RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MDN1Q9NU22 5596 aa9□□□□□ -0.97
CPNE1-219ENST00000440240 A0A087WVE0 104 aa9□□□□□ -0.97
CPNE1-219ENST00000440240 TRAV22A0A0B4J277 110 aa8.99□□□□□ -0.97
CPNE1-219ENST00000440240 F8W1H4 67 aa8.96□□□□□ -0.98
CPNE1-219ENST00000440240 GTF2H5Q6ZYL4 71 aa8.96□□□□□ -0.98
CPNE1-219ENST00000440240 NDUFC1O43677 76 aa8.94□□□□□ -0.98
CPNE1-219ENST00000440240 H0YAA0 97 aa8.93□□□□□ -0.98
CPNE1-219ENST00000440240 ETDBQ3ZM63 59 aa8.93□□□□□ -0.98
CPNE1-219ENST00000440240 ATOX1O00244 68 aa8.85□□□□□ -0.99
CPNE1-219ENST00000440240 UQCRQO14949 82 aa8.84□□□□□ -0.99
CPNE1-219ENST00000440240 ACYP1P07311 99 aa8.82□□□□□ -1
CPNE1-219ENST00000440240 PRO2289Q9P1D8 64 aa8.82□□□□□ -1
CPNE1-219ENST00000440240 A8MUN3 132 aa8.8□□□□□ -1
CPNE1-219ENST00000440240 H0Y9P7 68 aa8.8□□□□□ -1
CPNE1-219ENST00000440240 ADM2Q7Z4H4 148 aa8.8□□□□□ -1
CPNE1-219ENST00000440240 KRTAP2-3P0C7H8 128 aa8.78□□□□□ -1
CPNE1-219ENST00000440240 KRTAP2-4Q9BYR9 128 aa8.78□□□□□ -1
CPNE1-219ENST00000440240 HIST1H4AP62805 103 aaKnown RBP8.77□□□□□ -1.01
CPNE1-219ENST00000440240 ATP5EP2Q5VTU8 51 aa8.77□□□□□ -1.01
CPNE1-219ENST00000440240 SPRR2FQ96RM1 72 aa8.74□□□□□ -1.01
CPNE1-219ENST00000440240 PLAC4Q8WY50 150 aa8.73□□□□□ -1.01
CPNE1-219ENST00000440240 FAM240AA0A1B0GVK7 77 aa8.71□□□□□ -1.02
CPNE1-219ENST00000440240 MT1XP80297 61 aa8.7□□□□□ -1.02
CPNE1-219ENST00000440240 SPRR2EP22531 72 aa8.68□□□□□ -1.02
CPNE1-219ENST00000440240 SPRR2BP35325 72 aa8.68□□□□□ -1.02
CPNE1-219ENST00000440240 SPRR2AP35326 72 aa8.68□□□□□ -1.02
CPNE1-219ENST00000440240 LINC00208Q96KT6 92 aa8.65□□□□□ -1.02
CPNE1-219ENST00000440240 KRTAP8-1Q8IUC2 63 aa8.63□□□□□ -1.03
CPNE1-219ENST00000440240 R4GN34 69 aa8.63□□□□□ -1.03
CPNE1-219ENST00000440240 C20orf197Q8N268 126 aa8.6□□□□□ -1.03
CPNE1-219ENST00000440240 PCP4L1A6NKN8 68 aa8.58□□□□□ -1.04
CPNE1-219ENST00000440240 MP68P56378 58 aa8.58□□□□□ -1.04
CPNE1-219ENST00000440240 KRTAP12-2P59991 146 aa8.58□□□□□ -1.04
CPNE1-219ENST00000440240 LINC00643Q86TS7 51 aa8.56□□□□□ -1.04
CPNE1-219ENST00000440240 P0C880 135 aa8.54□□□□□ -1.04
CPNE1-219ENST00000440240 LCE1AQ5T7P2 110 aa8.53□□□□□ -1.04
CPNE1-219ENST00000440240 M0QZ58 72 aa8.52□□□□□ -1.05
CPNE1-219ENST00000440240 OCR1Q9BZK8 76 aa8.51□□□□□ -1.05
CPNE1-219ENST00000440240 KRTAP2-2Q9BYT5 123 aa8.49□□□□□ -1.05
CPNE1-219ENST00000440240 KRTAP2-1Q9BYU5 128 aa8.49□□□□□ -1.05
CPNE1-219ENST00000440240 KRTAP4-8A0A0G2JLE6 195 aa8.42□□□□□ -1.06
CPNE1-219ENST00000440240 H3BPC8 53 aa8.42□□□□□ -1.06
CPNE1-219ENST00000440240 LINC01554Q52M75 96 aa8.42□□□□□ -1.06
CPNE1-219ENST00000440240 KRTAP4-8Q9BYQ9 185 aa8.42□□□□□ -1.06
CPNE1-219ENST00000440240 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
CPNE1-219ENST00000440240 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
CPNE1-219ENST00000440240 SPRR2DP22532 72 aa8.39□□□□□ -1.07
CPNE1-219ENST00000440240 KRTAP10-7P60409 375 aaPredicted RBP8.29□□□□□ -1.08
CPNE1-219ENST00000440240 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
CPNE1-219ENST00000440240 TRAV7A0A075B6U4 112 aa8.27□□□□□ -1.09
CPNE1-219ENST00000440240 SCGB1A1P11684 91 aa8.27□□□□□ -1.09
CPNE1-219ENST00000440240 MT-ATP8P03928 68 aa8.22□□□□□ -1.09
CPNE1-219ENST00000440240 ACYP2P14621 99 aa8.2□□□□□ -1.1
CPNE1-219ENST00000440240 LCE3BQ5TA77 95 aa8.19□□□□□ -1.1
CPNE1-219ENST00000440240 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
CPNE1-219ENST00000440240 J3QR89 54 aa8.14□□□□□ -1.11
CPNE1-219ENST00000440240 A0A1B0GV90 55 aa8.07□□□□□ -1.12
CPNE1-219ENST00000440240 CHKB-CPT1BH3BT56 60 aa8.03□□□□□ -1.12
CPNE1-219ENST00000440240 SMIM20Q8N5G0 67 aa7.97□□□□□ -1.13
CPNE1-219ENST00000440240 GPR98Q8WXG9 6306 aa7.95□□□□□ -1.14
CPNE1-219ENST00000440240 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
CPNE1-219ENST00000440240 DSTQ03001 7570 aaKnown RBP7.89□□□□□ -1.15
CPNE1-219ENST00000440240 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
CPNE1-219ENST00000440240 LCE5AQ5TCM9 118 aa7.81□□□□□ -1.16
CPNE1-219ENST00000440240 SNURFQ9Y675 71 aa7.8□□□□□ -1.16
CPNE1-219ENST00000440240 SPANXA2-OT1Q8N9U9 137 aa7.79□□□□□ -1.16
CPNE1-219ENST00000440240 KRTAP19-7Q3SYF9 63 aa7.78□□□□□ -1.16
CPNE1-219ENST00000440240 KRTAP19-3Q7Z4W3 81 aa7.75□□□□□ -1.17
CPNE1-219ENST00000440240 MT1EP04732 61 aa7.73□□□□□ -1.17
CPNE1-219ENST00000440240 KRTAP4-9Q9BYQ8 210 aa7.68□□□□□ -1.18
CPNE1-219ENST00000440240 K7ERU9 68 aa7.66□□□□□ -1.18
CPNE1-219ENST00000440240 SEC61GP60059 68 aa7.61□□□□□ -1.19
CPNE1-219ENST00000440240 A0A0D9SG42 100 aa7.6□□□□□ -1.19
CPNE1-219ENST00000440240 CYSTM1Q9H1C7 97 aa7.59□□□□□ -1.19
CPNE1-219ENST00000440240 SERP1Q9Y6X1 66 aa7.59□□□□□ -1.19
CPNE1-219ENST00000440240 MT1GP13640 62 aa7.57□□□□□ -1.2
CPNE1-219ENST00000440240 SERP2Q8N6R1 65 aa7.56□□□□□ -1.2
CPNE1-219ENST00000440240 COA5Q86WW8 74 aa7.55□□□□□ -1.2
CPNE1-219ENST00000440240 SPINT4Q6UDR6 99 aa7.53□□□□□ -1.2
CPNE1-219ENST00000440240 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.21
CPNE1-219ENST00000440240 PP632Q6XCG6 107 aa7.52□□□□□ -1.21
CPNE1-219ENST00000440240 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
CPNE1-219ENST00000440240 A0A1B0GU33 70 aa7.48□□□□□ -1.21
CPNE1-219ENST00000440240 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
CPNE1-219ENST00000440240 KRTAP12-1P59990 96 aa7.43□□□□□ -1.22
CPNE1-219ENST00000440240 LCE4AQ5TA78 99 aa7.43□□□□□ -1.22
CPNE1-219ENST00000440240 HMCN1Q96RW7 5635 aa7.4□□□□□ -1.23
CPNE1-219ENST00000440240 MT1MQ8N339 61 aa7.38□□□□□ -1.23
CPNE1-219ENST00000440240 MT4P47944 62 aa7.36□□□□□ -1.23
CPNE1-219ENST00000440240 MT1LQ93083 61 aa7.35□□□□□ -1.23
CPNE1-219ENST00000440240 SMIM26A0A096LP01 95 aa7.29□□□□□ -1.24
CPNE1-219ENST00000440240 PCP4P48539 62 aa7.29□□□□□ -1.24
CPNE1-219ENST00000440240 COX7CP15954 63 aa7.23□□□□□ -1.25
CPNE1-219ENST00000440240 C10orf95Q9H7T3 257 aa7.23□□□□□ -1.25
CPNE1-219ENST00000440240 KRTAP5-4Q6L8H1 288 aa7.22□□□□□ -1.25
CPNE1-219ENST00000440240 A0A1B0GU69 56 aa7.21□□□□□ -1.26
CPNE1-219ENST00000440240 TNP1P09430 55 aa7.21□□□□□ -1.26
CPNE1-219ENST00000440240 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
CPNE1-219ENST00000440240 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
CPNE1-219ENST00000440240 AHNAK2Q8IVF2 5795 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms