RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 LCA10Q71F78 164 aa6.6□□□□□ -1.35
PRKDC-203ENST00000432581 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
PRKDC-203ENST00000432581 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
PRKDC-203ENST00000432581 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
PRKDC-203ENST00000432581 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
PRKDC-203ENST00000432581 KMT2DO14686 5537 aa6.57□□□□□ -1.36
PRKDC-203ENST00000432581 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
PRKDC-203ENST00000432581 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
PRKDC-203ENST00000432581 ATP5EP2Q5VTU8 51 aa6.54□□□□□ -1.36
PRKDC-203ENST00000432581 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
PRKDC-203ENST00000432581 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
PRKDC-203ENST00000432581 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
PRKDC-203ENST00000432581 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
PRKDC-203ENST00000432581 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
PRKDC-203ENST00000432581 TP53AIP1Q9HCN2 124 aa6.46□□□□□ -1.38
PRKDC-203ENST00000432581 SCGB1A1P11684 91 aa6.42□□□□□ -1.38
PRKDC-203ENST00000432581 HIST1H4AP62805 103 aaKnown RBP6.39□□□□□ -1.39
PRKDC-203ENST00000432581 A0A087WVE0 104 aa6.37□□□□□ -1.39
PRKDC-203ENST00000432581 SPRR2FQ96RM1 72 aa6.36□□□□□ -1.39
PRKDC-203ENST00000432581 CYP4F30PQ9H0H9 118 aa6.36□□□□□ -1.39
PRKDC-203ENST00000432581 SPRR2EP22531 72 aa6.34□□□□□ -1.39
PRKDC-203ENST00000432581 SPRR2BP35325 72 aa6.34□□□□□ -1.39
PRKDC-203ENST00000432581 SPRR2AP35326 72 aa6.34□□□□□ -1.39
PRKDC-203ENST00000432581 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.39
PRKDC-203ENST00000432581 H0YAA0 97 aa6.33□□□□□ -1.4
PRKDC-203ENST00000432581 LOC101927531A0A1B0GV80 90 aa6.29□□□□□ -1.4
PRKDC-203ENST00000432581 ATOX1O00244 68 aa6.29□□□□□ -1.4
PRKDC-203ENST00000432581 NDUFC1O43677 76 aa6.29□□□□□ -1.4
PRKDC-203ENST00000432581 TRAV22A0A0B4J277 110 aa6.27□□□□□ -1.41
PRKDC-203ENST00000432581 A8MUN3 132 aa6.26□□□□□ -1.41
PRKDC-203ENST00000432581 MT1XP80297 61 aa6.25□□□□□ -1.41
PRKDC-203ENST00000432581 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
PRKDC-203ENST00000432581 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
PRKDC-203ENST00000432581 SMIM20Q8N5G0 67 aa6.23□□□□□ -1.41
PRKDC-203ENST00000432581 KRTAP2-2Q9BYT5 123 aa6.23□□□□□ -1.41
PRKDC-203ENST00000432581 KRTAP2-1Q9BYU5 128 aa6.23□□□□□ -1.41
PRKDC-203ENST00000432581 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
PRKDC-203ENST00000432581 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
PRKDC-203ENST00000432581 PLAC4Q8WY50 150 aa6.22□□□□□ -1.41
PRKDC-203ENST00000432581 PCP4P48539 62 aa6.21□□□□□ -1.42
PRKDC-203ENST00000432581 OCR1Q9BZK8 76 aa6.2□□□□□ -1.42
PRKDC-203ENST00000432581 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
PRKDC-203ENST00000432581 KRTAP12-2P59991 146 aa6.19□□□□□ -1.42
PRKDC-203ENST00000432581 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
PRKDC-203ENST00000432581 COX7CP15954 63 aa6.16□□□□□ -1.42
PRKDC-203ENST00000432581 UQCRQO14949 82 aa6.14□□□□□ -1.43
PRKDC-203ENST00000432581 SPRR2DP22532 72 aa6.14□□□□□ -1.43
PRKDC-203ENST00000432581 H0Y9P7 68 aa6.12□□□□□ -1.43
PRKDC-203ENST00000432581 R4GN34 69 aa6.11□□□□□ -1.43
PRKDC-203ENST00000432581 CCDC179H3BU77 68 aa6.1□□□□□ -1.43
PRKDC-203ENST00000432581 C20orf197Q8N268 126 aa6.08□□□□□ -1.44
PRKDC-203ENST00000432581 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
PRKDC-203ENST00000432581 MP68P56378 58 aa6.05□□□□□ -1.44
PRKDC-203ENST00000432581 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
PRKDC-203ENST00000432581 H3BPC8 53 aa6.04□□□□□ -1.44
PRKDC-203ENST00000432581 M0QZ58 72 aa6.03□□□□□ -1.44
PRKDC-203ENST00000432581 P0C880 135 aa6.02□□□□□ -1.45
PRKDC-203ENST00000432581 SNURFQ9Y675 71 aa6.01□□□□□ -1.45
PRKDC-203ENST00000432581 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
PRKDC-203ENST00000432581 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
PRKDC-203ENST00000432581 CYSTM1Q9H1C7 97 aa5.99□□□□□ -1.45
PRKDC-203ENST00000432581 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
PRKDC-203ENST00000432581 H7BZZ5 65 aa5.95□□□□□ -1.46
PRKDC-203ENST00000432581 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-203ENST00000432581 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
PRKDC-203ENST00000432581 TMEM258P61165 79 aa5.92□□□□□ -1.46
PRKDC-203ENST00000432581 ATP5EP56381 51 aaPredicted RBP5.87□□□□□ -1.47
PRKDC-203ENST00000432581 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
PRKDC-203ENST00000432581 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
PRKDC-203ENST00000432581 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
PRKDC-203ENST00000432581 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
PRKDC-203ENST00000432581 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
PRKDC-203ENST00000432581 SERP1Q9Y6X1 66 aa5.72□□□□□ -1.49
PRKDC-203ENST00000432581 SPTSSBQ8NFR3 76 aa5.69□□□□□ -1.5
PRKDC-203ENST00000432581 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
PRKDC-203ENST00000432581 RPS28P62857 69 aaKnown RBP5.68□□□□□ -1.5
PRKDC-203ENST00000432581 ACYP2P14621 99 aa5.67□□□□□ -1.5
PRKDC-203ENST00000432581 COA5Q86WW8 74 aa5.66□□□□□ -1.5
PRKDC-203ENST00000432581 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
PRKDC-203ENST00000432581 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
PRKDC-203ENST00000432581 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
PRKDC-203ENST00000432581 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
PRKDC-203ENST00000432581 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
PRKDC-203ENST00000432581 MT1EP04732 61 aa5.57□□□□□ -1.52
PRKDC-203ENST00000432581 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
PRKDC-203ENST00000432581 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
PRKDC-203ENST00000432581 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
PRKDC-203ENST00000432581 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
PRKDC-203ENST00000432581 Q1T7F1 81 aa5.46□□□□□ -1.54
PRKDC-203ENST00000432581 V9GYY9 64 aa5.46□□□□□ -1.54
PRKDC-203ENST00000432581 MT1GP13640 62 aa5.43□□□□□ -1.54
PRKDC-203ENST00000432581 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
PRKDC-203ENST00000432581 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
PRKDC-203ENST00000432581 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
PRKDC-203ENST00000432581 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
PRKDC-203ENST00000432581 A0A0D9SG42 100 aa5.38□□□□□ -1.55
PRKDC-203ENST00000432581 MT4P47944 62 aa5.38□□□□□ -1.55
PRKDC-203ENST00000432581 KRTAP19-5Q3LI72 72 aa5.37□□□□□ -1.55
PRKDC-203ENST00000432581 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
PRKDC-203ENST00000432581 A0A1B0GU69 56 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms