RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 LRP1Q07954 4544 aaKnown RBP6.46□□□□□ -1.38
SLC38A1-202ENST00000439706 KRTAP10-6P60371 365 aaPredicted RBP6.41□□□□□ -1.38
SLC38A1-202ENST00000439706 KRTAP10-8P60410 259 aa6.4□□□□□ -1.39
SLC38A1-202ENST00000439706 SACSQ9NZJ4 4579 aa6.39□□□□□ -1.39
SLC38A1-202ENST00000439706 HSPG2P98160 4391 aa6.38□□□□□ -1.39
SLC38A1-202ENST00000439706 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
SLC38A1-202ENST00000439706 S4R3F8 94 aa6.35□□□□□ -1.39
SLC38A1-202ENST00000439706 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
SLC38A1-202ENST00000439706 FAT3Q8TDW7 4589 aa6.34□□□□□ -1.39
SLC38A1-202ENST00000439706 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.4
SLC38A1-202ENST00000439706 APOBP04114 4563 aaKnown RBP6.33□□□□□ -1.4
SLC38A1-202ENST00000439706 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
SLC38A1-202ENST00000439706 LPAP08519 4548 aa6.28□□□□□ -1.4
SLC38A1-202ENST00000439706 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
SLC38A1-202ENST00000439706 XP32Q5T750 250 aa6.19□□□□□ -1.42
SLC38A1-202ENST00000439706 KRTAP10-4P60372 401 aaPredicted RBP6.19□□□□□ -1.42
SLC38A1-202ENST00000439706 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
SLC38A1-202ENST00000439706 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
SLC38A1-202ENST00000439706 LRP2P98164 4655 aa6.17□□□□□ -1.42
SLC38A1-202ENST00000439706 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
SLC38A1-202ENST00000439706 KRTAP21-3Q3LHN1 58 aa6.11□□□□□ -1.43
SLC38A1-202ENST00000439706 M0QZ58 72 aa6.11□□□□□ -1.43
SLC38A1-202ENST00000439706 Q5VSD8 79 aa6.09□□□□□ -1.43
SLC38A1-202ENST00000439706 A0A1B0GVY2 172 aa6.06□□□□□ -1.44
SLC38A1-202ENST00000439706 RYR1P21817 5038 aa6.05□□□□□ -1.44
SLC38A1-202ENST00000439706 R4GN34 69 aa6.05□□□□□ -1.44
SLC38A1-202ENST00000439706 TNXBP22105 4242 aa6.02□□□□□ -1.45
SLC38A1-202ENST00000439706 KIAA1109Q2LD37 5005 aa6.02□□□□□ -1.45
SLC38A1-202ENST00000439706 RYR2Q92736 4967 aa5.94□□□□□ -1.46
SLC38A1-202ENST00000439706 PLAC4Q8WY50 150 aa5.93□□□□□ -1.46
SLC38A1-202ENST00000439706 KRTAP17-1Q9BYP8 105 aa5.93□□□□□ -1.46
SLC38A1-202ENST00000439706 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
SLC38A1-202ENST00000439706 RYR3Q15413 4870 aa5.91□□□□□ -1.46
SLC38A1-202ENST00000439706 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.47
SLC38A1-202ENST00000439706 MUC2Q02817 5179 aa5.9□□□□□ -1.47
SLC38A1-202ENST00000439706 CAMK2N1Q7Z7J9 78 aa5.87□□□□□ -1.47
SLC38A1-202ENST00000439706 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
SLC38A1-202ENST00000439706 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
SLC38A1-202ENST00000439706 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
SLC38A1-202ENST00000439706 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
SLC38A1-202ENST00000439706 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.51
SLC38A1-202ENST00000439706 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
SLC38A1-202ENST00000439706 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
SLC38A1-202ENST00000439706 J3QL48 77 aa5.54□□□□□ -1.52
SLC38A1-202ENST00000439706 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
SLC38A1-202ENST00000439706 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
SLC38A1-202ENST00000439706 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
SLC38A1-202ENST00000439706 TNP1P09430 55 aa5.48□□□□□ -1.53
SLC38A1-202ENST00000439706 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
SLC38A1-202ENST00000439706 HERC2O95714 4834 aa5.4□□□□□ -1.55
SLC38A1-202ENST00000439706 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
SLC38A1-202ENST00000439706 M0R2T5 61 aa5.32□□□□□ -1.56
SLC38A1-202ENST00000439706 HERC1Q15751 4861 aa5.32□□□□□ -1.56
SLC38A1-202ENST00000439706 KRTAP19-2Q3LHN2 52 aa5.28□□□□□ -1.56
SLC38A1-202ENST00000439706 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
SLC38A1-202ENST00000439706 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
SLC38A1-202ENST00000439706 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
SLC38A1-202ENST00000439706 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
SLC38A1-202ENST00000439706 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
SLC38A1-202ENST00000439706 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
SLC38A1-202ENST00000439706 UBR4Q5T4S7 5183 aa5.09□□□□□ -1.59
SLC38A1-202ENST00000439706 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
SLC38A1-202ENST00000439706 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
SLC38A1-202ENST00000439706 KMT2DO14686 5537 aa4.99□□□□□ -1.61
SLC38A1-202ENST00000439706 USH2AO75445 5202 aa4.96□□□□□ -1.62
SLC38A1-202ENST00000439706 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
SLC38A1-202ENST00000439706 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
SLC38A1-202ENST00000439706 MT1FP04733 61 aa4.93□□□□□ -1.62
SLC38A1-202ENST00000439706 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
SLC38A1-202ENST00000439706 KRTAP12-3P60328 96 aa4.9□□□□□ -1.62
SLC38A1-202ENST00000439706 MT2AP02795 61 aa4.87□□□□□ -1.63
SLC38A1-202ENST00000439706 MT1HP80294 61 aa4.86□□□□□ -1.63
SLC38A1-202ENST00000439706 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
SLC38A1-202ENST00000439706 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
SLC38A1-202ENST00000439706 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
SLC38A1-202ENST00000439706 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
SLC38A1-202ENST00000439706 MT1XP80297 61 aa4.78□□□□□ -1.64
SLC38A1-202ENST00000439706 INE1O15225 51 aa4.77□□□□□ -1.65
SLC38A1-202ENST00000439706 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
SLC38A1-202ENST00000439706 MT1BP07438 61 aa4.73□□□□□ -1.65
SLC38A1-202ENST00000439706 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
SLC38A1-202ENST00000439706 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
SLC38A1-202ENST00000439706 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
SLC38A1-202ENST00000439706 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
SLC38A1-202ENST00000439706 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
SLC38A1-202ENST00000439706 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
SLC38A1-202ENST00000439706 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
SLC38A1-202ENST00000439706 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
SLC38A1-202ENST00000439706 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
SLC38A1-202ENST00000439706 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
SLC38A1-202ENST00000439706 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
SLC38A1-202ENST00000439706 LCE2BO14633 110 aa4.41□□□□□ -1.7
SLC38A1-202ENST00000439706 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
SLC38A1-202ENST00000439706 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
SLC38A1-202ENST00000439706 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
SLC38A1-202ENST00000439706 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
SLC38A1-202ENST00000439706 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
SLC38A1-202ENST00000439706 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
SLC38A1-202ENST00000439706 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.73
SLC38A1-202ENST00000439706 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms