RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 NREPQ16612 68 aa3.78□□□□□ -1.8
SMPD4-208ENST00000439029 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
SMPD4-208ENST00000439029 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
SMPD4-208ENST00000439029 BAALC-AS2P0C853 105 aa3.76□□□□□ -1.81
SMPD4-208ENST00000439029 ADM2Q7Z4H4 148 aa3.76□□□□□ -1.81
SMPD4-208ENST00000439029 HIST3H2BBQ8N257 126 aa3.76□□□□□ -1.81
SMPD4-208ENST00000439029 DLEU1O43261 78 aa3.75□□□□□ -1.81
SMPD4-208ENST00000439029 COX6CP09669 75 aa3.75□□□□□ -1.81
SMPD4-208ENST00000439029 HIGD1BQ9P298 99 aa3.75□□□□□ -1.81
SMPD4-208ENST00000439029 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
SMPD4-208ENST00000439029 CASC2Q6XLA1 102 aa3.74□□□□□ -1.81
SMPD4-208ENST00000439029 HIST1H2BLQ99880 126 aa3.74□□□□□ -1.81
SMPD4-208ENST00000439029 CXCL6P80162 114 aa3.73□□□□□ -1.81
SMPD4-208ENST00000439029 Q8N9L7 120 aa3.73□□□□□ -1.81
SMPD4-208ENST00000439029 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
SMPD4-208ENST00000439029 LOC110117498A0A087WWA1 95 aa3.71□□□□□ -1.82
SMPD4-208ENST00000439029 C14orf132Q9NPU4 83 aa3.71□□□□□ -1.82
SMPD4-208ENST00000439029 A0A1B0GW54 56 aa3.7□□□□□ -1.82
SMPD4-208ENST00000439029 H0YAA0 97 aa3.7□□□□□ -1.82
SMPD4-208ENST00000439029 S100A2P29034 98 aa3.7□□□□□ -1.82
SMPD4-208ENST00000439029 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
SMPD4-208ENST00000439029 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
SMPD4-208ENST00000439029 LINC01554Q52M75 96 aa3.68□□□□□ -1.82
SMPD4-208ENST00000439029 CYSTM1Q9H1C7 97 aa3.68□□□□□ -1.82
SMPD4-208ENST00000439029 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
SMPD4-208ENST00000439029 R4GN34 69 aa3.67□□□□□ -1.82
SMPD4-208ENST00000439029 JMJD7-PLA2G4BH0Y9G9 81 aa3.66□□□□□ -1.82
SMPD4-208ENST00000439029 BPY2O14599 106 aa3.66□□□□□ -1.82
SMPD4-208ENST00000439029 SPATA45Q537H7 98 aa3.66□□□□□ -1.82
SMPD4-208ENST00000439029 PCP4L1A6NKN8 68 aa3.65□□□□□ -1.83
SMPD4-208ENST00000439029 M0QZ58 72 aa3.65□□□□□ -1.83
SMPD4-208ENST00000439029 NDUFC1O43677 76 aa3.65□□□□□ -1.83
SMPD4-208ENST00000439029 MT1EP04732 61 aa3.64□□□□□ -1.83
SMPD4-208ENST00000439029 PCP4P48539 62 aa3.64□□□□□ -1.83
SMPD4-208ENST00000439029 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
SMPD4-208ENST00000439029 K7EP34 96 aa3.63□□□□□ -1.83
SMPD4-208ENST00000439029 P0C880 135 aa3.61□□□□□ -1.83
SMPD4-208ENST00000439029 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
SMPD4-208ENST00000439029 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
SMPD4-208ENST00000439029 KRTAP5-4Q6L8H1 288 aa3.6□□□□□ -1.83
SMPD4-208ENST00000439029 HSD52Q0P140 79 aa3.58□□□□□ -1.84
SMPD4-208ENST00000439029 ATXN8Q156A1 80 aa3.58□□□□□ -1.84
SMPD4-208ENST00000439029 VAMP8Q9BV40 100 aa3.57□□□□□ -1.84
SMPD4-208ENST00000439029 CYP4F30PQ9H0H9 118 aa3.57□□□□□ -1.84
SMPD4-208ENST00000439029 SMIM6P0DI80 62 aa3.55□□□□□ -1.84
SMPD4-208ENST00000439029 MT1GP13640 62 aa3.53□□□□□ -1.84
SMPD4-208ENST00000439029 NAA38Q9BRA0 125 aaKnown RBP3.53□□□□□ -1.84
SMPD4-208ENST00000439029 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
SMPD4-208ENST00000439029 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
SMPD4-208ENST00000439029 A0A1B0GV90 55 aa3.51□□□□□ -1.85
SMPD4-208ENST00000439029 MT1MQ8N339 61 aa3.51□□□□□ -1.85
SMPD4-208ENST00000439029 BATFQ16520 125 aa3.5□□□□□ -1.85
SMPD4-208ENST00000439029 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
SMPD4-208ENST00000439029 C20orf197Q8N268 126 aa3.48□□□□□ -1.85
SMPD4-208ENST00000439029 TP53AIP1Q9HCN2 124 aa3.48□□□□□ -1.85
SMPD4-208ENST00000439029 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
SMPD4-208ENST00000439029 ACYP1P07311 99 aa3.45□□□□□ -1.86
SMPD4-208ENST00000439029 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
SMPD4-208ENST00000439029 MT-ATP8P03928 68 aa3.43□□□□□ -1.86
SMPD4-208ENST00000439029 TRAV22A0A0B4J277 110 aa3.42□□□□□ -1.86
SMPD4-208ENST00000439029 LOC101927531A0A1B0GV80 90 aa3.42□□□□□ -1.86
SMPD4-208ENST00000439029 A0A1W2PPM0 123 aa3.42□□□□□ -1.86
SMPD4-208ENST00000439029 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
SMPD4-208ENST00000439029 TSTD3H0UI37 97 aa3.39□□□□□ -1.87
SMPD4-208ENST00000439029 MT1LQ93083 61 aa3.39□□□□□ -1.87
SMPD4-208ENST00000439029 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
SMPD4-208ENST00000439029 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
SMPD4-208ENST00000439029 PYY3Q5JQD4 70 aa3.36□□□□□ -1.87
SMPD4-208ENST00000439029 UQCR10Q9UDW1 63 aa3.35□□□□□ -1.87
SMPD4-208ENST00000439029 SPCS1Q9Y6A9 102 aa3.35□□□□□ -1.87
SMPD4-208ENST00000439029 M0R143 59 aa3.34□□□□□ -1.87
SMPD4-208ENST00000439029 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.87
SMPD4-208ENST00000439029 UBL5Q9BZL1 73 aa3.33□□□□□ -1.88
SMPD4-208ENST00000439029 A0A0D9SG42 100 aa3.32□□□□□ -1.88
SMPD4-208ENST00000439029 SCGB1A1P11684 91 aa3.32□□□□□ -1.88
SMPD4-208ENST00000439029 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
SMPD4-208ENST00000439029 H3BT86 120 aa3.31□□□□□ -1.88
SMPD4-208ENST00000439029 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
SMPD4-208ENST00000439029 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
SMPD4-208ENST00000439029 H0Y9P7 68 aa3.29□□□□□ -1.88
SMPD4-208ENST00000439029 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
SMPD4-208ENST00000439029 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
SMPD4-208ENST00000439029 COL5A1-AS1Q5SY13 56 aa3.26□□□□□ -1.89
SMPD4-208ENST00000439029 K7ERU9 68 aa3.25□□□□□ -1.89
SMPD4-208ENST00000439029 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
SMPD4-208ENST00000439029 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
SMPD4-208ENST00000439029 ATOX1O00244 68 aa3.21□□□□□ -1.9
SMPD4-208ENST00000439029 UQCRQO14949 82 aa3.2□□□□□ -1.9
SMPD4-208ENST00000439029 LINC00208Q96KT6 92 aa3.19□□□□□ -1.9
SMPD4-208ENST00000439029 KRTAP13-4Q3LI77 160 aa3.16□□□□□ -1.9
SMPD4-208ENST00000439029 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
SMPD4-208ENST00000439029 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
SMPD4-208ENST00000439029 TAX1BP3O14907 124 aa3.14□□□□□ -1.91
SMPD4-208ENST00000439029 SMIM20Q8N5G0 67 aa3.13□□□□□ -1.91
SMPD4-208ENST00000439029 DMAC1Q96GE9 116 aa3.13□□□□□ -1.91
SMPD4-208ENST00000439029 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
SMPD4-208ENST00000439029 GTF2H5Q6ZYL4 71 aa3.09□□□□□ -1.91
SMPD4-208ENST00000439029 J3QR89 54 aa3.07□□□□□ -1.92
SMPD4-208ENST00000439029 SEC61GP60059 68 aa3.07□□□□□ -1.92
SMPD4-208ENST00000439029 HIST1H4AP62805 103 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms