RNA–Protein interactions for RNA: ENST00000444126.5

HCG18-237, Transcript of HLA complex group 18, humanhuman

TSL 5 BASIC

Gene HCG18, Length 4,605 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-237ENST00000444126 SRRM2Q9UQ35 2752 aaKnown RBP3.12□□□□□ -1.91
HCG18-237ENST00000444126 MT1HL1P0DM35 61 aa3.1□□□□□ -1.91
HCG18-237ENST00000444126 PLECQ15149 4684 aaKnown RBP3.09□□□□□ -1.92
HCG18-237ENST00000444126 KRTAP19-4Q3LI73 84 aa3.08□□□□□ -1.92
HCG18-237ENST00000444126 DNAH1Q9P2D7 4330 aa3.06□□□□□ -1.92
HCG18-237ENST00000444126 VPS13DQ5THJ4 4388 aa3.06□□□□□ -1.92
HCG18-237ENST00000444126 DYNC2H1Q8NCM8 4307 aaKnown RBP3.04□□□□□ -1.92
HCG18-237ENST00000444126 KRTAP4-5Q9BYR2 181 aa3.04□□□□□ -1.92
HCG18-237ENST00000444126 PRKDCP78527 4128 aaKnown RBP3.04□□□□□ -1.92
HCG18-237ENST00000444126 KRTAP12-2P59991 146 aa3.03□□□□□ -1.92
HCG18-237ENST00000444126 DNAH5Q8TE73 4624 aa3.03□□□□□ -1.92
HCG18-237ENST00000444126 KRTAP10-10P60014 251 aa3.02□□□□□ -1.93
HCG18-237ENST00000444126 STARD9Q9P2P6 4700 aa3.02□□□□□ -1.93
HCG18-237ENST00000444126 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
HCG18-237ENST00000444126 KRTAP12-1P59990 96 aa3□□□□□ -1.93
HCG18-237ENST00000444126 DNAH17Q9UFH2 4485 aa2.99□□□□□ -1.93
HCG18-237ENST00000444126 CSMD3Q7Z407 3707 aa2.99□□□□□ -1.93
HCG18-237ENST00000444126 DNAH11Q96DT5 4516 aa2.99□□□□□ -1.93
HCG18-237ENST00000444126 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
HCG18-237ENST00000444126 DNAH7Q8WXX0 4024 aa2.97□□□□□ -1.93
HCG18-237ENST00000444126 DNAH6Q9C0G6 4158 aa2.95□□□□□ -1.94
HCG18-237ENST00000444126 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
HCG18-237ENST00000444126 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
HCG18-237ENST00000444126 DNAH2Q9P225 4427 aa2.93□□□□□ -1.94
HCG18-237ENST00000444126 LRP1BQ9NZR2 4599 aa2.92□□□□□ -1.94
HCG18-237ENST00000444126 KMT2AQ03164 3969 aa2.91□□□□□ -1.94
HCG18-237ENST00000444126 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.95
HCG18-237ENST00000444126 RYR2Q92736 4967 aa2.89□□□□□ -1.95
HCG18-237ENST00000444126 LYSTQ99698 3801 aa2.89□□□□□ -1.95
HCG18-237ENST00000444126 FAT1Q14517 4588 aa2.87□□□□□ -1.95
HCG18-237ENST00000444126 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
HCG18-237ENST00000444126 RYR3Q15413 4870 aa2.86□□□□□ -1.95
HCG18-237ENST00000444126 DNAH8Q96JB1 4490 aa2.86□□□□□ -1.95
HCG18-237ENST00000444126 KMT2CQ8NEZ4 4911 aaKnown RBP2.86□□□□□ -1.95
HCG18-237ENST00000444126 HECTD4Q9Y4D8 3996 aa2.86□□□□□ -1.95
HCG18-237ENST00000444126 KRTAP17-1Q9BYP8 105 aa2.85□□□□□ -1.95
HCG18-237ENST00000444126 SACSQ9NZJ4 4579 aa2.85□□□□□ -1.95
HCG18-237ENST00000444126 RYR1P21817 5038 aa2.81□□□□□ -1.96
HCG18-237ENST00000444126 HYDINQ4G0P3 5121 aa2.8□□□□□ -1.96
HCG18-237ENST00000444126 MT3P25713 68 aa2.79□□□□□ -1.96
HCG18-237ENST00000444126 HERC2O95714 4834 aa2.79□□□□□ -1.96
HCG18-237ENST00000444126 PKD1P98161 4303 aa2.78□□□□□ -1.96
HCG18-237ENST00000444126 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
HCG18-237ENST00000444126 FRAS1Q86XX4 4008 aa2.77□□□□□ -1.97
HCG18-237ENST00000444126 EPPK1P58107 5090 aaKnown RBP2.77□□□□□ -1.97
HCG18-237ENST00000444126 KIAA1109Q2LD37 5005 aa2.77□□□□□ -1.97
HCG18-237ENST00000444126 KRTAP4-1Q9BYQ7 146 aa2.75□□□□□ -1.97
HCG18-237ENST00000444126 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
HCG18-237ENST00000444126 PKHD1P08F94 4074 aa2.72□□□□□ -1.97
HCG18-237ENST00000444126 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
HCG18-237ENST00000444126 LRP1Q07954 4544 aaKnown RBP2.67□□□□□ -1.98
HCG18-237ENST00000444126 HSPG2P98160 4391 aa2.66□□□□□ -1.98
HCG18-237ENST00000444126 MT1HP80294 61 aa2.66□□□□□ -1.98
HCG18-237ENST00000444126 MYCBP2O75592 4640 aa2.64□□□□□ -1.99
HCG18-237ENST00000444126 FAT3Q8TDW7 4589 aa2.63□□□□□ -1.99
HCG18-237ENST00000444126 KRTAP10-12P60413 245 aa2.62□□□□□ -1.99
HCG18-237ENST00000444126 PKHD1L1Q86WI1 4243 aa2.6□□□□□ -1.99
HCG18-237ENST00000444126 MT2AP02795 61 aa2.6□□□□□ -1.99
HCG18-237ENST00000444126 ABCA13Q86UQ4 5058 aa2.58□□□□□ -2
HCG18-237ENST00000444126 SPRR2GQ9BYE4 73 aa2.56□□□□□ -2
HCG18-237ENST00000444126 TNXBP22105 4242 aa2.56□□□□□ -2
HCG18-237ENST00000444126 MT1FP04733 61 aa2.56□□□□□ -2
HCG18-237ENST00000444126 KRTAP12-3P60328 96 aa2.54□□□□□ -2
HCG18-237ENST00000444126 LCE3AQ5TA76 89 aa2.53□□□□□ -2
HCG18-237ENST00000444126 HERC1Q15751 4861 aa2.51□□□□□ -2.01
HCG18-237ENST00000444126 LRP2P98164 4655 aa2.51□□□□□ -2.01
HCG18-237ENST00000444126 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
HCG18-237ENST00000444126 LPAP08519 4548 aa2.45□□□□□ -2.02
HCG18-237ENST00000444126 KRTAP19-1Q8IUB9 90 aa2.45□□□□□ -2.02
HCG18-237ENST00000444126 KRTAP8-1Q8IUC2 63 aa2.45□□□□□ -2.02
HCG18-237ENST00000444126 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
HCG18-237ENST00000444126 LCE5AQ5TCM9 118 aa2.43□□□□□ -2.02
HCG18-237ENST00000444126 KRTAP19-8Q3LI54 63 aa2.43□□□□□ -2.02
HCG18-237ENST00000444126 KRTAP9-8Q9BYQ0 159 aa2.42□□□□□ -2.02
HCG18-237ENST00000444126 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
HCG18-237ENST00000444126 HMCN2Q8NDA2 5059 aa2.41□□□□□ -2.02
HCG18-237ENST00000444126 KRTAP10-5P60370 271 aa2.4□□□□□ -2.02
HCG18-237ENST00000444126 KRTAP19-2Q3LHN2 52 aa2.4□□□□□ -2.02
HCG18-237ENST00000444126 LCE4AQ5TA78 99 aa2.4□□□□□ -2.03
HCG18-237ENST00000444126 CRCT1Q9UGL9 99 aa2.39□□□□□ -2.03
HCG18-237ENST00000444126 MT1BP07438 61 aa2.36□□□□□ -2.03
HCG18-237ENST00000444126 KRTAP9-3Q9BYQ3 159 aa2.36□□□□□ -2.03
HCG18-237ENST00000444126 MUC17Q685J3 4493 aa2.36□□□□□ -2.03
HCG18-237ENST00000444126 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.03
HCG18-237ENST00000444126 KRTAP9-7A8MTY7 169 aa2.34□□□□□ -2.03
HCG18-237ENST00000444126 MT1XP80297 61 aa2.34□□□□□ -2.04
HCG18-237ENST00000444126 FLGP20930 4061 aaPredicted RBP2.34□□□□□ -2.04
HCG18-237ENST00000444126 KRTAP19-5Q3LI72 72 aa2.33□□□□□ -2.04
HCG18-237ENST00000444126 KRTAP9-2Q9BYQ4 174 aa2.33□□□□□ -2.04
HCG18-237ENST00000444126 KRTAP10-7P60409 375 aaPredicted RBP2.32□□□□□ -2.04
HCG18-237ENST00000444126 RNF213Q63HN8 5207 aa2.3□□□□□ -2.04
HCG18-237ENST00000444126 SPRR2FQ96RM1 72 aa2.3□□□□□ -2.04
HCG18-237ENST00000444126 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
HCG18-237ENST00000444126 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
HCG18-237ENST00000444126 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
HCG18-237ENST00000444126 FAT4Q6V0I7 4981 aa2.27□□□□□ -2.05
HCG18-237ENST00000444126 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
HCG18-237ENST00000444126 KRTAP4-8A0A0G2JLE6 195 aa2.21□□□□□ -2.06
HCG18-237ENST00000444126 KRTAP4-8Q9BYQ9 185 aa2.21□□□□□ -2.06
HCG18-237ENST00000444126 MUC2Q02817 5179 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 576 ms