RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 C20orf166-AS1Q96NR2 134 aa3.93□□□□□ -1.78
SYNPO2-203ENST00000434046 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
SYNPO2-203ENST00000434046 A0A1B0GVY2 172 aa3.93□□□□□ -1.78
SYNPO2-203ENST00000434046 TPRXLQ17RH7 258 aa3.92□□□□□ -1.78
SYNPO2-203ENST00000434046 HYDINQ4G0P3 5121 aa3.91□□□□□ -1.78
SYNPO2-203ENST00000434046 LRP1BQ9NZR2 4599 aa3.88□□□□□ -1.79
SYNPO2-203ENST00000434046 DNAH5Q8TE73 4624 aa3.87□□□□□ -1.79
SYNPO2-203ENST00000434046 S4R3F8 94 aa3.87□□□□□ -1.79
SYNPO2-203ENST00000434046 KRTAP13-4Q3LI77 160 aa3.84□□□□□ -1.79
SYNPO2-203ENST00000434046 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.8
SYNPO2-203ENST00000434046 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
SYNPO2-203ENST00000434046 EPPK1P58107 5090 aaKnown RBP3.81□□□□□ -1.8
SYNPO2-203ENST00000434046 BIRC6Q9NR09 4857 aa3.81□□□□□ -1.8
SYNPO2-203ENST00000434046 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
SYNPO2-203ENST00000434046 KRTAP10-6P60371 365 aaPredicted RBP3.8□□□□□ -1.8
SYNPO2-203ENST00000434046 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
SYNPO2-203ENST00000434046 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
SYNPO2-203ENST00000434046 PKD1P98161 4303 aa3.78□□□□□ -1.8
SYNPO2-203ENST00000434046 XP32Q5T750 250 aa3.78□□□□□ -1.8
SYNPO2-203ENST00000434046 DYNC1H1Q14204 4646 aaKnown RBP3.76□□□□□ -1.81
SYNPO2-203ENST00000434046 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
SYNPO2-203ENST00000434046 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
SYNPO2-203ENST00000434046 KIAA1109Q2LD37 5005 aa3.73□□□□□ -1.81
SYNPO2-203ENST00000434046 M0QZ58 72 aa3.72□□□□□ -1.81
SYNPO2-203ENST00000434046 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
SYNPO2-203ENST00000434046 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
SYNPO2-203ENST00000434046 FAT1Q14517 4588 aa3.7□□□□□ -1.82
SYNPO2-203ENST00000434046 R4GN34 69 aa3.7□□□□□ -1.82
SYNPO2-203ENST00000434046 RYR1P21817 5038 aa3.7□□□□□ -1.82
SYNPO2-203ENST00000434046 HERC2O95714 4834 aa3.69□□□□□ -1.82
SYNPO2-203ENST00000434046 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
SYNPO2-203ENST00000434046 PLAC4Q8WY50 150 aa3.68□□□□□ -1.82
SYNPO2-203ENST00000434046 MYCBP2O75592 4640 aa3.67□□□□□ -1.82
SYNPO2-203ENST00000434046 KRTAP4-5Q9BYR2 181 aa3.66□□□□□ -1.82
SYNPO2-203ENST00000434046 HSPG2P98160 4391 aa3.66□□□□□ -1.82
SYNPO2-203ENST00000434046 MT1HL1P0DM35 61 aa3.64□□□□□ -1.83
SYNPO2-203ENST00000434046 KRTAP17-1Q9BYP8 105 aa3.64□□□□□ -1.83
SYNPO2-203ENST00000434046 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
SYNPO2-203ENST00000434046 M0R2T5 61 aa3.6□□□□□ -1.83
SYNPO2-203ENST00000434046 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
SYNPO2-203ENST00000434046 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
SYNPO2-203ENST00000434046 LCE2BO14633 110 aa3.57□□□□□ -1.84
SYNPO2-203ENST00000434046 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
SYNPO2-203ENST00000434046 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
SYNPO2-203ENST00000434046 FAT3Q8TDW7 4589 aa3.5□□□□□ -1.85
SYNPO2-203ENST00000434046 LPAP08519 4548 aa3.49□□□□□ -1.85
SYNPO2-203ENST00000434046 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
SYNPO2-203ENST00000434046 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
SYNPO2-203ENST00000434046 TNXBP22105 4242 aa3.44□□□□□ -1.86
SYNPO2-203ENST00000434046 LORP23490 312 aaPredicted RBP3.41□□□□□ -1.86
SYNPO2-203ENST00000434046 HERC1Q15751 4861 aa3.41□□□□□ -1.86
SYNPO2-203ENST00000434046 LRP2P98164 4655 aa3.4□□□□□ -1.86
SYNPO2-203ENST00000434046 LCE2CQ5TA81 110 aa3.4□□□□□ -1.87
SYNPO2-203ENST00000434046 TNP1P09430 55 aa3.39□□□□□ -1.87
SYNPO2-203ENST00000434046 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
SYNPO2-203ENST00000434046 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
SYNPO2-203ENST00000434046 KRTAP10-10P60014 251 aa3.31□□□□□ -1.88
SYNPO2-203ENST00000434046 UBR4Q5T4S7 5183 aa3.28□□□□□ -1.88
SYNPO2-203ENST00000434046 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
SYNPO2-203ENST00000434046 RNF213Q63HN8 5207 aa3.25□□□□□ -1.89
SYNPO2-203ENST00000434046 MUC2Q02817 5179 aa3.22□□□□□ -1.89
SYNPO2-203ENST00000434046 MUC17Q685J3 4493 aa3.14□□□□□ -1.91
SYNPO2-203ENST00000434046 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
SYNPO2-203ENST00000434046 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
SYNPO2-203ENST00000434046 FSIP2Q5CZC0 6907 aa3.09□□□□□ -1.91
SYNPO2-203ENST00000434046 INE1O15225 51 aa3.09□□□□□ -1.91
SYNPO2-203ENST00000434046 MT1HP80294 61 aa3.08□□□□□ -1.92
SYNPO2-203ENST00000434046 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
SYNPO2-203ENST00000434046 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
SYNPO2-203ENST00000434046 MT2AP02795 61 aa3.02□□□□□ -1.93
SYNPO2-203ENST00000434046 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
SYNPO2-203ENST00000434046 MT1FP04733 61 aa3□□□□□ -1.93
SYNPO2-203ENST00000434046 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.94
SYNPO2-203ENST00000434046 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
SYNPO2-203ENST00000434046 FLGP20930 4061 aaPredicted RBP2.95□□□□□ -1.94
SYNPO2-203ENST00000434046 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
SYNPO2-203ENST00000434046 KRTAP9-8Q9BYQ0 159 aa2.91□□□□□ -1.94
SYNPO2-203ENST00000434046 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.95
SYNPO2-203ENST00000434046 LOC100996750A0A140TA64 210 aa2.88□□□□□ -1.95
SYNPO2-203ENST00000434046 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
SYNPO2-203ENST00000434046 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
SYNPO2-203ENST00000434046 KRTAP9-2Q9BYQ4 174 aa2.86□□□□□ -1.95
SYNPO2-203ENST00000434046 MT1BP07438 61 aa2.83□□□□□ -1.96
SYNPO2-203ENST00000434046 KRTAP19-4Q3LI73 84 aa2.81□□□□□ -1.96
SYNPO2-203ENST00000434046 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
SYNPO2-203ENST00000434046 MT1XP80297 61 aa2.79□□□□□ -1.96
SYNPO2-203ENST00000434046 KRTAP10-5P60370 271 aa2.78□□□□□ -1.96
SYNPO2-203ENST00000434046 KRTAP10-7P60409 375 aaPredicted RBP2.77□□□□□ -1.97
SYNPO2-203ENST00000434046 KMT2DO14686 5537 aa2.75□□□□□ -1.97
SYNPO2-203ENST00000434046 USH2AO75445 5202 aa2.74□□□□□ -1.97
SYNPO2-203ENST00000434046 KRTAP9-6A0A140TA67 174 aa2.74□□□□□ -1.97
SYNPO2-203ENST00000434046 CRCT1Q9UGL9 99 aa2.73□□□□□ -1.97
SYNPO2-203ENST00000434046 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
SYNPO2-203ENST00000434046 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
SYNPO2-203ENST00000434046 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
SYNPO2-203ENST00000434046 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
SYNPO2-203ENST00000434046 KRTAP4-8A0A0G2JLE6 195 aa2.64□□□□□ -1.99
SYNPO2-203ENST00000434046 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
SYNPO2-203ENST00000434046 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
SYNPO2-203ENST00000434046 SSPOA2VEC9 5147 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms