RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
CLSTN1-203ENST00000435891 H0YAA0 97 aa5.62□□□□□ -1.51
CLSTN1-203ENST00000435891 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
CLSTN1-203ENST00000435891 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
CLSTN1-203ENST00000435891 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
CLSTN1-203ENST00000435891 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
CLSTN1-203ENST00000435891 TNXBP22105 4242 aa5.58□□□□□ -1.52
CLSTN1-203ENST00000435891 HSPG2P98160 4391 aa5.57□□□□□ -1.52
CLSTN1-203ENST00000435891 A0A0D9SG42 100 aa5.53□□□□□ -1.52
CLSTN1-203ENST00000435891 H1FX-AS1Q4G0G2 97 aa5.52□□□□□ -1.53
CLSTN1-203ENST00000435891 RYR3Q15413 4870 aa5.52□□□□□ -1.53
CLSTN1-203ENST00000435891 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
CLSTN1-203ENST00000435891 KRTAP17-1Q9BYP8 105 aa5.47□□□□□ -1.53
CLSTN1-203ENST00000435891 RYR1P21817 5038 aa5.44□□□□□ -1.54
CLSTN1-203ENST00000435891 KRTAP10-8P60410 259 aa5.44□□□□□ -1.54
CLSTN1-203ENST00000435891 KIAA1109Q2LD37 5005 aa5.44□□□□□ -1.54
CLSTN1-203ENST00000435891 Q5VSD8 79 aa5.43□□□□□ -1.54
CLSTN1-203ENST00000435891 COX6B2Q6YFQ2 88 aa5.43□□□□□ -1.54
CLSTN1-203ENST00000435891 LPAP08519 4548 aa5.4□□□□□ -1.54
CLSTN1-203ENST00000435891 RPL37P61927 97 aaKnown RBP5.39□□□□□ -1.55
CLSTN1-203ENST00000435891 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
CLSTN1-203ENST00000435891 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
CLSTN1-203ENST00000435891 XP32Q5T750 250 aa5.36□□□□□ -1.55
CLSTN1-203ENST00000435891 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
CLSTN1-203ENST00000435891 LRP2P98164 4655 aa5.34□□□□□ -1.55
CLSTN1-203ENST00000435891 EPPK1P58107 5090 aaKnown RBP5.32□□□□□ -1.56
CLSTN1-203ENST00000435891 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
CLSTN1-203ENST00000435891 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
CLSTN1-203ENST00000435891 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
CLSTN1-203ENST00000435891 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
CLSTN1-203ENST00000435891 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
CLSTN1-203ENST00000435891 ABCA13Q86UQ4 5058 aa5.25□□□□□ -1.57
CLSTN1-203ENST00000435891 S4R3F8 94 aa5.23□□□□□ -1.57
CLSTN1-203ENST00000435891 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
CLSTN1-203ENST00000435891 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
CLSTN1-203ENST00000435891 J3QL48 77 aa5.06□□□□□ -1.6
CLSTN1-203ENST00000435891 MUC17Q685J3 4493 aa5.06□□□□□ -1.6
CLSTN1-203ENST00000435891 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
CLSTN1-203ENST00000435891 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
CLSTN1-203ENST00000435891 HERC2O95714 4834 aa5.01□□□□□ -1.61
CLSTN1-203ENST00000435891 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
CLSTN1-203ENST00000435891 MUC2Q02817 5179 aa4.97□□□□□ -1.61
CLSTN1-203ENST00000435891 M0QZ58 72 aa4.93□□□□□ -1.62
CLSTN1-203ENST00000435891 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
CLSTN1-203ENST00000435891 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
CLSTN1-203ENST00000435891 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
CLSTN1-203ENST00000435891 R4GN34 69 aa4.87□□□□□ -1.63
CLSTN1-203ENST00000435891 HERC1Q15751 4861 aa4.83□□□□□ -1.64
CLSTN1-203ENST00000435891 BIRC6Q9NR09 4857 aa4.79□□□□□ -1.64
CLSTN1-203ENST00000435891 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
CLSTN1-203ENST00000435891 PCLOQ9Y6V0 5065 aa4.76□□□□□ -1.65
CLSTN1-203ENST00000435891 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
CLSTN1-203ENST00000435891 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
CLSTN1-203ENST00000435891 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
CLSTN1-203ENST00000435891 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
CLSTN1-203ENST00000435891 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
CLSTN1-203ENST00000435891 RNF213Q63HN8 5207 aa4.6□□□□□ -1.67
CLSTN1-203ENST00000435891 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
CLSTN1-203ENST00000435891 M0R2T5 61 aa4.57□□□□□ -1.68
CLSTN1-203ENST00000435891 UBR4Q5T4S7 5183 aa4.56□□□□□ -1.68
CLSTN1-203ENST00000435891 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
CLSTN1-203ENST00000435891 TNP1P09430 55 aa4.46□□□□□ -1.7
CLSTN1-203ENST00000435891 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
CLSTN1-203ENST00000435891 MT1HP80294 61 aa4.44□□□□□ -1.7
CLSTN1-203ENST00000435891 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
CLSTN1-203ENST00000435891 MT1FP04733 61 aa4.38□□□□□ -1.71
CLSTN1-203ENST00000435891 MT2AP02795 61 aa4.36□□□□□ -1.71
CLSTN1-203ENST00000435891 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
CLSTN1-203ENST00000435891 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
CLSTN1-203ENST00000435891 INE1O15225 51 aa4.29□□□□□ -1.72
CLSTN1-203ENST00000435891 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
CLSTN1-203ENST00000435891 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
CLSTN1-203ENST00000435891 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
CLSTN1-203ENST00000435891 MT1BP07438 61 aa4.23□□□□□ -1.73
CLSTN1-203ENST00000435891 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
CLSTN1-203ENST00000435891 KRTAP10-5P60370 271 aa4.19□□□□□ -1.74
CLSTN1-203ENST00000435891 MT1XP80297 61 aa4.19□□□□□ -1.74
CLSTN1-203ENST00000435891 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
CLSTN1-203ENST00000435891 USH2AO75445 5202 aa4.12□□□□□ -1.75
CLSTN1-203ENST00000435891 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
CLSTN1-203ENST00000435891 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
CLSTN1-203ENST00000435891 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
CLSTN1-203ENST00000435891 KMT2DO14686 5537 aa4.03□□□□□ -1.76
CLSTN1-203ENST00000435891 LCE2BO14633 110 aa4.02□□□□□ -1.77
CLSTN1-203ENST00000435891 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
CLSTN1-203ENST00000435891 LCE2AQ5TA79 106 aaPredicted RBP3.93□□□□□ -1.78
CLSTN1-203ENST00000435891 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
CLSTN1-203ENST00000435891 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
CLSTN1-203ENST00000435891 KRTAP4-8A0A0G2JLE6 195 aa3.88□□□□□ -1.79
CLSTN1-203ENST00000435891 KRTAP4-8Q9BYQ9 185 aa3.88□□□□□ -1.79
CLSTN1-203ENST00000435891 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
CLSTN1-203ENST00000435891 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
CLSTN1-203ENST00000435891 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
CLSTN1-203ENST00000435891 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
CLSTN1-203ENST00000435891 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
CLSTN1-203ENST00000435891 MT1EP04732 61 aa3.61□□□□□ -1.83
CLSTN1-203ENST00000435891 MT1LQ93083 61 aa3.61□□□□□ -1.83
CLSTN1-203ENST00000435891 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
CLSTN1-203ENST00000435891 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
CLSTN1-203ENST00000435891 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms