RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 A0A1B0GV90 55 aa6.04□□□□□ -1.44
PTPRN-205ENST00000440552 LCE1AQ5T7P2 110 aa6□□□□□ -1.45
PTPRN-205ENST00000440552 GTF2H5Q6ZYL4 71 aa6□□□□□ -1.45
PTPRN-205ENST00000440552 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
PTPRN-205ENST00000440552 TP53AIP1Q9HCN2 124 aa5.98□□□□□ -1.45
PTPRN-205ENST00000440552 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
PTPRN-205ENST00000440552 TAX1BP3O14907 124 aa5.97□□□□□ -1.45
PTPRN-205ENST00000440552 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
PTPRN-205ENST00000440552 H0YAA0 97 aa5.95□□□□□ -1.46
PTPRN-205ENST00000440552 MT1XP80297 61 aa5.95□□□□□ -1.46
PTPRN-205ENST00000440552 A0A087WVE0 104 aa5.94□□□□□ -1.46
PTPRN-205ENST00000440552 UBL5Q9BZL1 73 aa5.93□□□□□ -1.46
PTPRN-205ENST00000440552 A0A1W2PPM0 123 aa5.92□□□□□ -1.46
PTPRN-205ENST00000440552 KRTAP12-2P59991 146 aa5.92□□□□□ -1.46
PTPRN-205ENST00000440552 CYP4F30PQ9H0H9 118 aa5.92□□□□□ -1.46
PTPRN-205ENST00000440552 SPRR2DP22532 72 aa5.91□□□□□ -1.46
PTPRN-205ENST00000440552 K7EP34 96 aa5.9□□□□□ -1.46
PTPRN-205ENST00000440552 A8MUN3 132 aa5.89□□□□□ -1.47
PTPRN-205ENST00000440552 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
PTPRN-205ENST00000440552 F8W1H4 67 aa5.87□□□□□ -1.47
PTPRN-205ENST00000440552 NDUFC1O43677 76 aa5.86□□□□□ -1.47
PTPRN-205ENST00000440552 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
PTPRN-205ENST00000440552 K7ERU9 68 aa5.85□□□□□ -1.47
PTPRN-205ENST00000440552 J3QR89 54 aa5.84□□□□□ -1.47
PTPRN-205ENST00000440552 LOC101927531A0A1B0GV80 90 aa5.83□□□□□ -1.48
PTPRN-205ENST00000440552 ADM2Q7Z4H4 148 aa5.82□□□□□ -1.48
PTPRN-205ENST00000440552 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
PTPRN-205ENST00000440552 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
PTPRN-205ENST00000440552 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
PTPRN-205ENST00000440552 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
PTPRN-205ENST00000440552 TRAV22A0A0B4J277 110 aa5.78□□□□□ -1.48
PTPRN-205ENST00000440552 PRO0461Q9UI25 63 aa5.73□□□□□ -1.49
PTPRN-205ENST00000440552 ACYP1P07311 99 aa5.72□□□□□ -1.49
PTPRN-205ENST00000440552 R4GN34 69 aa5.71□□□□□ -1.5
PTPRN-205ENST00000440552 ATOX1O00244 68 aa5.67□□□□□ -1.5
PTPRN-205ENST00000440552 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
PTPRN-205ENST00000440552 ETDBQ3ZM63 59 aa5.67□□□□□ -1.5
PTPRN-205ENST00000440552 C20orf197Q8N268 126 aa5.67□□□□□ -1.5
PTPRN-205ENST00000440552 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
PTPRN-205ENST00000440552 UQCRQO14949 82 aa5.65□□□□□ -1.5
PTPRN-205ENST00000440552 FAM240AA0A1B0GVK7 77 aa5.64□□□□□ -1.51
PTPRN-205ENST00000440552 M0QZ58 72 aa5.64□□□□□ -1.51
PTPRN-205ENST00000440552 P0C880 135 aa5.64□□□□□ -1.51
PTPRN-205ENST00000440552 H0Y9P7 68 aa5.63□□□□□ -1.51
PTPRN-205ENST00000440552 SCGB1A1P11684 91 aa5.62□□□□□ -1.51
PTPRN-205ENST00000440552 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
PTPRN-205ENST00000440552 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
PTPRN-205ENST00000440552 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
PTPRN-205ENST00000440552 PCP4P48539 62 aa5.51□□□□□ -1.53
PTPRN-205ENST00000440552 ATP5EP2Q5VTU8 51 aa5.51□□□□□ -1.53
PTPRN-205ENST00000440552 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
PTPRN-205ENST00000440552 LINC00643Q86TS7 51 aa5.49□□□□□ -1.53
PTPRN-205ENST00000440552 HIST1H4AP62805 103 aaKnown RBP5.48□□□□□ -1.53
PTPRN-205ENST00000440552 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
PTPRN-205ENST00000440552 MP68P56378 58 aa5.44□□□□□ -1.54
PTPRN-205ENST00000440552 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
PTPRN-205ENST00000440552 DMAC1Q96GE9 116 aa5.42□□□□□ -1.54
PTPRN-205ENST00000440552 MT-ATP8P03928 68 aa5.41□□□□□ -1.54
PTPRN-205ENST00000440552 OCR1Q9BZK8 76 aa5.39□□□□□ -1.55
PTPRN-205ENST00000440552 KRTAP19-3Q7Z4W3 81 aa5.35□□□□□ -1.55
PTPRN-205ENST00000440552 H3BPC8 53 aa5.34□□□□□ -1.55
PTPRN-205ENST00000440552 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
PTPRN-205ENST00000440552 ANAPC13Q9BS18 74 aa5.34□□□□□ -1.55
PTPRN-205ENST00000440552 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
PTPRN-205ENST00000440552 TRAV7A0A075B6U4 112 aa5.31□□□□□ -1.56
PTPRN-205ENST00000440552 MT1EP04732 61 aa5.31□□□□□ -1.56
PTPRN-205ENST00000440552 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
PTPRN-205ENST00000440552 SMIM20Q8N5G0 67 aa5.31□□□□□ -1.56
PTPRN-205ENST00000440552 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
PTPRN-205ENST00000440552 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
PTPRN-205ENST00000440552 SPTSSBQ8NFR3 76 aa5.23□□□□□ -1.57
PTPRN-205ENST00000440552 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
PTPRN-205ENST00000440552 SERP2Q8N6R1 65 aa5.22□□□□□ -1.57
PTPRN-205ENST00000440552 ACYP2P14621 99 aa5.21□□□□□ -1.58
PTPRN-205ENST00000440552 COX7CP15954 63 aa5.21□□□□□ -1.58
PTPRN-205ENST00000440552 MT1GP13640 62 aa5.19□□□□□ -1.58
PTPRN-205ENST00000440552 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
PTPRN-205ENST00000440552 MT4P47944 62 aa5.18□□□□□ -1.58
PTPRN-205ENST00000440552 KRTAP5-10Q6L8G5 202 aa5.14□□□□□ -1.59
PTPRN-205ENST00000440552 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
PTPRN-205ENST00000440552 CCDC179H3BU77 68 aa5.12□□□□□ -1.59
PTPRN-205ENST00000440552 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
PTPRN-205ENST00000440552 TMEM258P61165 79 aa5.1□□□□□ -1.59
PTPRN-205ENST00000440552 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
PTPRN-205ENST00000440552 CHKB-CPT1BH3BT56 60 aa5.08□□□□□ -1.6
PTPRN-205ENST00000440552 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
PTPRN-205ENST00000440552 MT1MQ8N339 61 aa5.08□□□□□ -1.6
PTPRN-205ENST00000440552 ATP5EP56381 51 aaPredicted RBP5.07□□□□□ -1.6
PTPRN-205ENST00000440552 A0A0D9SG42 100 aa5.06□□□□□ -1.6
PTPRN-205ENST00000440552 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
PTPRN-205ENST00000440552 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
PTPRN-205ENST00000440552 MT1LQ93083 61 aa5.01□□□□□ -1.61
PTPRN-205ENST00000440552 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
PTPRN-205ENST00000440552 H7BZZ5 65 aa4.97□□□□□ -1.61
PTPRN-205ENST00000440552 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
PTPRN-205ENST00000440552 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
PTPRN-205ENST00000440552 SERP1Q9Y6X1 66 aa4.93□□□□□ -1.62
PTPRN-205ENST00000440552 SNURFQ9Y675 71 aa4.9□□□□□ -1.63
PTPRN-205ENST00000440552 SPANXA2-OT1Q8N9U9 137 aa4.89□□□□□ -1.63
PTPRN-205ENST00000440552 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms