RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 DNAH11Q96DT5 4516 aa3.6□□□□□ -1.83
VPS8-207ENST00000436792 MT1FP04733 61 aa3.59□□□□□ -1.83
VPS8-207ENST00000436792 PLECQ15149 4684 aaKnown RBP3.59□□□□□ -1.84
VPS8-207ENST00000436792 KRTAP4-1Q9BYQ7 146 aa3.58□□□□□ -1.84
VPS8-207ENST00000436792 NBPF19A0A087WUL8 3843 aa3.57□□□□□ -1.84
VPS8-207ENST00000436792 CELSR3Q9NYQ7 3312 aa3.56□□□□□ -1.84
VPS8-207ENST00000436792 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
VPS8-207ENST00000436792 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
VPS8-207ENST00000436792 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.84
VPS8-207ENST00000436792 SPENQ96T58 3664 aaKnown RBP3.52□□□□□ -1.85
VPS8-207ENST00000436792 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
VPS8-207ENST00000436792 DNAH10Q8IVF4 4471 aa3.5□□□□□ -1.85
VPS8-207ENST00000436792 BSNQ9UPA5 3926 aa3.5□□□□□ -1.85
VPS8-207ENST00000436792 LOC400499M0QZD8 3231 aa3.48□□□□□ -1.85
VPS8-207ENST00000436792 ASPMQ8IZT6 3477 aa3.48□□□□□ -1.85
VPS8-207ENST00000436792 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
VPS8-207ENST00000436792 DNAH5Q8TE73 4624 aa3.46□□□□□ -1.86
VPS8-207ENST00000436792 HERC1Q15751 4861 aa3.44□□□□□ -1.86
VPS8-207ENST00000436792 KRTAP19-1Q8IUB9 90 aa3.44□□□□□ -1.86
VPS8-207ENST00000436792 RELNP78509 3460 aa3.44□□□□□ -1.86
VPS8-207ENST00000436792 DNHD1Q96M86 4753 aa3.43□□□□□ -1.86
VPS8-207ENST00000436792 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
VPS8-207ENST00000436792 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
VPS8-207ENST00000436792 SMG1Q96Q15 3661 aaKnown RBP3.42□□□□□ -1.86
VPS8-207ENST00000436792 AKAP9Q99996 3911 aa3.41□□□□□ -1.86
VPS8-207ENST00000436792 LCE2DQ5TA82 110 aaPredicted RBP3.41□□□□□ -1.86
VPS8-207ENST00000436792 CSMD1Q96PZ7 3565 aa3.4□□□□□ -1.86
VPS8-207ENST00000436792 RYR1P21817 5038 aa3.4□□□□□ -1.87
VPS8-207ENST00000436792 BIRC6Q9NR09 4857 aa3.4□□□□□ -1.87
VPS8-207ENST00000436792 MT1GP13640 62 aa3.39□□□□□ -1.87
VPS8-207ENST00000436792 LRP1BQ9NZR2 4599 aa3.36□□□□□ -1.87
VPS8-207ENST00000436792 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
VPS8-207ENST00000436792 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
VPS8-207ENST00000436792 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
VPS8-207ENST00000436792 DNAH2Q9P225 4427 aa3.33□□□□□ -1.88
VPS8-207ENST00000436792 HERC2O95714 4834 aa3.33□□□□□ -1.88
VPS8-207ENST00000436792 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
VPS8-207ENST00000436792 MYCBP2O75592 4640 aa3.32□□□□□ -1.88
VPS8-207ENST00000436792 SVEP1Q4LDE5 3571 aa3.31□□□□□ -1.88
VPS8-207ENST00000436792 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
VPS8-207ENST00000436792 ANK2Q01484 3957 aa3.29□□□□□ -1.88
VPS8-207ENST00000436792 FAT1Q14517 4588 aa3.29□□□□□ -1.88
VPS8-207ENST00000436792 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.88
VPS8-207ENST00000436792 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
VPS8-207ENST00000436792 LAMA5O15230 3695 aa3.26□□□□□ -1.89
VPS8-207ENST00000436792 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
VPS8-207ENST00000436792 RYR3Q15413 4870 aa3.24□□□□□ -1.89
VPS8-207ENST00000436792 CUBNO60494 3623 aa3.24□□□□□ -1.89
VPS8-207ENST00000436792 CMYA5Q8N3K9 4069 aa3.24□□□□□ -1.89
VPS8-207ENST00000436792 EPPK1P58107 5090 aaKnown RBP3.24□□□□□ -1.89
VPS8-207ENST00000436792 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
VPS8-207ENST00000436792 FAT3Q8TDW7 4589 aa3.23□□□□□ -1.89
VPS8-207ENST00000436792 KRTAP9-8Q9BYQ0 159 aa3.23□□□□□ -1.89
VPS8-207ENST00000436792 KRTAP9-3Q9BYQ3 159 aa3.22□□□□□ -1.89
VPS8-207ENST00000436792 TRRAPQ9Y4A5 3859 aa3.22□□□□□ -1.89
VPS8-207ENST00000436792 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
VPS8-207ENST00000436792 SACSQ9NZJ4 4579 aa3.19□□□□□ -1.9
VPS8-207ENST00000436792 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
VPS8-207ENST00000436792 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
VPS8-207ENST00000436792 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
VPS8-207ENST00000436792 DNAH17Q9UFH2 4485 aa3.18□□□□□ -1.9
VPS8-207ENST00000436792 MT1BP07438 61 aa3.17□□□□□ -1.9
VPS8-207ENST00000436792 CSMD2Q7Z408 3487 aa3.17□□□□□ -1.9
VPS8-207ENST00000436792 DNAH3Q8TD57 4116 aa3.17□□□□□ -1.9
VPS8-207ENST00000436792 MT1XP80297 61 aa3.15□□□□□ -1.91
VPS8-207ENST00000436792 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
VPS8-207ENST00000436792 MT4P47944 62 aa3.14□□□□□ -1.91
VPS8-207ENST00000436792 RYR2Q92736 4967 aa3.14□□□□□ -1.91
VPS8-207ENST00000436792 APOBP04114 4563 aaKnown RBP3.13□□□□□ -1.91
VPS8-207ENST00000436792 FAT2Q9NYQ8 4349 aa3.12□□□□□ -1.91
VPS8-207ENST00000436792 DNAH8Q96JB1 4490 aa3.11□□□□□ -1.91
VPS8-207ENST00000436792 HSPG2P98160 4391 aa3.11□□□□□ -1.91
VPS8-207ENST00000436792 LYSTQ99698 3801 aa3.11□□□□□ -1.91
VPS8-207ENST00000436792 KIAA1109Q2LD37 5005 aa3.11□□□□□ -1.91
VPS8-207ENST00000436792 LRP2P98164 4655 aa3.1□□□□□ -1.91
VPS8-207ENST00000436792 MT3P25713 68 aa3.1□□□□□ -1.91
VPS8-207ENST00000436792 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
VPS8-207ENST00000436792 ZNF469Q96JG9 3925 aaPredicted RBP3.07□□□□□ -1.92
VPS8-207ENST00000436792 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
VPS8-207ENST00000436792 KRTAP2-1Q9BYU5 128 aa3.04□□□□□ -1.92
VPS8-207ENST00000436792 VPS13CQ709C8 3753 aa3.04□□□□□ -1.92
VPS8-207ENST00000436792 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
VPS8-207ENST00000436792 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
VPS8-207ENST00000436792 VPS13DQ5THJ4 4388 aa3.02□□□□□ -1.93
VPS8-207ENST00000436792 PKHD1L1Q86WI1 4243 aa3.02□□□□□ -1.93
VPS8-207ENST00000436792 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
VPS8-207ENST00000436792 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
VPS8-207ENST00000436792 MT1LQ93083 61 aa3.01□□□□□ -1.93
VPS8-207ENST00000436792 PKD1P98161 4303 aa3□□□□□ -1.93
VPS8-207ENST00000436792 HECTD4Q9Y4D8 3996 aa3□□□□□ -1.93
VPS8-207ENST00000436792 KRTAP4-8A0A0G2JLE6 195 aa3□□□□□ -1.93
VPS8-207ENST00000436792 KRTAP4-8Q9BYQ9 185 aa3□□□□□ -1.93
VPS8-207ENST00000436792 DYNC2H1Q8NCM8 4307 aaKnown RBP2.99□□□□□ -1.93
VPS8-207ENST00000436792 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
VPS8-207ENST00000436792 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
VPS8-207ENST00000436792 DNAH7Q8WXX0 4024 aa2.95□□□□□ -1.94
VPS8-207ENST00000436792 MT1EP04732 61 aa2.95□□□□□ -1.94
VPS8-207ENST00000436792 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
VPS8-207ENST00000436792 MT1MQ8N339 61 aa2.92□□□□□ -1.94
VPS8-207ENST00000436792 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms