RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 XIRP2A4UGR9 3374 aa1.17□□□□□ -2.22
R3HDM1-209ENST00000441871 PKD1P98161 4303 aa1.17□□□□□ -2.22
R3HDM1-209ENST00000441871 PLECQ15149 4684 aaKnown RBP1.17□□□□□ -2.22
R3HDM1-209ENST00000441871 LINC01556Q5JQF7 62 aa1.17□□□□□ -2.22
R3HDM1-209ENST00000441871 MTORP42345 2549 aa1.17□□□□□ -2.22
R3HDM1-209ENST00000441871 MAP1AP78559 2803 aaPredicted RBP1.16□□□□□ -2.22
R3HDM1-209ENST00000441871 DMXL2Q8TDJ6 3036 aa1.16□□□□□ -2.22
R3HDM1-209ENST00000441871 SONP18583 2426 aaKnown RBP1.16□□□□□ -2.22
R3HDM1-209ENST00000441871 CFAP47Q6ZTR5 3102 aa1.16□□□□□ -2.22
R3HDM1-209ENST00000441871 SRCAPQ6ZRS2 3230 aa1.15□□□□□ -2.22
R3HDM1-209ENST00000441871 DCHS1Q96JQ0 3298 aa1.15□□□□□ -2.22
R3HDM1-209ENST00000441871 PKHD1P08F94 4074 aa1.14□□□□□ -2.23
R3HDM1-209ENST00000441871 ACANP16112 2415 aa1.14□□□□□ -2.23
R3HDM1-209ENST00000441871 FREM2Q5SZK8 3169 aa1.14□□□□□ -2.23
R3HDM1-209ENST00000441871 DNAH12Q6ZR08 3092 aa1.14□□□□□ -2.23
R3HDM1-209ENST00000441871 DNAH9Q9NYC9 4486 aa1.13□□□□□ -2.23
R3HDM1-209ENST00000441871 DEFB133Q30KQ1 61 aa1.13□□□□□ -2.23
R3HDM1-209ENST00000441871 ANKRD11Q6UB99 2663 aaPredicted RBP1.13□□□□□ -2.23
R3HDM1-209ENST00000441871 TRRAPQ9Y4A5 3859 aa1.13□□□□□ -2.23
R3HDM1-209ENST00000441871 SPEGQ15772 3267 aa1.13□□□□□ -2.23
R3HDM1-209ENST00000441871 STAB1Q9NY15 2570 aa1.12□□□□□ -2.23
R3HDM1-209ENST00000441871 ACACBO00763 2458 aa1.12□□□□□ -2.23
R3HDM1-209ENST00000441871 GOLGB1Q14789 3259 aaKnown RBP1.12□□□□□ -2.23
R3HDM1-209ENST00000441871 NBEAL2Q6ZNJ1 2754 aa1.12□□□□□ -2.23
R3HDM1-209ENST00000441871 VPS13AQ96RL7 3174 aa1.12□□□□□ -2.23
R3HDM1-209ENST00000441871 TACC2O95359 2948 aa1.12□□□□□ -2.23
R3HDM1-209ENST00000441871 ZANQ9Y493 2812 aa1.11□□□□□ -2.23
R3HDM1-209ENST00000441871 APOBP04114 4563 aaKnown RBP1.11□□□□□ -2.23
R3HDM1-209ENST00000441871 PRM1P04553 51 aa1.11□□□□□ -2.23
R3HDM1-209ENST00000441871 KRTAP8-1Q8IUC2 63 aa1.11□□□□□ -2.23
R3HDM1-209ENST00000441871 UTP20O75691 2785 aaKnown RBP1.11□□□□□ -2.23
R3HDM1-209ENST00000441871 PKD1L1Q8TDX9 2849 aa1.11□□□□□ -2.23
R3HDM1-209ENST00000441871 TEP1Q99973 2627 aaKnown RBP1.1□□□□□ -2.23
R3HDM1-209ENST00000441871 FBN3Q75N90 2809 aa1.1□□□□□ -2.23
R3HDM1-209ENST00000441871 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
R3HDM1-209ENST00000441871 LRP1Q07954 4544 aaKnown RBP1.1□□□□□ -2.23
R3HDM1-209ENST00000441871 KALRNO60229 2985 aa1.1□□□□□ -2.23
R3HDM1-209ENST00000441871 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.23
R3HDM1-209ENST00000441871 TLN2Q9Y4G6 2542 aa1.09□□□□□ -2.23
R3HDM1-209ENST00000441871 CFAP46Q8IYW2 2715 aa1.09□□□□□ -2.23
R3HDM1-209ENST00000441871 U3KQA8 63 aa1.09□□□□□ -2.23
R3HDM1-209ENST00000441871 NOTCH1P46531 2555 aa1.08□□□□□ -2.24
R3HDM1-209ENST00000441871 UNC79Q9P2D8 2635 aa1.08□□□□□ -2.24
R3HDM1-209ENST00000441871 DNAH17Q9UFH2 4485 aa1.08□□□□□ -2.24
R3HDM1-209ENST00000441871 ANKHD1Q8IWZ3 2542 aaKnown RBP1.08□□□□□ -2.24
R3HDM1-209ENST00000441871 RPS29P62273 56 aaKnown RBP1.08□□□□□ -2.24
R3HDM1-209ENST00000441871 WDFY4Q6ZS81 3184 aa1.08□□□□□ -2.24
R3HDM1-209ENST00000441871 CSMD2Q7Z408 3487 aa1.08□□□□□ -2.24
R3HDM1-209ENST00000441871 MYO18BQ8IUG5 2567 aa1.07□□□□□ -2.24
R3HDM1-209ENST00000441871 USP9XQ93008 2570 aaPredicted RBP1.07□□□□□ -2.24
R3HDM1-209ENST00000441871 MUC3AQ02505 3323 aa1.07□□□□□ -2.24
R3HDM1-209ENST00000441871 UTRNP46939 3433 aa1.06□□□□□ -2.24
R3HDM1-209ENST00000441871 NSD1Q96L73 2696 aaPredicted RBP1.06□□□□□ -2.24
R3HDM1-209ENST00000441871 DOPEY1Q5JWR5 2465 aa1.06□□□□□ -2.24
R3HDM1-209ENST00000441871 NIPBLQ6KC79 2804 aaeCLIP1.06□□□□□ -2.24
R3HDM1-209ENST00000441871 SVEP1Q4LDE5 3571 aa1.06□□□□□ -2.24
R3HDM1-209ENST00000441871 LAMA3Q16787 3333 aa1.06□□□□□ -2.24
R3HDM1-209ENST00000441871 HIVEP1P15822 2718 aa1.06□□□□□ -2.24
R3HDM1-209ENST00000441871 CENPEQ02224 2701 aa1.06□□□□□ -2.24
R3HDM1-209ENST00000441871 FAT1Q14517 4588 aa1.05□□□□□ -2.24
R3HDM1-209ENST00000441871 TGP01266 2768 aa1.05□□□□□ -2.24
R3HDM1-209ENST00000441871 CD52P31358 61 aa1.05□□□□□ -2.24
R3HDM1-209ENST00000441871 TENM3Q9P273 2699 aa1.05□□□□□ -2.24
R3HDM1-209ENST00000441871 ZFYVE26Q68DK2 2539 aa1.05□□□□□ -2.24
R3HDM1-209ENST00000441871 MXRA5Q9NR99 2828 aa1.04□□□□□ -2.24
R3HDM1-209ENST00000441871 HRNRQ86YZ3 2850 aaPredicted RBP1.04□□□□□ -2.24
R3HDM1-209ENST00000441871 USP34Q70CQ2 3546 aa1.04□□□□□ -2.24
R3HDM1-209ENST00000441871 LOC400499M0QZD8 3231 aa1.04□□□□□ -2.24
R3HDM1-209ENST00000441871 ASPMQ8IZT6 3477 aa1.03□□□□□ -2.24
R3HDM1-209ENST00000441871 HTN3P15516 51 aa1.03□□□□□ -2.24
R3HDM1-209ENST00000441871 LAMA1P25391 3075 aa1.03□□□□□ -2.24
R3HDM1-209ENST00000441871 DYNC1H1Q14204 4646 aaKnown RBP1.02□□□□□ -2.25
R3HDM1-209ENST00000441871 FASNP49327 2511 aaKnown RBP1.01□□□□□ -2.25
R3HDM1-209ENST00000441871 VPS13CQ709C8 3753 aa1.01□□□□□ -2.25
R3HDM1-209ENST00000441871 TEX15Q9BXT5 2789 aa1.01□□□□□ -2.25
R3HDM1-209ENST00000441871 FLNAP21333 2647 aaKnown RBP1.01□□□□□ -2.25
R3HDM1-209ENST00000441871 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
R3HDM1-209ENST00000441871 ITPR2Q14571 2701 aa0.99□□□□□ -2.25
R3HDM1-209ENST00000441871 FLNBO75369 2602 aaKnown RBP0.99□□□□□ -2.25
R3HDM1-209ENST00000441871 ADGRG4Q8IZF6 3080 aa0.98□□□□□ -2.25
R3HDM1-209ENST00000441871 LPAP08519 4548 aa0.98□□□□□ -2.25
R3HDM1-209ENST00000441871 SMR3BP02814 79 aaPredicted RBP0.98□□□□□ -2.25
R3HDM1-209ENST00000441871 EP400Q96L91 3159 aa0.98□□□□□ -2.25
R3HDM1-209ENST00000441871 PCNTO95613 3336 aa0.97□□□□□ -2.25
R3HDM1-209ENST00000441871 MYO15AQ9UKN7 3530 aa0.97□□□□□ -2.25
R3HDM1-209ENST00000441871 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
R3HDM1-209ENST00000441871 MYO9AB2RTY4 2548 aa0.96□□□□□ -2.26
R3HDM1-209ENST00000441871 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
R3HDM1-209ENST00000441871 SPTAN1Q13813 2472 aaKnown RBP0.96□□□□□ -2.26
R3HDM1-209ENST00000441871 NBEAL1Q6ZS30 2694 aa0.95□□□□□ -2.26
R3HDM1-209ENST00000441871 MAST4O15021 2626 aa0.95□□□□□ -2.26
R3HDM1-209ENST00000441871 TLN1Q9Y490 2541 aaKnown RBP0.94□□□□□ -2.26
R3HDM1-209ENST00000441871 LAMA2P24043 3122 aaKnown RBP0.94□□□□□ -2.26
R3HDM1-209ENST00000441871 VCANP13611 3396 aa0.94□□□□□ -2.26
R3HDM1-209ENST00000441871 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
R3HDM1-209ENST00000441871 DEFB4AO15263 64 aa0.93□□□□□ -2.26
R3HDM1-209ENST00000441871 KRTAP19-5Q3LI72 72 aa0.93□□□□□ -2.26
R3HDM1-209ENST00000441871 LRP1BQ9NZR2 4599 aa0.93□□□□□ -2.26
R3HDM1-209ENST00000441871 HERC1Q15751 4861 aa0.92□□□□□ -2.26
R3HDM1-209ENST00000441871 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms