RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
AP1S3-206ENST00000443700 KRTAP13-4Q3LI77 160 aa7.87□□□□□ -1.15
AP1S3-206ENST00000443700 KRTAP21-3Q3LHN1 58 aa7.87□□□□□ -1.15
AP1S3-206ENST00000443700 A0A0D9SG42 100 aa7.85□□□□□ -1.15
AP1S3-206ENST00000443700 KRTAP10-8P60410 259 aa7.85□□□□□ -1.15
AP1S3-206ENST00000443700 LOC100996750A0A140TA64 210 aa7.84□□□□□ -1.15
AP1S3-206ENST00000443700 XP32Q5T750 250 aa7.84□□□□□ -1.15
AP1S3-206ENST00000443700 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
AP1S3-206ENST00000443700 FAT1Q14517 4588 aa7.81□□□□□ -1.16
AP1S3-206ENST00000443700 FAT3Q8TDW7 4589 aa7.77□□□□□ -1.17
AP1S3-206ENST00000443700 TNXBP22105 4242 aa7.75□□□□□ -1.17
AP1S3-206ENST00000443700 P0C880 135 aa7.75□□□□□ -1.17
AP1S3-206ENST00000443700 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
AP1S3-206ENST00000443700 Q5VSD8 79 aa7.73□□□□□ -1.17
AP1S3-206ENST00000443700 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
AP1S3-206ENST00000443700 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
AP1S3-206ENST00000443700 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
AP1S3-206ENST00000443700 DMBT1Q9UGM3 2413 aaPredicted RBP7.66□□□□□ -1.18
AP1S3-206ENST00000443700 HSPG2P98160 4391 aa7.64□□□□□ -1.19
AP1S3-206ENST00000443700 M0QZ58 72 aa7.64□□□□□ -1.19
AP1S3-206ENST00000443700 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
AP1S3-206ENST00000443700 C10orf95Q9H7T3 257 aa7.61□□□□□ -1.19
AP1S3-206ENST00000443700 RYR2Q92736 4967 aa7.56□□□□□ -1.2
AP1S3-206ENST00000443700 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
AP1S3-206ENST00000443700 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
AP1S3-206ENST00000443700 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
AP1S3-206ENST00000443700 R4GN34 69 aa7.36□□□□□ -1.23
AP1S3-206ENST00000443700 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
AP1S3-206ENST00000443700 MYCBP2O75592 4640 aa7.32□□□□□ -1.24
AP1S3-206ENST00000443700 RYR1P21817 5038 aa7.31□□□□□ -1.24
AP1S3-206ENST00000443700 KMT2CQ8NEZ4 4911 aaKnown RBP7.28□□□□□ -1.24
AP1S3-206ENST00000443700 SEC61BP60468 96 aaKnown RBP7.25□□□□□ -1.25
AP1S3-206ENST00000443700 LPAP08519 4548 aa7.21□□□□□ -1.26
AP1S3-206ENST00000443700 LRP2P98164 4655 aa7.16□□□□□ -1.26
AP1S3-206ENST00000443700 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
AP1S3-206ENST00000443700 PP632Q6XCG6 107 aa7.1□□□□□ -1.27
AP1S3-206ENST00000443700 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
AP1S3-206ENST00000443700 RYR3Q15413 4870 aa7.06□□□□□ -1.28
AP1S3-206ENST00000443700 KIAA1109Q2LD37 5005 aa7.03□□□□□ -1.28
AP1S3-206ENST00000443700 CAMK2N1Q7Z7J9 78 aa7.02□□□□□ -1.29
AP1S3-206ENST00000443700 MUC17Q685J3 4493 aa7□□□□□ -1.29
AP1S3-206ENST00000443700 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
AP1S3-206ENST00000443700 KRTAP19-2Q3LHN2 52 aa6.94□□□□□ -1.3
AP1S3-206ENST00000443700 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
AP1S3-206ENST00000443700 J3QL48 77 aa6.9□□□□□ -1.3
AP1S3-206ENST00000443700 LUZP6Q538Z0 58 aa6.9□□□□□ -1.3
AP1S3-206ENST00000443700 ABCA13Q86UQ4 5058 aa6.84□□□□□ -1.31
AP1S3-206ENST00000443700 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
AP1S3-206ENST00000443700 TNP1P09430 55 aa6.81□□□□□ -1.32
AP1S3-206ENST00000443700 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
AP1S3-206ENST00000443700 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
AP1S3-206ENST00000443700 A0A0A0MQY5 61 aa6.7□□□□□ -1.34
AP1S3-206ENST00000443700 LCE2BO14633 110 aa6.69□□□□□ -1.34
AP1S3-206ENST00000443700 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
AP1S3-206ENST00000443700 SPRR5A0A1B0GTR4 108 aa6.63□□□□□ -1.35
AP1S3-206ENST00000443700 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
AP1S3-206ENST00000443700 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
AP1S3-206ENST00000443700 HERC1Q15751 4861 aa6.59□□□□□ -1.35
AP1S3-206ENST00000443700 KRTAP9-6A0A140TA67 174 aa6.57□□□□□ -1.36
AP1S3-206ENST00000443700 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
AP1S3-206ENST00000443700 BIRC6Q9NR09 4857 aa6.51□□□□□ -1.37
AP1S3-206ENST00000443700 HERC2O95714 4834 aa6.44□□□□□ -1.38
AP1S3-206ENST00000443700 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
AP1S3-206ENST00000443700 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
AP1S3-206ENST00000443700 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
AP1S3-206ENST00000443700 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
AP1S3-206ENST00000443700 LCE2AQ5TA79 106 aaPredicted RBP6.39□□□□□ -1.39
AP1S3-206ENST00000443700 LCE3AQ5TA76 89 aa6.35□□□□□ -1.39
AP1S3-206ENST00000443700 M0R2T5 61 aa6.34□□□□□ -1.39
AP1S3-206ENST00000443700 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
AP1S3-206ENST00000443700 MUC2Q02817 5179 aa6.28□□□□□ -1.4
AP1S3-206ENST00000443700 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
AP1S3-206ENST00000443700 MT1HP80294 61 aa6.26□□□□□ -1.41
AP1S3-206ENST00000443700 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
AP1S3-206ENST00000443700 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
AP1S3-206ENST00000443700 KRTAP10-10P60014 251 aa6.24□□□□□ -1.41
AP1S3-206ENST00000443700 KRTAP8-1Q8IUC2 63 aa6.24□□□□□ -1.41
AP1S3-206ENST00000443700 MT2AP02795 61 aa6.23□□□□□ -1.41
AP1S3-206ENST00000443700 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
AP1S3-206ENST00000443700 MT1FP04733 61 aa6.21□□□□□ -1.41
AP1S3-206ENST00000443700 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
AP1S3-206ENST00000443700 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
AP1S3-206ENST00000443700 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
AP1S3-206ENST00000443700 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
AP1S3-206ENST00000443700 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
AP1S3-206ENST00000443700 INE1O15225 51 aa6.08□□□□□ -1.44
AP1S3-206ENST00000443700 MT1BP07438 61 aa6.07□□□□□ -1.44
AP1S3-206ENST00000443700 MT1XP80297 61 aa6.07□□□□□ -1.44
AP1S3-206ENST00000443700 PRO2289Q9P1D8 64 aa6.07□□□□□ -1.44
AP1S3-206ENST00000443700 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
AP1S3-206ENST00000443700 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
AP1S3-206ENST00000443700 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
AP1S3-206ENST00000443700 KRTAP4-2Q9BYR5 136 aa6□□□□□ -1.45
AP1S3-206ENST00000443700 LCE1DQ5T752 114 aa5.99□□□□□ -1.45
AP1S3-206ENST00000443700 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
AP1S3-206ENST00000443700 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
AP1S3-206ENST00000443700 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
AP1S3-206ENST00000443700 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
AP1S3-206ENST00000443700 UBR4Q5T4S7 5183 aa5.85□□□□□ -1.47
AP1S3-206ENST00000443700 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms