RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 ACACBO00763 2458 aa0.16□□□□□ -2.38
ATP13A3-204ENST00000446356 WDR87Q6ZQQ6 2873 aa0.16□□□□□ -2.38
ATP13A3-204ENST00000446356 DNAH11Q96DT5 4516 aa0.15□□□□□ -2.39
ATP13A3-204ENST00000446356 RANBP2P49792 3224 aaKnown RBP0.15□□□□□ -2.39
ATP13A3-204ENST00000446356 MYO18BQ8IUG5 2567 aa0.15□□□□□ -2.39
ATP13A3-204ENST00000446356 MGAM2Q2M2H8 2515 aa0.15□□□□□ -2.39
ATP13A3-204ENST00000446356 DYNC2H1Q8NCM8 4307 aaKnown RBP0.14□□□□□ -2.39
ATP13A3-204ENST00000446356 MXRA5Q9NR99 2828 aa0.14□□□□□ -2.39
ATP13A3-204ENST00000446356 COL6A5A8TX70 2615 aa0.14□□□□□ -2.39
ATP13A3-204ENST00000446356 KRTAP8-1Q8IUC2 63 aa0.14□□□□□ -2.39
ATP13A3-204ENST00000446356 SSPOA2VEC9 5147 aa0.14□□□□□ -2.39
ATP13A3-204ENST00000446356 VPS13DQ5THJ4 4388 aa0.13□□□□□ -2.39
ATP13A3-204ENST00000446356 COL12A1Q99715 3063 aa0.12□□□□□ -2.39
ATP13A3-204ENST00000446356 NBPF19A0A087WUL8 3843 aa0.12□□□□□ -2.39
ATP13A3-204ENST00000446356 DNAH6Q9C0G6 4158 aa0.12□□□□□ -2.39
ATP13A3-204ENST00000446356 DNAH1Q9P2D7 4330 aa0.1□□□□□ -2.39
ATP13A3-204ENST00000446356 DNAH8Q96JB1 4490 aa0.09□□□□□ -2.4
ATP13A3-204ENST00000446356 SPENQ96T58 3664 aaKnown RBP0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 TRIOO75962 3097 aa0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 ITPR1Q14643 2758 aa0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 DSTQ03001 7570 aaKnown RBP0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 RPL39P62891 51 aaKnown RBP0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 TOMM7Q9P0U1 55 aa0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 USP9XQ93008 2570 aaPredicted RBP0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 CCDC168Q8NDH2 2452 aa0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 LAMA5O15230 3695 aa0.08□□□□□ -2.4
ATP13A3-204ENST00000446356 TLN2Q9Y4G6 2542 aa0.07□□□□□ -2.4
ATP13A3-204ENST00000446356 LAMA1P25391 3075 aa0.07□□□□□ -2.4
ATP13A3-204ENST00000446356 FRYQ5TBA9 3013 aa0.06□□□□□ -2.4
ATP13A3-204ENST00000446356 DEFB1P60022 68 aa0.05□□□□□ -2.4
ATP13A3-204ENST00000446356 USP9YO00507 2555 aaPredicted RBP0.05□□□□□ -2.4
ATP13A3-204ENST00000446356 MROH2BQ7Z745 1585 aa0.04□□□□□ -2.4
ATP13A3-204ENST00000446356 KRTAP19-5Q3LI72 72 aa0.04□□□□□ -2.4
ATP13A3-204ENST00000446356 CELSR3Q9NYQ7 3312 aa0.03□□□□□ -2.4
ATP13A3-204ENST00000446356 SMR3BP02814 79 aaPredicted RBP0.03□□□□□ -2.4
ATP13A3-204ENST00000446356 MUC2Q02817 5179 aa0.03□□□□□ -2.41
ATP13A3-204ENST00000446356 CHD7Q9P2D1 2997 aa0.03□□□□□ -2.41
ATP13A3-204ENST00000446356 SPTBN5Q9NRC6 3674 aaKnown RBP0.02□□□□□ -2.41
ATP13A3-204ENST00000446356 PCLOQ9Y6V0 5065 aa0.02□□□□□ -2.41
ATP13A3-204ENST00000446356 DNAH7Q8WXX0 4024 aa0.02□□□□□ -2.41
ATP13A3-204ENST00000446356 DUOX1Q9NRD9 1551 aa0.02□□□□□ -2.41
ATP13A3-204ENST00000446356 FAT1Q14517 4588 aa0.01□□□□□ -2.41
ATP13A3-204ENST00000446356 RPL39LQ96EH5 51 aaKnown RBP0.01□□□□□ -2.41
ATP13A3-204ENST00000446356 ITPR3Q14573 2671 aa0□□□□□ -2.41
ATP13A3-204ENST00000446356 LINC01590Q5TEZ4 76 aa0□□□□□ -2.41
ATP13A3-204ENST00000446356 KRTAP19-7Q3SYF9 63 aa-0.01□□□□□ -2.41
ATP13A3-204ENST00000446356 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
ATP13A3-204ENST00000446356 CRYBG3Q68DQ2 2970 aa-0.03□□□□□ -2.41
ATP13A3-204ENST00000446356 MT1HP80294 61 aa-0.03□□□□□ -2.41
ATP13A3-204ENST00000446356 NEBP20929 6669 aa-0.04□□□□□ -2.42
ATP13A3-204ENST00000446356 LEAP2Q969E1 77 aa-0.04□□□□□ -2.42
ATP13A3-204ENST00000446356 MUC17Q685J3 4493 aa-0.04□□□□□ -2.42
ATP13A3-204ENST00000446356 HERC1Q15751 4861 aa-0.05□□□□□ -2.42
ATP13A3-204ENST00000446356 KMT2CQ8NEZ4 4911 aaKnown RBP-0.06□□□□□ -2.42
ATP13A3-204ENST00000446356 SPTAN1Q13813 2472 aaKnown RBP-0.07□□□□□ -2.42
ATP13A3-204ENST00000446356 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
ATP13A3-204ENST00000446356 ADGRG4Q8IZF6 3080 aa-0.08□□□□□ -2.42
ATP13A3-204ENST00000446356 GCC2Q8IWJ2 1684 aa-0.08□□□□□ -2.42
ATP13A3-204ENST00000446356 RELNP78509 3460 aa-0.08□□□□□ -2.42
ATP13A3-204ENST00000446356 DNAH10Q8IVF4 4471 aa-0.09□□□□□ -2.42
ATP13A3-204ENST00000446356 KRTAP19-8Q3LI54 63 aa-0.09□□□□□ -2.42
ATP13A3-204ENST00000446356 CMYA5Q8N3K9 4069 aa-0.09□□□□□ -2.42
ATP13A3-204ENST00000446356 MUC12Q9UKN1 5478 aa-0.1□□□□□ -2.42
ATP13A3-204ENST00000446356 C5orf42Q9H799 3197 aa-0.1□□□□□ -2.42
ATP13A3-204ENST00000446356 ZFHX4Q86UP3 3567 aa-0.1□□□□□ -2.43
ATP13A3-204ENST00000446356 PLECQ15149 4684 aaKnown RBP-0.11□□□□□ -2.43
ATP13A3-204ENST00000446356 MGAQ8IWI9 3026 aa-0.13□□□□□ -2.43
ATP13A3-204ENST00000446356 UBR4Q5T4S7 5183 aa-0.13□□□□□ -2.43
ATP13A3-204ENST00000446356 CSMD1Q96PZ7 3565 aa-0.13□□□□□ -2.43
ATP13A3-204ENST00000446356 LRBAP50851 2863 aa-0.13□□□□□ -2.43
ATP13A3-204ENST00000446356 MT1EP04732 61 aa-0.13□□□□□ -2.43
ATP13A3-204ENST00000446356 DEFB136Q30KP8 78 aa-0.13□□□□□ -2.43
ATP13A3-204ENST00000446356 DNAH17Q9UFH2 4485 aa-0.15□□□□□ -2.43
ATP13A3-204ENST00000446356 DYNC1H1Q14204 4646 aaKnown RBP-0.15□□□□□ -2.43
ATP13A3-204ENST00000446356 ARHGAP5-AS1Q96IT6 56 aa-0.15□□□□□ -2.43
ATP13A3-204ENST00000446356 RHPN1-AS1Q9BWJ2 59 aa-0.16□□□□□ -2.44
ATP13A3-204ENST00000446356 LAMA3Q16787 3333 aa-0.16□□□□□ -2.44
ATP13A3-204ENST00000446356 TEX15Q9BXT5 2789 aa-0.17□□□□□ -2.44
ATP13A3-204ENST00000446356 DMXL2Q8TDJ6 3036 aa-0.18□□□□□ -2.44
ATP13A3-204ENST00000446356 USH2AO75445 5202 aa-0.18□□□□□ -2.44
ATP13A3-204ENST00000446356 CFAP46Q8IYW2 2715 aa-0.19□□□□□ -2.44
ATP13A3-204ENST00000446356 MT1LQ93083 61 aa-0.19□□□□□ -2.44
ATP13A3-204ENST00000446356 DOPEY1Q5JWR5 2465 aa-0.19□□□□□ -2.44
ATP13A3-204ENST00000446356 MYO9AB2RTY4 2548 aa-0.2□□□□□ -2.44
ATP13A3-204ENST00000446356 MT1XP80297 61 aa-0.22□□□□□ -2.44
ATP13A3-204ENST00000446356 RYR1P21817 5038 aa-0.24□□□□□ -2.45
ATP13A3-204ENST00000446356 K7EIM0 57 aa-0.24□□□□□ -2.45
ATP13A3-204ENST00000446356 PRCDQ00LT1 54 aa-0.24□□□□□ -2.45
ATP13A3-204ENST00000446356 TRRAPQ9Y4A5 3859 aa-0.25□□□□□ -2.45
ATP13A3-204ENST00000446356 CEP250Q9BV73 2442 aa-0.26□□□□□ -2.45
ATP13A3-204ENST00000446356 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
ATP13A3-204ENST00000446356 SRCAPQ6ZRS2 3230 aa-0.26□□□□□ -2.45
ATP13A3-204ENST00000446356 CFAP54Q96N23 3096 aa-0.26□□□□□ -2.45
ATP13A3-204ENST00000446356 DNHD1Q96M86 4753 aa-0.27□□□□□ -2.45
ATP13A3-204ENST00000446356 MT4P47944 62 aa-0.27□□□□□ -2.45
ATP13A3-204ENST00000446356 DEFB104AQ8WTQ1 72 aa-0.27□□□□□ -2.45
ATP13A3-204ENST00000446356 HERC2O95714 4834 aa-0.27□□□□□ -2.45
ATP13A3-204ENST00000446356 DNAH5Q8TE73 4624 aa-0.28□□□□□ -2.45
ATP13A3-204ENST00000446356 NIPBLQ6KC79 2804 aaeCLIP-0.28□□□□□ -2.451e-5■■■■□ 22.3
ATP13A3-204ENST00000446356 SMG1Q96Q15 3661 aaKnown RBP-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms