RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 HYDINQ4G0P3 5121 aa5.96□□□□□ -1.46
PDLIM5-206ENST00000437932 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
PDLIM5-206ENST00000437932 M0R2T5 61 aa5.94□□□□□ -1.46
PDLIM5-206ENST00000437932 KRTAP21-3Q3LHN1 58 aa5.9□□□□□ -1.46
PDLIM5-206ENST00000437932 FAT1Q14517 4588 aa5.89□□□□□ -1.47
PDLIM5-206ENST00000437932 FAT2Q9NYQ8 4349 aa5.86□□□□□ -1.47
PDLIM5-206ENST00000437932 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
PDLIM5-206ENST00000437932 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
PDLIM5-206ENST00000437932 DYNC1H1Q14204 4646 aaKnown RBP5.84□□□□□ -1.47
PDLIM5-206ENST00000437932 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
PDLIM5-206ENST00000437932 KRTAP10-4P60372 401 aaPredicted RBP5.81□□□□□ -1.48
PDLIM5-206ENST00000437932 PKD1P98161 4303 aa5.81□□□□□ -1.48
PDLIM5-206ENST00000437932 SACSQ9NZJ4 4579 aa5.8□□□□□ -1.48
PDLIM5-206ENST00000437932 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
PDLIM5-206ENST00000437932 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
PDLIM5-206ENST00000437932 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
PDLIM5-206ENST00000437932 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
PDLIM5-206ENST00000437932 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
PDLIM5-206ENST00000437932 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
PDLIM5-206ENST00000437932 APOBP04114 4563 aaKnown RBP5.66□□□□□ -1.5
PDLIM5-206ENST00000437932 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
PDLIM5-206ENST00000437932 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
PDLIM5-206ENST00000437932 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
PDLIM5-206ENST00000437932 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
PDLIM5-206ENST00000437932 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-206ENST00000437932 MYCBP2O75592 4640 aa5.59□□□□□ -1.51
PDLIM5-206ENST00000437932 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
PDLIM5-206ENST00000437932 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
PDLIM5-206ENST00000437932 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
PDLIM5-206ENST00000437932 HSPG2P98160 4391 aa5.48□□□□□ -1.53
PDLIM5-206ENST00000437932 TNP1P09430 55 aa5.47□□□□□ -1.53
PDLIM5-206ENST00000437932 TNXBP22105 4242 aa5.47□□□□□ -1.53
PDLIM5-206ENST00000437932 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-206ENST00000437932 LPAP08519 4548 aa5.46□□□□□ -1.54
PDLIM5-206ENST00000437932 RYR2Q92736 4967 aa5.44□□□□□ -1.54
PDLIM5-206ENST00000437932 RYR1P21817 5038 aa5.4□□□□□ -1.55
PDLIM5-206ENST00000437932 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
PDLIM5-206ENST00000437932 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
PDLIM5-206ENST00000437932 KMT2CQ8NEZ4 4911 aaKnown RBP5.36□□□□□ -1.55
PDLIM5-206ENST00000437932 RYR3Q15413 4870 aa5.33□□□□□ -1.56
PDLIM5-206ENST00000437932 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
PDLIM5-206ENST00000437932 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
PDLIM5-206ENST00000437932 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
PDLIM5-206ENST00000437932 LRP2P98164 4655 aa5.25□□□□□ -1.57
PDLIM5-206ENST00000437932 KIAA1109Q2LD37 5005 aa5.23□□□□□ -1.57
PDLIM5-206ENST00000437932 EPPK1P58107 5090 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-206ENST00000437932 ABCA13Q86UQ4 5058 aa4.99□□□□□ -1.61
PDLIM5-206ENST00000437932 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
PDLIM5-206ENST00000437932 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.62
PDLIM5-206ENST00000437932 HERC2O95714 4834 aa4.9□□□□□ -1.63
PDLIM5-206ENST00000437932 MUC17Q685J3 4493 aa4.87□□□□□ -1.63
PDLIM5-206ENST00000437932 MT1HP80294 61 aa4.86□□□□□ -1.63
PDLIM5-206ENST00000437932 KRTAP10-12P60413 245 aa4.82□□□□□ -1.64
PDLIM5-206ENST00000437932 MUC2Q02817 5179 aa4.82□□□□□ -1.64
PDLIM5-206ENST00000437932 MT1FP04733 61 aa4.78□□□□□ -1.64
PDLIM5-206ENST00000437932 MT2AP02795 61 aa4.76□□□□□ -1.65
PDLIM5-206ENST00000437932 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
PDLIM5-206ENST00000437932 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
PDLIM5-206ENST00000437932 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
PDLIM5-206ENST00000437932 KRTAP19-2Q3LHN2 52 aa4.66□□□□□ -1.66
PDLIM5-206ENST00000437932 BIRC6Q9NR09 4857 aa4.65□□□□□ -1.66
PDLIM5-206ENST00000437932 KRTAP19-1Q8IUB9 90 aa4.64□□□□□ -1.67
PDLIM5-206ENST00000437932 HERC1Q15751 4861 aa4.62□□□□□ -1.67
PDLIM5-206ENST00000437932 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
PDLIM5-206ENST00000437932 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
PDLIM5-206ENST00000437932 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
PDLIM5-206ENST00000437932 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
PDLIM5-206ENST00000437932 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
PDLIM5-206ENST00000437932 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
PDLIM5-206ENST00000437932 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
PDLIM5-206ENST00000437932 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
PDLIM5-206ENST00000437932 MT1XP80297 61 aa4.48□□□□□ -1.69
PDLIM5-206ENST00000437932 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
PDLIM5-206ENST00000437932 UBR4Q5T4S7 5183 aa4.45□□□□□ -1.7
PDLIM5-206ENST00000437932 MT1BP07438 61 aa4.45□□□□□ -1.7
PDLIM5-206ENST00000437932 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
PDLIM5-206ENST00000437932 RNF213Q63HN8 5207 aa4.4□□□□□ -1.7
PDLIM5-206ENST00000437932 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
PDLIM5-206ENST00000437932 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
PDLIM5-206ENST00000437932 INE1O15225 51 aa4.37□□□□□ -1.71
PDLIM5-206ENST00000437932 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
PDLIM5-206ENST00000437932 KRTAP4-8Q9BYQ9 185 aa4.37□□□□□ -1.71
PDLIM5-206ENST00000437932 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
PDLIM5-206ENST00000437932 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
PDLIM5-206ENST00000437932 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
PDLIM5-206ENST00000437932 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
PDLIM5-206ENST00000437932 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
PDLIM5-206ENST00000437932 LCE2BO14633 110 aa4.22□□□□□ -1.73
PDLIM5-206ENST00000437932 KMT2DO14686 5537 aa4.14□□□□□ -1.75
PDLIM5-206ENST00000437932 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
PDLIM5-206ENST00000437932 MT1GP13640 62 aa4.06□□□□□ -1.76
PDLIM5-206ENST00000437932 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
PDLIM5-206ENST00000437932 USH2AO75445 5202 aa4.03□□□□□ -1.76
PDLIM5-206ENST00000437932 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
PDLIM5-206ENST00000437932 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.77
PDLIM5-206ENST00000437932 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
PDLIM5-206ENST00000437932 MT1LQ93083 61 aa3.92□□□□□ -1.78
PDLIM5-206ENST00000437932 MT1EP04732 61 aa3.89□□□□□ -1.79
PDLIM5-206ENST00000437932 LCE2AQ5TA79 106 aaPredicted RBP3.86□□□□□ -1.79
PDLIM5-206ENST00000437932 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms