RNA–Protein interactions for RNA: ENST00000439519.1

PDK1-207, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 4

Gene PDK1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-207ENST00000439519 DEFB110Q30KQ9 67 aa0.2□□□□□ -2.38
PDK1-207ENST00000439519 RANBP2P49792 3224 aaKnown RBP0.2□□□□□ -2.38
PDK1-207ENST00000439519 TGP01266 2768 aa0.19□□□□□ -2.38
PDK1-207ENST00000439519 DNAH7Q8WXX0 4024 aa0.18□□□□□ -2.38
PDK1-207ENST00000439519 NBPF19A0A087WUL8 3843 aa0.18□□□□□ -2.38
PDK1-207ENST00000439519 DNAH1Q9P2D7 4330 aa0.18□□□□□ -2.38
PDK1-207ENST00000439519 KRTAP8-1Q8IUC2 63 aa0.18□□□□□ -2.38
PDK1-207ENST00000439519 DNAH8Q96JB1 4490 aa0.18□□□□□ -2.38
PDK1-207ENST00000439519 FAM186AA6NE01 2351 aa0.18□□□□□ -2.38
PDK1-207ENST00000439519 CHD7Q9P2D1 2997 aa0.18□□□□□ -2.38
PDK1-207ENST00000439519 LRP2P98164 4655 aa0.17□□□□□ -2.38
PDK1-207ENST00000439519 LAMA5O15230 3695 aa0.17□□□□□ -2.38
PDK1-207ENST00000439519 AKAP9Q99996 3911 aa0.17□□□□□ -2.38
PDK1-207ENST00000439519 SPRR2FQ96RM1 72 aa0.17□□□□□ -2.38
PDK1-207ENST00000439519 RIF1Q5UIP0 2472 aaKnown RBP0.16□□□□□ -2.38
PDK1-207ENST00000439519 SPTBN5Q9NRC6 3674 aaKnown RBP0.16□□□□□ -2.38
PDK1-207ENST00000439519 LAMA1P25391 3075 aa0.16□□□□□ -2.38
PDK1-207ENST00000439519 FAT1Q14517 4588 aa0.16□□□□□ -2.38
PDK1-207ENST00000439519 RPL39LQ96EH5 51 aaKnown RBP0.16□□□□□ -2.38
PDK1-207ENST00000439519 EPG5Q9HCE0 2579 aa0.16□□□□□ -2.38
PDK1-207ENST00000439519 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
PDK1-207ENST00000439519 ANKHD1Q8IWZ3 2542 aaKnown RBP0.15□□□□□ -2.39
PDK1-207ENST00000439519 FASNP49327 2511 aaKnown RBP0.15□□□□□ -2.39
PDK1-207ENST00000439519 KRTAP19-5Q3LI72 72 aa0.14□□□□□ -2.39
PDK1-207ENST00000439519 TRIOO75962 3097 aa0.13□□□□□ -2.39
PDK1-207ENST00000439519 ACACBO00763 2458 aa0.13□□□□□ -2.39
PDK1-207ENST00000439519 MYO18BQ8IUG5 2567 aa0.13□□□□□ -2.39
PDK1-207ENST00000439519 STAB2Q8WWQ8 2551 aa0.13□□□□□ -2.39
PDK1-207ENST00000439519 MXRA5Q9NR99 2828 aa0.12□□□□□ -2.39
PDK1-207ENST00000439519 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
PDK1-207ENST00000439519 DNAH10Q8IVF4 4471 aa0.12□□□□□ -2.39
PDK1-207ENST00000439519 TEP1Q99973 2627 aaKnown RBP0.12□□□□□ -2.39
PDK1-207ENST00000439519 ZFHX4Q86UP3 3567 aa0.11□□□□□ -2.39
PDK1-207ENST00000439519 CELSR3Q9NYQ7 3312 aa0.11□□□□□ -2.39
PDK1-207ENST00000439519 MUC2Q02817 5179 aa0.11□□□□□ -2.39
PDK1-207ENST00000439519 WDR87Q6ZQQ6 2873 aa0.11□□□□□ -2.39
PDK1-207ENST00000439519 SMR3BP02814 79 aaPredicted RBP0.11□□□□□ -2.39
PDK1-207ENST00000439519 SPART-AS1P0CW21 52 aa0.1□□□□□ -2.39
PDK1-207ENST00000439519 LEAP2Q969E1 77 aa0.1□□□□□ -2.39
PDK1-207ENST00000439519 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
PDK1-207ENST00000439519 TOMM7Q9P0U1 55 aa0.1□□□□□ -2.39
PDK1-207ENST00000439519 CCDC168Q8NDH2 2452 aa0.08□□□□□ -2.4
PDK1-207ENST00000439519 PLECQ15149 4684 aaKnown RBP0.08□□□□□ -2.4
PDK1-207ENST00000439519 RELNP78509 3460 aa0.06□□□□□ -2.4
PDK1-207ENST00000439519 ARHGAP5-AS1Q96IT6 56 aa0.06□□□□□ -2.4
PDK1-207ENST00000439519 ITPR1Q14643 2758 aa0.06□□□□□ -2.4
PDK1-207ENST00000439519 CMYA5Q8N3K9 4069 aa0.06□□□□□ -2.4
PDK1-207ENST00000439519 ITPR3Q14573 2671 aa0.05□□□□□ -2.4
PDK1-207ENST00000439519 ADGRG4Q8IZF6 3080 aa0.05□□□□□ -2.4
PDK1-207ENST00000439519 MGAM2Q2M2H8 2515 aa0.05□□□□□ -2.4
PDK1-207ENST00000439519 DYNC1H1Q14204 4646 aaKnown RBP0.04□□□□□ -2.4
PDK1-207ENST00000439519 CRYBG3Q68DQ2 2970 aa0.04□□□□□ -2.4
PDK1-207ENST00000439519 LINC01590Q5TEZ4 76 aa0.04□□□□□ -2.4
PDK1-207ENST00000439519 CSMD1Q96PZ7 3565 aa0.04□□□□□ -2.4
PDK1-207ENST00000439519 USP9YO00507 2555 aaPredicted RBP0.03□□□□□ -2.4
PDK1-207ENST00000439519 USP9XQ93008 2570 aaPredicted RBP0.03□□□□□ -2.4
PDK1-207ENST00000439519 HERC1Q15751 4861 aa0.03□□□□□ -2.4
PDK1-207ENST00000439519 TLN2Q9Y4G6 2542 aa0.03□□□□□ -2.41
PDK1-207ENST00000439519 TRRAPQ9Y4A5 3859 aa0.02□□□□□ -2.41
PDK1-207ENST00000439519 KMT2CQ8NEZ4 4911 aaKnown RBP0.01□□□□□ -2.41
PDK1-207ENST00000439519 MUC17Q685J3 4493 aa0.01□□□□□ -2.41
PDK1-207ENST00000439519 DNAH17Q9UFH2 4485 aa0.01□□□□□ -2.41
PDK1-207ENST00000439519 DEFB1P60022 68 aa0□□□□□ -2.41
PDK1-207ENST00000439519 MT1HP80294 61 aa-0.01□□□□□ -2.41
PDK1-207ENST00000439519 STARD9Q9P2P6 4700 aa-0.02□□□□□ -2.41
PDK1-207ENST00000439519 PRCDQ00LT1 54 aa-0.02□□□□□ -2.41
PDK1-207ENST00000439519 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
PDK1-207ENST00000439519 DEFB104AQ8WTQ1 72 aa-0.03□□□□□ -2.41
PDK1-207ENST00000439519 MGAQ8IWI9 3026 aa-0.03□□□□□ -2.41
PDK1-207ENST00000439519 DNAH5Q8TE73 4624 aa-0.04□□□□□ -2.42
PDK1-207ENST00000439519 PCLOQ9Y6V0 5065 aa-0.04□□□□□ -2.42
PDK1-207ENST00000439519 LAMA3Q16787 3333 aa-0.04□□□□□ -2.42
PDK1-207ENST00000439519 DMXL2Q8TDJ6 3036 aa-0.05□□□□□ -2.42
PDK1-207ENST00000439519 MT1EP04732 61 aa-0.05□□□□□ -2.42
PDK1-207ENST00000439519 K7EIM0 57 aa-0.06□□□□□ -2.42
PDK1-207ENST00000439519 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
PDK1-207ENST00000439519 TTTY10Q9BZA0 68 aa-0.06□□□□□ -2.42
PDK1-207ENST00000439519 SMG1Q96Q15 3661 aaKnown RBP-0.07□□□□□ -2.42
PDK1-207ENST00000439519 C5orf42Q9H799 3197 aa-0.08□□□□□ -2.42
PDK1-207ENST00000439519 USH2AO75445 5202 aa-0.08□□□□□ -2.42
PDK1-207ENST00000439519 UBR4Q5T4S7 5183 aa-0.09□□□□□ -2.42
PDK1-207ENST00000439519 DEFB136Q30KP8 78 aa-0.09□□□□□ -2.42
PDK1-207ENST00000439519 KRTAP19-8Q3LI54 63 aa-0.09□□□□□ -2.42
PDK1-207ENST00000439519 MT1LQ93083 61 aa-0.09□□□□□ -2.42
PDK1-207ENST00000439519 CFAP54Q96N23 3096 aa-0.09□□□□□ -2.42
PDK1-207ENST00000439519 DNHD1Q96M86 4753 aa-0.1□□□□□ -2.42
PDK1-207ENST00000439519 LRBAP50851 2863 aa-0.1□□□□□ -2.43
PDK1-207ENST00000439519 SRCAPQ6ZRS2 3230 aa-0.1□□□□□ -2.43
PDK1-207ENST00000439519 RHPN1-AS1Q9BWJ2 59 aa-0.11□□□□□ -2.43
PDK1-207ENST00000439519 RNF213Q63HN8 5207 aa-0.12□□□□□ -2.43
PDK1-207ENST00000439519 VPS13CQ709C8 3753 aa-0.12□□□□□ -2.43
PDK1-207ENST00000439519 MT1XP80297 61 aa-0.12□□□□□ -2.43
PDK1-207ENST00000439519 TEX15Q9BXT5 2789 aa-0.12□□□□□ -2.43
PDK1-207ENST00000439519 SPTAN1Q13813 2472 aaKnown RBP-0.13□□□□□ -2.43
PDK1-207ENST00000439519 H3BSH0 61 aa-0.13□□□□□ -2.43
PDK1-207ENST00000439519 RYR1P21817 5038 aa-0.13□□□□□ -2.43
PDK1-207ENST00000439519 RYR2Q92736 4967 aa-0.14□□□□□ -2.43
PDK1-207ENST00000439519 DMDP11532 3685 aa-0.15□□□□□ -2.43
PDK1-207ENST00000439519 ATMQ13315 3056 aa-0.15□□□□□ -2.43
PDK1-207ENST00000439519 TMEM167AQ8TBQ9 72 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms