RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
PMS1-212ENST00000432292 KIAA1109Q2LD37 5005 aa8.75□□□□□ -1.01
PMS1-212ENST00000432292 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
PMS1-212ENST00000432292 PKHD1L1Q86WI1 4243 aa8.74□□□□□ -1.01
PMS1-212ENST00000432292 HSPG2P98160 4391 aa8.73□□□□□ -1.01
PMS1-212ENST00000432292 KRTAP3-1Q9BYR8 98 aa8.69□□□□□ -1.02
PMS1-212ENST00000432292 MYCBP2O75592 4640 aa8.67□□□□□ -1.02
PMS1-212ENST00000432292 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
PMS1-212ENST00000432292 A0A0D9SG42 100 aa8.66□□□□□ -1.02
PMS1-212ENST00000432292 RYR1P21817 5038 aa8.63□□□□□ -1.03
PMS1-212ENST00000432292 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
PMS1-212ENST00000432292 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
PMS1-212ENST00000432292 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
PMS1-212ENST00000432292 NDUFAF8A1L188 74 aa8.61□□□□□ -1.03
PMS1-212ENST00000432292 TPRXLQ17RH7 258 aa8.58□□□□□ -1.04
PMS1-212ENST00000432292 TNXBP22105 4242 aa8.58□□□□□ -1.04
PMS1-212ENST00000432292 EPPK1P58107 5090 aaKnown RBP8.57□□□□□ -1.04
PMS1-212ENST00000432292 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
PMS1-212ENST00000432292 RPL37P61927 97 aaKnown RBP8.51□□□□□ -1.05
PMS1-212ENST00000432292 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
PMS1-212ENST00000432292 MT1HL1P0DM35 61 aa8.45□□□□□ -1.06
PMS1-212ENST00000432292 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
PMS1-212ENST00000432292 XP32Q5T750 250 aa8.4□□□□□ -1.07
PMS1-212ENST00000432292 KRTAP15-1Q3LI76 137 aa8.37□□□□□ -1.07
PMS1-212ENST00000432292 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
PMS1-212ENST00000432292 LRP2P98164 4655 aa8.3□□□□□ -1.08
PMS1-212ENST00000432292 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.08
PMS1-212ENST00000432292 S4R3F8 94 aa8.26□□□□□ -1.09
PMS1-212ENST00000432292 LPAP08519 4548 aa8.25□□□□□ -1.09
PMS1-212ENST00000432292 KRTAP12-2P59991 146 aa8.25□□□□□ -1.09
PMS1-212ENST00000432292 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
PMS1-212ENST00000432292 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
PMS1-212ENST00000432292 A0A0A0MQY5 61 aa8.12□□□□□ -1.11
PMS1-212ENST00000432292 J3QL48 77 aa8.09□□□□□ -1.11
PMS1-212ENST00000432292 HERC2O95714 4834 aa8.08□□□□□ -1.12
PMS1-212ENST00000432292 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
PMS1-212ENST00000432292 LUZP6Q538Z0 58 aa7.92□□□□□ -1.14
PMS1-212ENST00000432292 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
PMS1-212ENST00000432292 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
PMS1-212ENST00000432292 MUC2Q02817 5179 aa7.85□□□□□ -1.15
PMS1-212ENST00000432292 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
PMS1-212ENST00000432292 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
PMS1-212ENST00000432292 HERC1Q15751 4861 aa7.79□□□□□ -1.16
PMS1-212ENST00000432292 M0QZ58 72 aa7.76□□□□□ -1.17
PMS1-212ENST00000432292 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
PMS1-212ENST00000432292 MUC17Q685J3 4493 aa7.72□□□□□ -1.17
PMS1-212ENST00000432292 R4GN34 69 aa7.67□□□□□ -1.18
PMS1-212ENST00000432292 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
PMS1-212ENST00000432292 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
PMS1-212ENST00000432292 HMCN2Q8NDA2 5059 aa7.51□□□□□ -1.21
PMS1-212ENST00000432292 FAT4Q6V0I7 4981 aa7.47□□□□□ -1.21
PMS1-212ENST00000432292 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
PMS1-212ENST00000432292 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
PMS1-212ENST00000432292 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
PMS1-212ENST00000432292 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
PMS1-212ENST00000432292 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
PMS1-212ENST00000432292 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
PMS1-212ENST00000432292 M0R2T5 61 aa7.24□□□□□ -1.25
PMS1-212ENST00000432292 MT1HP80294 61 aa7.09□□□□□ -1.27
PMS1-212ENST00000432292 TNP1P09430 55 aa7.06□□□□□ -1.28
PMS1-212ENST00000432292 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
PMS1-212ENST00000432292 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
PMS1-212ENST00000432292 MT1FP04733 61 aa6.94□□□□□ -1.3
PMS1-212ENST00000432292 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
PMS1-212ENST00000432292 MT2AP02795 61 aa6.92□□□□□ -1.3
PMS1-212ENST00000432292 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
PMS1-212ENST00000432292 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
PMS1-212ENST00000432292 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
PMS1-212ENST00000432292 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
PMS1-212ENST00000432292 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
PMS1-212ENST00000432292 MT1BP07438 61 aa6.61□□□□□ -1.35
PMS1-212ENST00000432292 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.36
PMS1-212ENST00000432292 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
PMS1-212ENST00000432292 INE1O15225 51 aa6.58□□□□□ -1.36
PMS1-212ENST00000432292 USH2AO75445 5202 aa6.55□□□□□ -1.36
PMS1-212ENST00000432292 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
PMS1-212ENST00000432292 MT1XP80297 61 aa6.49□□□□□ -1.37
PMS1-212ENST00000432292 LCE2BO14633 110 aa6.43□□□□□ -1.38
PMS1-212ENST00000432292 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
PMS1-212ENST00000432292 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
PMS1-212ENST00000432292 KRTAP8-1Q8IUC2 63 aa6.32□□□□□ -1.4
PMS1-212ENST00000432292 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
PMS1-212ENST00000432292 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
PMS1-212ENST00000432292 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
PMS1-212ENST00000432292 KMT2DO14686 5537 aa6.28□□□□□ -1.4
PMS1-212ENST00000432292 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
PMS1-212ENST00000432292 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
PMS1-212ENST00000432292 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
PMS1-212ENST00000432292 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
PMS1-212ENST00000432292 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.46
PMS1-212ENST00000432292 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
PMS1-212ENST00000432292 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
PMS1-212ENST00000432292 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
PMS1-212ENST00000432292 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
PMS1-212ENST00000432292 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
PMS1-212ENST00000432292 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
PMS1-212ENST00000432292 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
PMS1-212ENST00000432292 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
PMS1-212ENST00000432292 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
PMS1-212ENST00000432292 MT1EP04732 61 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms