RNA–Protein interactions for RNA: ENST00000439790.5

LINC00460-202, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best)

Gene LINC00460, Length 497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-202ENST00000439790 LRP1Q07954 4544 aaKnown RBP4.17□□□□□ -1.74
LINC00460-202ENST00000439790 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
LINC00460-202ENST00000439790 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
LINC00460-202ENST00000439790 ZNF861PO60384 105 aa4.15□□□□□ -1.75
LINC00460-202ENST00000439790 CSAG1Q6PB30 78 aa4.15□□□□□ -1.75
LINC00460-202ENST00000439790 SSBP3-AS1Q7Z2R9 100 aa4.15□□□□□ -1.75
LINC00460-202ENST00000439790 FLG2Q5D862 2391 aaPredicted RBP4.15□□□□□ -1.75
LINC00460-202ENST00000439790 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
LINC00460-202ENST00000439790 PKHD1L1Q86WI1 4243 aa4.13□□□□□ -1.75
LINC00460-202ENST00000439790 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
LINC00460-202ENST00000439790 NUPR2A6NF83 97 aa4.12□□□□□ -1.75
LINC00460-202ENST00000439790 K7ERS5 55 aa4.12□□□□□ -1.75
LINC00460-202ENST00000439790 ROMO1P60602 79 aa4.12□□□□□ -1.75
LINC00460-202ENST00000439790 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
LINC00460-202ENST00000439790 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
LINC00460-202ENST00000439790 CHTF8P0CG12 524 aa4.11□□□□□ -1.75
LINC00460-202ENST00000439790 C1orf134Q5TEV5 83 aa4.11□□□□□ -1.75
LINC00460-202ENST00000439790 Q5W150 140 aa4.11□□□□□ -1.75
LINC00460-202ENST00000439790 MUC2Q02817 5179 aa4.1□□□□□ -1.75
LINC00460-202ENST00000439790 ANAPC11Q9NYG5 84 aa4.1□□□□□ -1.75
LINC00460-202ENST00000439790 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
LINC00460-202ENST00000439790 ADM2Q7Z4H4 148 aa4.09□□□□□ -1.75
LINC00460-202ENST00000439790 UBE2DNLQ8IWF7 75 aa4.09□□□□□ -1.75
LINC00460-202ENST00000439790 SPACA4Q8TDM5 124 aa4.09□□□□□ -1.75
LINC00460-202ENST00000439790 IGLV5-52A0A0A0MRZ9 124 aa4.07□□□□□ -1.76
LINC00460-202ENST00000439790 A8MUU9 505 aa4.06□□□□□ -1.76
LINC00460-202ENST00000439790 KRTAP11-1Q8IUC1 163 aa4.06□□□□□ -1.76
LINC00460-202ENST00000439790 TNXBP22105 4242 aa4.04□□□□□ -1.76
LINC00460-202ENST00000439790 DNAH8Q96JB1 4490 aa4.04□□□□□ -1.76
LINC00460-202ENST00000439790 APLNQ9ULZ1 77 aa4.03□□□□□ -1.76
LINC00460-202ENST00000439790 Q5VSD8 79 aa4.02□□□□□ -1.77
LINC00460-202ENST00000439790 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
LINC00460-202ENST00000439790 NBDYA0A0U1RRE5 68 aa4.01□□□□□ -1.77
LINC00460-202ENST00000439790 PANO1I0J062 215 aa4.01□□□□□ -1.77
LINC00460-202ENST00000439790 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
LINC00460-202ENST00000439790 PSORS1C2Q9UIG4 136 aa4.01□□□□□ -1.77
LINC00460-202ENST00000439790 A0A1B0GU33 70 aa4□□□□□ -1.77
LINC00460-202ENST00000439790 SPINK6Q6UWN8 80 aa4□□□□□ -1.77
LINC00460-202ENST00000439790 LINC00304Q8N9R0 145 aa3.99□□□□□ -1.77
LINC00460-202ENST00000439790 Q6ZRN7 208 aaPredicted RBP3.98□□□□□ -1.77
LINC00460-202ENST00000439790 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
LINC00460-202ENST00000439790 CIRBP-AS1Q8TBR5 109 aa3.97□□□□□ -1.77
LINC00460-202ENST00000439790 Q6ZSA8 131 aa3.96□□□□□ -1.78
LINC00460-202ENST00000439790 RPS29P62273 56 aaKnown RBP3.95□□□□□ -1.78
LINC00460-202ENST00000439790 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
LINC00460-202ENST00000439790 A0A087WTM6 91 aa3.94□□□□□ -1.78
LINC00460-202ENST00000439790 SMR3BP02814 79 aaPredicted RBP3.94□□□□□ -1.78
LINC00460-202ENST00000439790 H1FX-AS1Q4G0G2 97 aa3.94□□□□□ -1.78
LINC00460-202ENST00000439790 LPAP08519 4548 aa3.92□□□□□ -1.78
LINC00460-202ENST00000439790 H0YAA0 97 aa3.91□□□□□ -1.78
LINC00460-202ENST00000439790 SPINK1P00995 79 aa3.9□□□□□ -1.79
LINC00460-202ENST00000439790 KRTAP23-1A1A580 65 aa3.87□□□□□ -1.79
LINC00460-202ENST00000439790 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
LINC00460-202ENST00000439790 KRTAP10-1P60331 282 aa3.86□□□□□ -1.79
LINC00460-202ENST00000439790 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
LINC00460-202ENST00000439790 P0C880 135 aa3.85□□□□□ -1.79
LINC00460-202ENST00000439790 SPINT4Q6UDR6 99 aa3.84□□□□□ -1.79
LINC00460-202ENST00000439790 C20orf166-AS1Q96NR2 134 aa3.84□□□□□ -1.79
LINC00460-202ENST00000439790 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
LINC00460-202ENST00000439790 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
LINC00460-202ENST00000439790 KRTAP13-2Q52LG2 175 aa3.81□□□□□ -1.8
LINC00460-202ENST00000439790 MT1HL1P0DM35 61 aa3.78□□□□□ -1.8
LINC00460-202ENST00000439790 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
LINC00460-202ENST00000439790 KRTAP10-4P60372 401 aaPredicted RBP3.77□□□□□ -1.81
LINC00460-202ENST00000439790 KRTAP1-4P0C5Y4 121 aa3.75□□□□□ -1.81
LINC00460-202ENST00000439790 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
LINC00460-202ENST00000439790 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
LINC00460-202ENST00000439790 TPRXLQ17RH7 258 aa3.69□□□□□ -1.82
LINC00460-202ENST00000439790 M0QZ58 72 aa3.66□□□□□ -1.82
LINC00460-202ENST00000439790 KRTAP10-6P60371 365 aaPredicted RBP3.65□□□□□ -1.83
LINC00460-202ENST00000439790 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
LINC00460-202ENST00000439790 S4R3F8 94 aa3.63□□□□□ -1.83
LINC00460-202ENST00000439790 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
LINC00460-202ENST00000439790 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
LINC00460-202ENST00000439790 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
LINC00460-202ENST00000439790 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
LINC00460-202ENST00000439790 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
LINC00460-202ENST00000439790 A0A0D9SG42 100 aa3.55□□□□□ -1.84
LINC00460-202ENST00000439790 C9orf92A6NGG3 77 aa3.55□□□□□ -1.84
LINC00460-202ENST00000439790 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
LINC00460-202ENST00000439790 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
LINC00460-202ENST00000439790 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
LINC00460-202ENST00000439790 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
LINC00460-202ENST00000439790 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
LINC00460-202ENST00000439790 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
LINC00460-202ENST00000439790 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
LINC00460-202ENST00000439790 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
LINC00460-202ENST00000439790 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
LINC00460-202ENST00000439790 USH2AO75445 5202 aa3.46□□□□□ -1.86
LINC00460-202ENST00000439790 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
LINC00460-202ENST00000439790 FCGBPQ9Y6R7 5405 aaPredicted RBP3.43□□□□□ -1.86
LINC00460-202ENST00000439790 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
LINC00460-202ENST00000439790 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
LINC00460-202ENST00000439790 NEBP20929 6669 aa3.38□□□□□ -1.87
LINC00460-202ENST00000439790 R4GN34 69 aa3.35□□□□□ -1.87
LINC00460-202ENST00000439790 INE1O15225 51 aa3.32□□□□□ -1.88
LINC00460-202ENST00000439790 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
LINC00460-202ENST00000439790 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
LINC00460-202ENST00000439790 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
LINC00460-202ENST00000439790 MT1HP80294 61 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms