RNA–Protein interactions for RNA: ENST00000439519.1

PDK1-207, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 4

Gene PDK1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-207ENST00000439519 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
PDK1-207ENST00000439519 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
PDK1-207ENST00000439519 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
PDK1-207ENST00000439519 SENP3Q9H4L4 574 aaPredicted RBP20.28■□□□□ 0.84
PDK1-207ENST00000439519 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
PDK1-207ENST00000439519 FOXD1Q16676 465 aa18.82■□□□□ 0.6
PDK1-207ENST00000439519 ADRA2BP18089 450 aa18.09■□□□□ 0.49
PDK1-207ENST00000439519 PPP6R1Q9UPN7 881 aa18.05■□□□□ 0.48
PDK1-207ENST00000439519 PIAS4Q8N2W9 510 aaPredicted RBP17.81■□□□□ 0.44
PDK1-207ENST00000439519 MSH5O43196 834 aa17.4■□□□□ 0.38
PDK1-207ENST00000439519 PPP4R3CPQ6ZMV5 832 aa16.61■□□□□ 0.25
PDK1-207ENST00000439519 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
PDK1-207ENST00000439519 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
PDK1-207ENST00000439519 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
PDK1-207ENST00000439519 KCNA4P22459 653 aa16.13■□□□□ 0.17
PDK1-207ENST00000439519 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
PDK1-207ENST00000439519 DMRT2Q9Y5R5 561 aa16.13■□□□□ 0.17
PDK1-207ENST00000439519 POTEDQ86YR6 584 aa16■□□□□ 0.15
PDK1-207ENST00000439519 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
PDK1-207ENST00000439519 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
PDK1-207ENST00000439519 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
PDK1-207ENST00000439519 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
PDK1-207ENST00000439519 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
PDK1-207ENST00000439519 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
PDK1-207ENST00000439519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDK1-207ENST00000439519 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
PDK1-207ENST00000439519 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
PDK1-207ENST00000439519 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
PDK1-207ENST00000439519 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
PDK1-207ENST00000439519 ZBTB22O15209 634 aa14.8□□□□□ -0.04
PDK1-207ENST00000439519 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
PDK1-207ENST00000439519 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
PDK1-207ENST00000439519 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
PDK1-207ENST00000439519 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
PDK1-207ENST00000439519 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
PDK1-207ENST00000439519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
PDK1-207ENST00000439519 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
PDK1-207ENST00000439519 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
PDK1-207ENST00000439519 APLP2Q06481 763 aa14.5□□□□□ -0.09
PDK1-207ENST00000439519 CAPN15O75808 1086 aa14.49□□□□□ -0.09
PDK1-207ENST00000439519 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
PDK1-207ENST00000439519 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
PDK1-207ENST00000439519 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
PDK1-207ENST00000439519 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
PDK1-207ENST00000439519 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
PDK1-207ENST00000439519 ABCB7O75027 752 aa14.21□□□□□ -0.13
PDK1-207ENST00000439519 DSG3P32926 999 aa14.14□□□□□ -0.15
PDK1-207ENST00000439519 POLA2Q14181 598 aa14.09□□□□□ -0.15
PDK1-207ENST00000439519 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
PDK1-207ENST00000439519 FBLN2P98095 1184 aa13.78□□□□□ -0.2
PDK1-207ENST00000439519 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
PDK1-207ENST00000439519 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
PDK1-207ENST00000439519 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
PDK1-207ENST00000439519 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
PDK1-207ENST00000439519 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
PDK1-207ENST00000439519 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
PDK1-207ENST00000439519 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
PDK1-207ENST00000439519 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
PDK1-207ENST00000439519 FKBP8Q14318 412 aa13.35□□□□□ -0.27
PDK1-207ENST00000439519 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
PDK1-207ENST00000439519 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
PDK1-207ENST00000439519 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDK1-207ENST00000439519 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
PDK1-207ENST00000439519 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
PDK1-207ENST00000439519 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
PDK1-207ENST00000439519 PITPNM1O00562 1244 aa13.06□□□□□ -0.32
PDK1-207ENST00000439519 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
PDK1-207ENST00000439519 PROM2Q8N271 834 aa12.98□□□□□ -0.33
PDK1-207ENST00000439519 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.33
PDK1-207ENST00000439519 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
PDK1-207ENST00000439519 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
PDK1-207ENST00000439519 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
PDK1-207ENST00000439519 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
PDK1-207ENST00000439519 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
PDK1-207ENST00000439519 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDK1-207ENST00000439519 MIER1Q8N108 512 aa12.76□□□□□ -0.37
PDK1-207ENST00000439519 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
PDK1-207ENST00000439519 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
PDK1-207ENST00000439519 POTEHQ6S545 545 aa12.68□□□□□ -0.38
PDK1-207ENST00000439519 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
PDK1-207ENST00000439519 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
PDK1-207ENST00000439519 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
PDK1-207ENST00000439519 FARP1Q9Y4F1 1045 aaPredicted RBP12.58□□□□□ -0.4
PDK1-207ENST00000439519 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
PDK1-207ENST00000439519 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
PDK1-207ENST00000439519 HAX1O00165 279 aa12.5□□□□□ -0.41
PDK1-207ENST00000439519 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
PDK1-207ENST00000439519 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
PDK1-207ENST00000439519 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
PDK1-207ENST00000439519 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
PDK1-207ENST00000439519 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
PDK1-207ENST00000439519 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
PDK1-207ENST00000439519 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
PDK1-207ENST00000439519 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
PDK1-207ENST00000439519 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
PDK1-207ENST00000439519 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
PDK1-207ENST00000439519 NUBP1P53384 320 aa12.32□□□□□ -0.44
PDK1-207ENST00000439519 EVX2Q03828 476 aa12.3□□□□□ -0.44
PDK1-207ENST00000439519 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
PDK1-207ENST00000439519 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms