RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 FAM236DA0A1B0GTK5 79 aa5.52□□□□□ -1.53
CSTF3-203ENST00000438862 FAM236CP0DP71 79 aa5.52□□□□□ -1.53
CSTF3-203ENST00000438862 KRTAP2-2Q9BYT5 123 aa5.52□□□□□ -1.53
CSTF3-203ENST00000438862 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
CSTF3-203ENST00000438862 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
CSTF3-203ENST00000438862 MT-ATP8P03928 68 aa5.48□□□□□ -1.53
CSTF3-203ENST00000438862 TP53AIP1Q9HCN2 124 aa5.48□□□□□ -1.53
CSTF3-203ENST00000438862 RBM12B-AS1Q9P1G2 102 aa5.46□□□□□ -1.54
CSTF3-203ENST00000438862 A0A087WVE0 104 aa5.45□□□□□ -1.54
CSTF3-203ENST00000438862 NDUFS5O43920 106 aa5.44□□□□□ -1.54
CSTF3-203ENST00000438862 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
CSTF3-203ENST00000438862 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
CSTF3-203ENST00000438862 UQCRQO14949 82 aa5.4□□□□□ -1.54
CSTF3-203ENST00000438862 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.54
CSTF3-203ENST00000438862 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.54
CSTF3-203ENST00000438862 SCGB1A1P11684 91 aa5.39□□□□□ -1.55
CSTF3-203ENST00000438862 SMIM20Q8N5G0 67 aa5.39□□□□□ -1.55
CSTF3-203ENST00000438862 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
CSTF3-203ENST00000438862 FAM236AA0A1B0GUQ0 79 aa5.36□□□□□ -1.55
CSTF3-203ENST00000438862 FAM236BA0A1B0GV22 79 aa5.36□□□□□ -1.55
CSTF3-203ENST00000438862 HRES1P13985 223 aa5.36□□□□□ -1.55
CSTF3-203ENST00000438862 Q5W150 140 aa5.36□□□□□ -1.55
CSTF3-203ENST00000438862 ATOX1O00244 68 aa5.35□□□□□ -1.55
CSTF3-203ENST00000438862 C5orf47Q569G3 176 aa5.35□□□□□ -1.55
CSTF3-203ENST00000438862 TRAV22A0A0B4J277 110 aa5.34□□□□□ -1.55
CSTF3-203ENST00000438862 KRTAP5-9P26371 169 aa5.34□□□□□ -1.55
CSTF3-203ENST00000438862 TRAV7A0A075B6U4 112 aa5.32□□□□□ -1.56
CSTF3-203ENST00000438862 H3BPC8 53 aa5.32□□□□□ -1.56
CSTF3-203ENST00000438862 IGKV2-30P06310 120 aa5.32□□□□□ -1.56
CSTF3-203ENST00000438862 SPINK7P58062 85 aa5.32□□□□□ -1.56
CSTF3-203ENST00000438862 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
CSTF3-203ENST00000438862 MP68P56378 58 aa5.31□□□□□ -1.56
CSTF3-203ENST00000438862 C7orf65Q6ZTY9 151 aa5.31□□□□□ -1.56
CSTF3-203ENST00000438862 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
CSTF3-203ENST00000438862 H0Y9P7 68 aa5.29□□□□□ -1.56
CSTF3-203ENST00000438862 A6NN06 94 aa5.28□□□□□ -1.56
CSTF3-203ENST00000438862 SERP2Q8N6R1 65 aa5.27□□□□□ -1.57
CSTF3-203ENST00000438862 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
CSTF3-203ENST00000438862 IGKV2D-30A0A075B6S6 120 aa5.26□□□□□ -1.57
CSTF3-203ENST00000438862 CYP4F30PQ9H0H9 118 aa5.26□□□□□ -1.57
CSTF3-203ENST00000438862 C1orf64Q8NEQ6 169 aa5.25□□□□□ -1.57
CSTF3-203ENST00000438862 KMT2DO14686 5537 aa5.25□□□□□ -1.57
CSTF3-203ENST00000438862 LINC00208Q96KT6 92 aa5.24□□□□□ -1.57
CSTF3-203ENST00000438862 COX7CP15954 63 aa5.2□□□□□ -1.58
CSTF3-203ENST00000438862 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
CSTF3-203ENST00000438862 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
CSTF3-203ENST00000438862 KLKP1Q107X0 134 aa5.17□□□□□ -1.58
CSTF3-203ENST00000438862 C20orf197Q8N268 126 aa5.15□□□□□ -1.59
CSTF3-203ENST00000438862 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
CSTF3-203ENST00000438862 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
CSTF3-203ENST00000438862 A8MUN3 132 aa5.12□□□□□ -1.59
CSTF3-203ENST00000438862 NDUFC1O43677 76 aa5.12□□□□□ -1.59
CSTF3-203ENST00000438862 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
CSTF3-203ENST00000438862 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
CSTF3-203ENST00000438862 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
CSTF3-203ENST00000438862 MT1BP07438 61 aa5.09□□□□□ -1.59
CSTF3-203ENST00000438862 SPRR2EP22531 72 aa5.09□□□□□ -1.59
CSTF3-203ENST00000438862 SPRR2BP35325 72 aa5.09□□□□□ -1.59
CSTF3-203ENST00000438862 SPRR2AP35326 72 aa5.09□□□□□ -1.59
CSTF3-203ENST00000438862 SPANXA2-OT1Q8N9U9 137 aa5.09□□□□□ -1.59
CSTF3-203ENST00000438862 Q5VV11 94 aa5.08□□□□□ -1.6
CSTF3-203ENST00000438862 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
CSTF3-203ENST00000438862 H7BZZ5 65 aa5.03□□□□□ -1.6
CSTF3-203ENST00000438862 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
CSTF3-203ENST00000438862 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
CSTF3-203ENST00000438862 ACYP2P14621 99 aa5.01□□□□□ -1.61
CSTF3-203ENST00000438862 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
CSTF3-203ENST00000438862 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
CSTF3-203ENST00000438862 S4R3F8 94 aa4.99□□□□□ -1.61
CSTF3-203ENST00000438862 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
CSTF3-203ENST00000438862 CSAG1Q6PB30 78 aa4.96□□□□□ -1.62
CSTF3-203ENST00000438862 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
CSTF3-203ENST00000438862 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
CSTF3-203ENST00000438862 LCA10Q71F78 164 aa4.95□□□□□ -1.62
CSTF3-203ENST00000438862 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
CSTF3-203ENST00000438862 SPRR2DP22532 72 aa4.93□□□□□ -1.62
CSTF3-203ENST00000438862 PCP4P48539 62 aa4.93□□□□□ -1.62
CSTF3-203ENST00000438862 TMEM258P61165 79 aa4.92□□□□□ -1.62
CSTF3-203ENST00000438862 SPTSSBQ8NFR3 76 aa4.91□□□□□ -1.62
CSTF3-203ENST00000438862 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
CSTF3-203ENST00000438862 H0YAA0 97 aa4.86□□□□□ -1.63
CSTF3-203ENST00000438862 COA5Q86WW8 74 aa4.86□□□□□ -1.63
CSTF3-203ENST00000438862 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
CSTF3-203ENST00000438862 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
CSTF3-203ENST00000438862 KRTAP4-4Q9BYR3 166 aa4.81□□□□□ -1.64
CSTF3-203ENST00000438862 MT3P25713 68 aa4.77□□□□□ -1.65
CSTF3-203ENST00000438862 SERP1Q9Y6X1 66 aa4.77□□□□□ -1.65
CSTF3-203ENST00000438862 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
CSTF3-203ENST00000438862 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
CSTF3-203ENST00000438862 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
CSTF3-203ENST00000438862 RPS28P62857 69 aaKnown RBP4.71□□□□□ -1.66
CSTF3-203ENST00000438862 SEC61GP60059 68 aa4.69□□□□□ -1.66
CSTF3-203ENST00000438862 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
CSTF3-203ENST00000438862 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
CSTF3-203ENST00000438862 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
CSTF3-203ENST00000438862 P0C880 135 aa4.65□□□□□ -1.67
CSTF3-203ENST00000438862 LINC01558Q9Y6Z2 57 aa4.64□□□□□ -1.67
CSTF3-203ENST00000438862 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
CSTF3-203ENST00000438862 A0A1B0GU69 56 aa4.63□□□□□ -1.67
CSTF3-203ENST00000438862 MT1XP80297 61 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms