RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
PCNX3-202ENST00000439247 KRTAP25-1Q3LHN0 102 aa7.32□□□□□ -1.24
PCNX3-202ENST00000439247 KRTAP10-4P60372 401 aaPredicted RBP7.3□□□□□ -1.24
PCNX3-202ENST00000439247 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
PCNX3-202ENST00000439247 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
PCNX3-202ENST00000439247 LRP1Q07954 4544 aaKnown RBP7.25□□□□□ -1.25
PCNX3-202ENST00000439247 ROMO1P60602 79 aa7.22□□□□□ -1.25
PCNX3-202ENST00000439247 PKHD1L1Q86WI1 4243 aa7.22□□□□□ -1.25
PCNX3-202ENST00000439247 MYCBP2O75592 4640 aa7.21□□□□□ -1.26
PCNX3-202ENST00000439247 DMBT1Q9UGM3 2413 aaPredicted RBP7.21□□□□□ -1.26
PCNX3-202ENST00000439247 Q5VSD8 79 aa7.21□□□□□ -1.26
PCNX3-202ENST00000439247 COX6B2Q6YFQ2 88 aa7.19□□□□□ -1.26
PCNX3-202ENST00000439247 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
PCNX3-202ENST00000439247 BIRC6Q9NR09 4857 aa7.12□□□□□ -1.27
PCNX3-202ENST00000439247 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
PCNX3-202ENST00000439247 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
PCNX3-202ENST00000439247 TNXBP22105 4242 aa7.12□□□□□ -1.27
PCNX3-202ENST00000439247 P0C880 135 aa7.11□□□□□ -1.27
PCNX3-202ENST00000439247 A0A0D9SG42 100 aa7.1□□□□□ -1.27
PCNX3-202ENST00000439247 SEC61BP60468 96 aaKnown RBP7.1□□□□□ -1.27
PCNX3-202ENST00000439247 ABCA13Q86UQ4 5058 aa7.08□□□□□ -1.28
PCNX3-202ENST00000439247 KRTAP13-4Q3LI77 160 aa7.08□□□□□ -1.28
PCNX3-202ENST00000439247 K7ERS5 55 aa7.08□□□□□ -1.28
PCNX3-202ENST00000439247 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
PCNX3-202ENST00000439247 HERC2O95714 4834 aa7.04□□□□□ -1.28
PCNX3-202ENST00000439247 KRTAP10-6P60371 365 aaPredicted RBP7.03□□□□□ -1.28
PCNX3-202ENST00000439247 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
PCNX3-202ENST00000439247 TPRXLQ17RH7 258 aa7.02□□□□□ -1.29
PCNX3-202ENST00000439247 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
PCNX3-202ENST00000439247 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
PCNX3-202ENST00000439247 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
PCNX3-202ENST00000439247 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
PCNX3-202ENST00000439247 PCLOQ9Y6V0 5065 aa6.9□□□□□ -1.3
PCNX3-202ENST00000439247 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
PCNX3-202ENST00000439247 S4R3F8 94 aa6.83□□□□□ -1.32
PCNX3-202ENST00000439247 LPAP08519 4548 aa6.82□□□□□ -1.32
PCNX3-202ENST00000439247 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
PCNX3-202ENST00000439247 NDUFAF8A1L188 74 aa6.8□□□□□ -1.32
PCNX3-202ENST00000439247 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
PCNX3-202ENST00000439247 HERC1Q15751 4861 aa6.76□□□□□ -1.33
PCNX3-202ENST00000439247 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
PCNX3-202ENST00000439247 XP32Q5T750 250 aa6.73□□□□□ -1.33
PCNX3-202ENST00000439247 KRTAP12-1P59990 96 aa6.73□□□□□ -1.33
PCNX3-202ENST00000439247 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
PCNX3-202ENST00000439247 LRP2P98164 4655 aa6.68□□□□□ -1.34
PCNX3-202ENST00000439247 LCE2BO14633 110 aa6.67□□□□□ -1.34
PCNX3-202ENST00000439247 KRTAP23-1A1A580 65 aa6.57□□□□□ -1.36
PCNX3-202ENST00000439247 HMCN2Q8NDA2 5059 aa6.56□□□□□ -1.36
PCNX3-202ENST00000439247 M0QZ58 72 aa6.48□□□□□ -1.37
PCNX3-202ENST00000439247 MUC2Q02817 5179 aa6.46□□□□□ -1.38
PCNX3-202ENST00000439247 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
PCNX3-202ENST00000439247 R4GN34 69 aa6.39□□□□□ -1.39
PCNX3-202ENST00000439247 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
PCNX3-202ENST00000439247 MUC17Q685J3 4493 aa6.34□□□□□ -1.39
PCNX3-202ENST00000439247 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
PCNX3-202ENST00000439247 KRTAP4-1Q9BYQ7 146 aa6.33□□□□□ -1.4
PCNX3-202ENST00000439247 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
PCNX3-202ENST00000439247 FAT4Q6V0I7 4981 aa6.18□□□□□ -1.42
PCNX3-202ENST00000439247 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
PCNX3-202ENST00000439247 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
PCNX3-202ENST00000439247 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
PCNX3-202ENST00000439247 PP632Q6XCG6 107 aa5.99□□□□□ -1.45
PCNX3-202ENST00000439247 MT1HP80294 61 aa5.85□□□□□ -1.47
PCNX3-202ENST00000439247 TNP1P09430 55 aa5.85□□□□□ -1.47
PCNX3-202ENST00000439247 M0R2T5 61 aa5.78□□□□□ -1.48
PCNX3-202ENST00000439247 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
PCNX3-202ENST00000439247 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
PCNX3-202ENST00000439247 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
PCNX3-202ENST00000439247 MT2AP02795 61 aa5.61□□□□□ -1.51
PCNX3-202ENST00000439247 MT1FP04733 61 aa5.6□□□□□ -1.51
PCNX3-202ENST00000439247 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.52
PCNX3-202ENST00000439247 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
PCNX3-202ENST00000439247 KRTAP10-10P60014 251 aa5.54□□□□□ -1.52
PCNX3-202ENST00000439247 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
PCNX3-202ENST00000439247 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
PCNX3-202ENST00000439247 USH2AO75445 5202 aa5.4□□□□□ -1.54
PCNX3-202ENST00000439247 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
PCNX3-202ENST00000439247 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
PCNX3-202ENST00000439247 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
PCNX3-202ENST00000439247 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
PCNX3-202ENST00000439247 MT1XP80297 61 aa5.28□□□□□ -1.56
PCNX3-202ENST00000439247 MT1BP07438 61 aa5.27□□□□□ -1.57
PCNX3-202ENST00000439247 KRTAP19-8Q3LI54 63 aa5.26□□□□□ -1.57
PCNX3-202ENST00000439247 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
PCNX3-202ENST00000439247 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
PCNX3-202ENST00000439247 INE1O15225 51 aa5.21□□□□□ -1.57
PCNX3-202ENST00000439247 SSPOA2VEC9 5147 aa5.16□□□□□ -1.58
PCNX3-202ENST00000439247 KMT2DO14686 5537 aa5.14□□□□□ -1.59
PCNX3-202ENST00000439247 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
PCNX3-202ENST00000439247 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
PCNX3-202ENST00000439247 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
PCNX3-202ENST00000439247 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
PCNX3-202ENST00000439247 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
PCNX3-202ENST00000439247 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
PCNX3-202ENST00000439247 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
PCNX3-202ENST00000439247 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
PCNX3-202ENST00000439247 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
PCNX3-202ENST00000439247 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
PCNX3-202ENST00000439247 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
PCNX3-202ENST00000439247 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms