENST00000446921 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
SIK3-205ENST00000446921 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
SIK3-205ENST00000446921 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
SIK3-205ENST00000446921 HERC2O95714 4834 aa5.9□□□□□ -1.46
SIK3-205ENST00000446921 FLGP20930 4061 aaPredicted RBP5.89□□□□□ -1.47
SIK3-205ENST00000446921 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
SIK3-205ENST00000446921 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
SIK3-205ENST00000446921 HERC1Q15751 4861 aa5.76□□□□□ -1.49
SIK3-205ENST00000446921 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
SIK3-205ENST00000446921 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
SIK3-205ENST00000446921 MT1XP80297 61 aa5.68□□□□□ -1.5
SIK3-205ENST00000446921 FAT4Q6V0I7 4981 aa5.66□□□□□ -1.5
SIK3-205ENST00000446921 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.5
SIK3-205ENST00000446921 MT1FP04733 61 aa5.64□□□□□ -1.51
SIK3-205ENST00000446921 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
SIK3-205ENST00000446921 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
SIK3-205ENST00000446921 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
SIK3-205ENST00000446921 HMCN2Q8NDA2 5059 aa5.58□□□□□ -1.52
SIK3-205ENST00000446921 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
SIK3-205ENST00000446921 MT2AP02795 61 aa5.58□□□□□ -1.52
SIK3-205ENST00000446921 UBR4Q5T4S7 5183 aa5.52□□□□□ -1.53
SIK3-205ENST00000446921 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
SIK3-205ENST00000446921 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
SIK3-205ENST00000446921 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
SIK3-205ENST00000446921 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
SIK3-205ENST00000446921 MT1BP07438 61 aa5.5□□□□□ -1.53
SIK3-205ENST00000446921 KRTAP19-8Q3LI54 63 aa5.47□□□□□ -1.53
SIK3-205ENST00000446921 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
SIK3-205ENST00000446921 MT1HP80294 61 aa5.42□□□□□ -1.54
SIK3-205ENST00000446921 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
SIK3-205ENST00000446921 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
SIK3-205ENST00000446921 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
SIK3-205ENST00000446921 KMT2DO14686 5537 aa5.35□□□□□ -1.55
SIK3-205ENST00000446921 KRTAP9-8Q9BYQ0 159 aa5.3□□□□□ -1.56
SIK3-205ENST00000446921 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
SIK3-205ENST00000446921 OBSCNQ5VST9 7968 aa5.13□□□□□ -1.59
SIK3-205ENST00000446921 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
SIK3-205ENST00000446921 PRM1P04553 51 aa5.06□□□□□ -1.6
SIK3-205ENST00000446921 MT1GP13640 62 aa5.04□□□□□ -1.6
SIK3-205ENST00000446921 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
SIK3-205ENST00000446921 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
SIK3-205ENST00000446921 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
SIK3-205ENST00000446921 MT1LQ93083 61 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms