RNA–Protein interactions for RNA: ENST00000443981.5

PTPRN-207, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 1,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-207ENST00000443981 MP68P56378 58 aa5.4□□□□□ -1.54
PTPRN-207ENST00000443981 KLKP1Q107X0 134 aa5.4□□□□□ -1.54
PTPRN-207ENST00000443981 LINC00208Q96KT6 92 aa5.4□□□□□ -1.54
PTPRN-207ENST00000443981 A8MUN3 132 aa5.39□□□□□ -1.55
PTPRN-207ENST00000443981 NDUFC1O43677 76 aa5.39□□□□□ -1.55
PTPRN-207ENST00000443981 IMUPQ9GZP8 106 aa5.39□□□□□ -1.55
PTPRN-207ENST00000443981 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
PTPRN-207ENST00000443981 Q5VV11 94 aa5.38□□□□□ -1.55
PTPRN-207ENST00000443981 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
PTPRN-207ENST00000443981 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
PTPRN-207ENST00000443981 CRIPTQ9P021 101 aa5.36□□□□□ -1.55
PTPRN-207ENST00000443981 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.55
PTPRN-207ENST00000443981 H3BPC8 53 aa5.33□□□□□ -1.56
PTPRN-207ENST00000443981 H0YAA0 97 aa5.32□□□□□ -1.56
PTPRN-207ENST00000443981 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
PTPRN-207ENST00000443981 A6NN06 94 aa5.31□□□□□ -1.56
PTPRN-207ENST00000443981 MT1BP07438 61 aa5.31□□□□□ -1.56
PTPRN-207ENST00000443981 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
PTPRN-207ENST00000443981 ADM2Q7Z4H4 148 aa5.24□□□□□ -1.57
PTPRN-207ENST00000443981 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
PTPRN-207ENST00000443981 DMAC1Q96GE9 116 aa5.21□□□□□ -1.58
PTPRN-207ENST00000443981 K7ERU9 68 aa5.2□□□□□ -1.58
PTPRN-207ENST00000443981 C20orf197Q8N268 126 aa5.19□□□□□ -1.58
PTPRN-207ENST00000443981 SMIM20Q8N5G0 67 aa5.19□□□□□ -1.58
PTPRN-207ENST00000443981 TRAV7A0A075B6U4 112 aa5.15□□□□□ -1.59
PTPRN-207ENST00000443981 MT-ATP8P03928 68 aa5.15□□□□□ -1.59
PTPRN-207ENST00000443981 R4GN34 69 aa5.15□□□□□ -1.59
PTPRN-207ENST00000443981 ACYP2P14621 99 aa5.14□□□□□ -1.59
PTPRN-207ENST00000443981 NEBP20929 6669 aa5.14□□□□□ -1.59
PTPRN-207ENST00000443981 PLAC4Q8WY50 150 aa5.12□□□□□ -1.59
PTPRN-207ENST00000443981 SPTSSBQ8NFR3 76 aa5.11□□□□□ -1.59
PTPRN-207ENST00000443981 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
PTPRN-207ENST00000443981 P0C880 135 aa5.09□□□□□ -1.59
PTPRN-207ENST00000443981 M0QZ58 72 aa5.08□□□□□ -1.6
PTPRN-207ENST00000443981 CHKB-CPT1BH3BT56 60 aa5.04□□□□□ -1.6
PTPRN-207ENST00000443981 KRTAP3-2Q9BYR7 98 aa5.04□□□□□ -1.6
PTPRN-207ENST00000443981 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
PTPRN-207ENST00000443981 SNURFQ9Y675 71 aa5.01□□□□□ -1.61
PTPRN-207ENST00000443981 KRTAP5-9P26371 169 aa4.99□□□□□ -1.61
PTPRN-207ENST00000443981 MT1XP80297 61 aa4.99□□□□□ -1.61
PTPRN-207ENST00000443981 SERP2Q8N6R1 65 aa4.98□□□□□ -1.61
PTPRN-207ENST00000443981 SPANXA2-OT1Q8N9U9 137 aa4.98□□□□□ -1.61
PTPRN-207ENST00000443981 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
PTPRN-207ENST00000443981 KRTAP20-1Q3LI63 56 aa4.96□□□□□ -1.62
PTPRN-207ENST00000443981 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
PTPRN-207ENST00000443981 KMT2DO14686 5537 aa4.88□□□□□ -1.63
PTPRN-207ENST00000443981 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
PTPRN-207ENST00000443981 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
PTPRN-207ENST00000443981 COX7CP15954 63 aa4.82□□□□□ -1.64
PTPRN-207ENST00000443981 COA5Q86WW8 74 aa4.82□□□□□ -1.64
PTPRN-207ENST00000443981 SEC61GP60059 68 aa4.81□□□□□ -1.64
PTPRN-207ENST00000443981 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
PTPRN-207ENST00000443981 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
PTPRN-207ENST00000443981 SPRR2EP22531 72 aa4.79□□□□□ -1.64
PTPRN-207ENST00000443981 SPRR2BP35325 72 aa4.79□□□□□ -1.64
PTPRN-207ENST00000443981 SPRR2AP35326 72 aa4.79□□□□□ -1.64
PTPRN-207ENST00000443981 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
PTPRN-207ENST00000443981 SERP1Q9Y6X1 66 aa4.79□□□□□ -1.64
PTPRN-207ENST00000443981 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
PTPRN-207ENST00000443981 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
PTPRN-207ENST00000443981 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
PTPRN-207ENST00000443981 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
PTPRN-207ENST00000443981 KRTAP13-4Q3LI77 160 aa4.74□□□□□ -1.65
PTPRN-207ENST00000443981 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
PTPRN-207ENST00000443981 H7BZZ5 65 aa4.72□□□□□ -1.65
PTPRN-207ENST00000443981 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
PTPRN-207ENST00000443981 A0A1B0GU33 70 aa4.67□□□□□ -1.66
PTPRN-207ENST00000443981 ANAPC13Q9BS18 74 aa4.67□□□□□ -1.66
PTPRN-207ENST00000443981 CYSTM1Q9H1C7 97 aa4.66□□□□□ -1.66
PTPRN-207ENST00000443981 A0A0D9SG42 100 aa4.65□□□□□ -1.67
PTPRN-207ENST00000443981 SPRR2DP22532 72 aa4.64□□□□□ -1.67
PTPRN-207ENST00000443981 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
PTPRN-207ENST00000443981 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
PTPRN-207ENST00000443981 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
PTPRN-207ENST00000443981 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
PTPRN-207ENST00000443981 A0A1B0GU69 56 aa4.61□□□□□ -1.67
PTPRN-207ENST00000443981 SMIM26A0A096LP01 95 aa4.57□□□□□ -1.68
PTPRN-207ENST00000443981 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
PTPRN-207ENST00000443981 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
PTPRN-207ENST00000443981 CCDC179H3BU77 68 aa4.52□□□□□ -1.69
PTPRN-207ENST00000443981 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
PTPRN-207ENST00000443981 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
PTPRN-207ENST00000443981 A8MU10 97 aa4.45□□□□□ -1.7
PTPRN-207ENST00000443981 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
PTPRN-207ENST00000443981 MT1EP04732 61 aa4.42□□□□□ -1.7
PTPRN-207ENST00000443981 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
PTPRN-207ENST00000443981 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
PTPRN-207ENST00000443981 TMEM258P61165 79 aa4.4□□□□□ -1.71
PTPRN-207ENST00000443981 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.71
PTPRN-207ENST00000443981 TNP1P09430 55 aa4.38□□□□□ -1.71
PTPRN-207ENST00000443981 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
PTPRN-207ENST00000443981 UQCR11O14957 56 aa4.35□□□□□ -1.71
PTPRN-207ENST00000443981 MT1GP13640 62 aa4.34□□□□□ -1.71
PTPRN-207ENST00000443981 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
PTPRN-207ENST00000443981 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
PTPRN-207ENST00000443981 PP632Q6XCG6 107 aa4.33□□□□□ -1.72
PTPRN-207ENST00000443981 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
PTPRN-207ENST00000443981 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
PTPRN-207ENST00000443981 MT1LQ93083 61 aa4.24□□□□□ -1.73
PTPRN-207ENST00000443981 MIR22HGQ0VDD5 57 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms