RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
PTPRJ-202ENST00000440289 KIAA1109Q2LD37 5005 aa9.61□□□□□ -0.87
PTPRJ-202ENST00000440289 H3BS24 57 aa9.58□□□□□ -0.88
PTPRJ-202ENST00000440289 KRTAP25-1Q3LHN0 102 aa9.55□□□□□ -0.88
PTPRJ-202ENST00000440289 RPS29P62273 56 aaKnown RBP9.55□□□□□ -0.88
PTPRJ-202ENST00000440289 LPAP08519 4548 aa9.55□□□□□ -0.88
PTPRJ-202ENST00000440289 KRTAP10-4P60372 401 aaPredicted RBP9.53□□□□□ -0.88
PTPRJ-202ENST00000440289 KRTAP17-1Q9BYP8 105 aa9.47□□□□□ -0.89
PTPRJ-202ENST00000440289 KRTAP10-8P60410 259 aa9.47□□□□□ -0.89
PTPRJ-202ENST00000440289 TNXBP22105 4242 aa9.45□□□□□ -0.9
PTPRJ-202ENST00000440289 KRTAP13-4Q3LI77 160 aa9.44□□□□□ -0.9
PTPRJ-202ENST00000440289 C10orf95Q9H7T3 257 aa9.43□□□□□ -0.9
PTPRJ-202ENST00000440289 SPINT4Q6UDR6 99 aa9.42□□□□□ -0.9
PTPRJ-202ENST00000440289 RYR1P21817 5038 aa9.4□□□□□ -0.9
PTPRJ-202ENST00000440289 P0C880 135 aa9.39□□□□□ -0.91
PTPRJ-202ENST00000440289 RPL37P61927 97 aaKnown RBP9.39□□□□□ -0.91
PTPRJ-202ENST00000440289 S4R3F8 94 aa9.39□□□□□ -0.91
PTPRJ-202ENST00000440289 Q5VSD8 79 aa9.39□□□□□ -0.91
PTPRJ-202ENST00000440289 LRP2P98164 4655 aa9.38□□□□□ -0.91
PTPRJ-202ENST00000440289 EPPK1P58107 5090 aaKnown RBP9.37□□□□□ -0.91
PTPRJ-202ENST00000440289 ROMO1P60602 79 aa9.35□□□□□ -0.91
PTPRJ-202ENST00000440289 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
PTPRJ-202ENST00000440289 KRTAP3-3Q9BYR6 98 aa9.32□□□□□ -0.92
PTPRJ-202ENST00000440289 XP32Q5T750 250 aa9.31□□□□□ -0.92
PTPRJ-202ENST00000440289 ABCA13Q86UQ4 5058 aa9.3□□□□□ -0.92
PTPRJ-202ENST00000440289 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
PTPRJ-202ENST00000440289 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
PTPRJ-202ENST00000440289 KRTAP12-2P59991 146 aa9.17□□□□□ -0.94
PTPRJ-202ENST00000440289 MUC2Q02817 5179 aa9.05□□□□□ -0.96
PTPRJ-202ENST00000440289 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
PTPRJ-202ENST00000440289 MT1HL1P0DM35 61 aa8.98□□□□□ -0.97
PTPRJ-202ENST00000440289 M0QZ58 72 aa8.98□□□□□ -0.97
PTPRJ-202ENST00000440289 KRTAP12-1P59990 96 aa8.96□□□□□ -0.97
PTPRJ-202ENST00000440289 NDUFAF8A1L188 74 aa8.96□□□□□ -0.98
PTPRJ-202ENST00000440289 R4GN34 69 aa8.9□□□□□ -0.98
PTPRJ-202ENST00000440289 HERC2O95714 4834 aa8.77□□□□□ -1
PTPRJ-202ENST00000440289 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
PTPRJ-202ENST00000440289 HERC1Q15751 4861 aa8.66□□□□□ -1.02
PTPRJ-202ENST00000440289 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
PTPRJ-202ENST00000440289 J3QL48 77 aa8.62□□□□□ -1.03
PTPRJ-202ENST00000440289 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
PTPRJ-202ENST00000440289 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
PTPRJ-202ENST00000440289 KRTAP4-1Q9BYQ7 146 aa8.57□□□□□ -1.04
PTPRJ-202ENST00000440289 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
PTPRJ-202ENST00000440289 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
PTPRJ-202ENST00000440289 RNF213Q63HN8 5207 aa8.47□□□□□ -1.05
PTPRJ-202ENST00000440289 PCLOQ9Y6V0 5065 aa8.44□□□□□ -1.06
PTPRJ-202ENST00000440289 PLAC4Q8WY50 150 aa8.41□□□□□ -1.06
PTPRJ-202ENST00000440289 BIRC6Q9NR09 4857 aa8.37□□□□□ -1.07
PTPRJ-202ENST00000440289 UBR4Q5T4S7 5183 aa8.23□□□□□ -1.09
PTPRJ-202ENST00000440289 LUZP6Q538Z0 58 aa8.2□□□□□ -1.1
PTPRJ-202ENST00000440289 HMCN2Q8NDA2 5059 aa8.12□□□□□ -1.11
PTPRJ-202ENST00000440289 M0R2T5 61 aa8.1□□□□□ -1.11
PTPRJ-202ENST00000440289 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
PTPRJ-202ENST00000440289 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
PTPRJ-202ENST00000440289 TNP1P09430 55 aa8.03□□□□□ -1.12
PTPRJ-202ENST00000440289 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
PTPRJ-202ENST00000440289 A0A0A0MQY5 61 aa7.8□□□□□ -1.16
PTPRJ-202ENST00000440289 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
PTPRJ-202ENST00000440289 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
PTPRJ-202ENST00000440289 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
PTPRJ-202ENST00000440289 USH2AO75445 5202 aa7.64□□□□□ -1.19
PTPRJ-202ENST00000440289 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
PTPRJ-202ENST00000440289 MT1HP80294 61 aa7.54□□□□□ -1.2
PTPRJ-202ENST00000440289 MT1FP04733 61 aa7.5□□□□□ -1.21
PTPRJ-202ENST00000440289 SPRR2GQ9BYE4 73 aa7.46□□□□□ -1.22
PTPRJ-202ENST00000440289 KMT2DO14686 5537 aa7.45□□□□□ -1.22
PTPRJ-202ENST00000440289 MT2AP02795 61 aa7.42□□□□□ -1.22
PTPRJ-202ENST00000440289 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
PTPRJ-202ENST00000440289 SPRR5A0A1B0GTR4 108 aa7.3□□□□□ -1.24
PTPRJ-202ENST00000440289 KRTAP23-1A1A580 65 aa7.3□□□□□ -1.24
PTPRJ-202ENST00000440289 FSIP2Q5CZC0 6907 aa7.3□□□□□ -1.24
PTPRJ-202ENST00000440289 KRTAP10-12P60413 245 aa7.22□□□□□ -1.25
PTPRJ-202ENST00000440289 KRTAP12-3P60328 96 aa7.2□□□□□ -1.26
PTPRJ-202ENST00000440289 KRTAP10-7P60409 375 aaPredicted RBP7.18□□□□□ -1.26
PTPRJ-202ENST00000440289 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
PTPRJ-202ENST00000440289 MT1XP80297 61 aa7.16□□□□□ -1.26
PTPRJ-202ENST00000440289 MT1BP07438 61 aa7.15□□□□□ -1.26
PTPRJ-202ENST00000440289 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
PTPRJ-202ENST00000440289 KRTAP19-8Q3LI54 63 aa7.02□□□□□ -1.29
PTPRJ-202ENST00000440289 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
PTPRJ-202ENST00000440289 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
PTPRJ-202ENST00000440289 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
PTPRJ-202ENST00000440289 LCE2BO14633 110 aa6.88□□□□□ -1.31
PTPRJ-202ENST00000440289 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
PTPRJ-202ENST00000440289 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
PTPRJ-202ENST00000440289 LCE2AQ5TA79 106 aaPredicted RBP6.75□□□□□ -1.33
PTPRJ-202ENST00000440289 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
PTPRJ-202ENST00000440289 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
PTPRJ-202ENST00000440289 INE1O15225 51 aa6.67□□□□□ -1.34
PTPRJ-202ENST00000440289 SSPOA2VEC9 5147 aa6.65□□□□□ -1.34
PTPRJ-202ENST00000440289 DSTQ03001 7570 aaKnown RBP6.56□□□□□ -1.36
PTPRJ-202ENST00000440289 KRTAP9-6A8MVA2 160 aa6.55□□□□□ -1.36
PTPRJ-202ENST00000440289 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
PTPRJ-202ENST00000440289 FCGBPQ9Y6R7 5405 aaPredicted RBP6.48□□□□□ -1.37
PTPRJ-202ENST00000440289 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
PTPRJ-202ENST00000440289 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
PTPRJ-202ENST00000440289 SYNE1Q8NF91 8797 aaKnown RBP6.27□□□□□ -1.41
PTPRJ-202ENST00000440289 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
PTPRJ-202ENST00000440289 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms