RNA–Protein interactions for RNA: ENST00000433332.7

SRGAP3-203, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 2,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-203ENST00000433332 ACYP2P14621 99 aa4.82□□□□□ -1.64
SRGAP3-203ENST00000433332 TYMSOSQ8TAI1 123 aa4.82□□□□□ -1.64
SRGAP3-203ENST00000433332 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
SRGAP3-203ENST00000433332 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
SRGAP3-203ENST00000433332 TP53AIP1Q9HCN2 124 aa4.81□□□□□ -1.64
SRGAP3-203ENST00000433332 MMP24-AS1A0A0U1RRL7 71 aa4.8□□□□□ -1.64
SRGAP3-203ENST00000433332 SPINK1P00995 79 aa4.78□□□□□ -1.64
SRGAP3-203ENST00000433332 RPS29P62273 56 aaKnown RBP4.77□□□□□ -1.65
SRGAP3-203ENST00000433332 PKHD1L1Q86WI1 4243 aa4.77□□□□□ -1.65
SRGAP3-203ENST00000433332 Q5VSD8 79 aa4.76□□□□□ -1.65
SRGAP3-203ENST00000433332 FAT1Q14517 4588 aa4.75□□□□□ -1.65
SRGAP3-203ENST00000433332 RYR1P21817 5038 aa4.75□□□□□ -1.65
SRGAP3-203ENST00000433332 HSPG2P98160 4391 aa4.72□□□□□ -1.65
SRGAP3-203ENST00000433332 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
SRGAP3-203ENST00000433332 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
SRGAP3-203ENST00000433332 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
SRGAP3-203ENST00000433332 KRTAP10-8P60410 259 aa4.65□□□□□ -1.66
SRGAP3-203ENST00000433332 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.66
SRGAP3-203ENST00000433332 CRIPTQ9P021 101 aa4.65□□□□□ -1.67
SRGAP3-203ENST00000433332 R4GN34 69 aa4.64□□□□□ -1.67
SRGAP3-203ENST00000433332 HERC2O95714 4834 aa4.62□□□□□ -1.67
SRGAP3-203ENST00000433332 KRTAP13-3Q3SY46 172 aa4.61□□□□□ -1.67
SRGAP3-203ENST00000433332 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
SRGAP3-203ENST00000433332 TNXBP22105 4242 aa4.59□□□□□ -1.67
SRGAP3-203ENST00000433332 FLG2Q5D862 2391 aaPredicted RBP4.59□□□□□ -1.67
SRGAP3-203ENST00000433332 FAT3Q8TDW7 4589 aa4.59□□□□□ -1.67
SRGAP3-203ENST00000433332 LRP1Q07954 4544 aaKnown RBP4.59□□□□□ -1.68
SRGAP3-203ENST00000433332 TPRXLQ17RH7 258 aa4.58□□□□□ -1.68
SRGAP3-203ENST00000433332 H0YAA0 97 aa4.58□□□□□ -1.68
SRGAP3-203ENST00000433332 MT1HL1P0DM35 61 aa4.57□□□□□ -1.68
SRGAP3-203ENST00000433332 C9orf92A6NGG3 77 aa4.56□□□□□ -1.68
SRGAP3-203ENST00000433332 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
SRGAP3-203ENST00000433332 IGKV2-30P06310 120 aa4.53□□□□□ -1.68
SRGAP3-203ENST00000433332 KRTAP4-5Q9BYR2 181 aa4.51□□□□□ -1.69
SRGAP3-203ENST00000433332 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
SRGAP3-203ENST00000433332 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
SRGAP3-203ENST00000433332 DMBT1Q9UGM3 2413 aaPredicted RBP4.47□□□□□ -1.69
SRGAP3-203ENST00000433332 XP32Q5T750 250 aa4.44□□□□□ -1.7
SRGAP3-203ENST00000433332 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
SRGAP3-203ENST00000433332 PLAC4Q8WY50 150 aa4.4□□□□□ -1.7
SRGAP3-203ENST00000433332 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
SRGAP3-203ENST00000433332 COX6B2Q6YFQ2 88 aa4.38□□□□□ -1.71
SRGAP3-203ENST00000433332 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
SRGAP3-203ENST00000433332 HERC1Q15751 4861 aa4.32□□□□□ -1.72
SRGAP3-203ENST00000433332 INE1O15225 51 aa4.27□□□□□ -1.73
SRGAP3-203ENST00000433332 LRP2P98164 4655 aa4.25□□□□□ -1.73
SRGAP3-203ENST00000433332 LPAP08519 4548 aa4.24□□□□□ -1.73
SRGAP3-203ENST00000433332 S4R3F8 94 aa4.18□□□□□ -1.74
SRGAP3-203ENST00000433332 HMCN2Q8NDA2 5059 aa4.18□□□□□ -1.74
SRGAP3-203ENST00000433332 MUC17Q685J3 4493 aa4.14□□□□□ -1.75
SRGAP3-203ENST00000433332 KRTAP4-1Q9BYQ7 146 aa4.13□□□□□ -1.75
SRGAP3-203ENST00000433332 KRTAP12-2P59991 146 aa4.1□□□□□ -1.75
SRGAP3-203ENST00000433332 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.76
SRGAP3-203ENST00000433332 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
SRGAP3-203ENST00000433332 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
SRGAP3-203ENST00000433332 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
SRGAP3-203ENST00000433332 A0A0D9SG42 100 aa3.98□□□□□ -1.77
SRGAP3-203ENST00000433332 MUC2Q02817 5179 aa3.97□□□□□ -1.77
SRGAP3-203ENST00000433332 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
SRGAP3-203ENST00000433332 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
SRGAP3-203ENST00000433332 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
SRGAP3-203ENST00000433332 KRTAP13-4Q3LI77 160 aa3.94□□□□□ -1.78
SRGAP3-203ENST00000433332 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
SRGAP3-203ENST00000433332 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
SRGAP3-203ENST00000433332 M0QZ58 72 aa3.89□□□□□ -1.79
SRGAP3-203ENST00000433332 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
SRGAP3-203ENST00000433332 MT1HP80294 61 aa3.85□□□□□ -1.79
SRGAP3-203ENST00000433332 M0R2T5 61 aa3.82□□□□□ -1.8
SRGAP3-203ENST00000433332 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
SRGAP3-203ENST00000433332 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
SRGAP3-203ENST00000433332 MT2AP02795 61 aa3.72□□□□□ -1.81
SRGAP3-203ENST00000433332 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
SRGAP3-203ENST00000433332 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
SRGAP3-203ENST00000433332 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
SRGAP3-203ENST00000433332 MT1FP04733 61 aa3.69□□□□□ -1.82
SRGAP3-203ENST00000433332 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
SRGAP3-203ENST00000433332 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
SRGAP3-203ENST00000433332 KRTAP19-1Q8IUB9 90 aa3.66□□□□□ -1.82
SRGAP3-203ENST00000433332 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
SRGAP3-203ENST00000433332 KRTAP19-8Q3LI54 63 aa3.58□□□□□ -1.84
SRGAP3-203ENST00000433332 KRTAP9-3Q9BYQ3 159 aa3.57□□□□□ -1.84
SRGAP3-203ENST00000433332 MT1BP07438 61 aa3.51□□□□□ -1.85
SRGAP3-203ENST00000433332 MT3P25713 68 aa3.51□□□□□ -1.85
SRGAP3-203ENST00000433332 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
SRGAP3-203ENST00000433332 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
SRGAP3-203ENST00000433332 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
SRGAP3-203ENST00000433332 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
SRGAP3-203ENST00000433332 TNP1P09430 55 aa3.45□□□□□ -1.86
SRGAP3-203ENST00000433332 MT1XP80297 61 aa3.42□□□□□ -1.86
SRGAP3-203ENST00000433332 KRTAP10-5P60370 271 aa3.42□□□□□ -1.86
SRGAP3-203ENST00000433332 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
SRGAP3-203ENST00000433332 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
SRGAP3-203ENST00000433332 USH2AO75445 5202 aa3.35□□□□□ -1.87
SRGAP3-203ENST00000433332 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
SRGAP3-203ENST00000433332 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
SRGAP3-203ENST00000433332 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
SRGAP3-203ENST00000433332 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
SRGAP3-203ENST00000433332 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
SRGAP3-203ENST00000433332 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
SRGAP3-203ENST00000433332 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms