RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SPTBN5Q9NRC6 3674 aaKnown RBP-1.24□□□□□ -2.61
CDC40-204ENST00000431461 SRCAPQ6ZRS2 3230 aa-1.25□□□□□ -2.61
CDC40-204ENST00000431461 LRBAP50851 2863 aa-1.25□□□□□ -2.61
CDC40-204ENST00000431461 MYO9AB2RTY4 2548 aa-1.25□□□□□ -2.61
CDC40-204ENST00000431461 SPTAN1Q13813 2472 aaKnown RBP-1.26□□□□□ -2.61
CDC40-204ENST00000431461 RYR2Q92736 4967 aa-1.26□□□□□ -2.61
CDC40-204ENST00000431461 SERF2P84101 59 aa-1.26□□□□□ -2.61
CDC40-204ENST00000431461 CHD7Q9P2D1 2997 aa-1.26□□□□□ -2.61
CDC40-204ENST00000431461 GNG13Q9P2W3 67 aa-1.26□□□□□ -2.61
CDC40-204ENST00000431461 TIAM1Q13009 1591 aa-1.26□□□□□ -2.61
CDC40-204ENST00000431461 A0A1B0GUL6 1792 aa-1.26□□□□□ -2.61
CDC40-204ENST00000431461 TMEM167BQ9NRX6 74 aa-1.28□□□□□ -2.61
CDC40-204ENST00000431461 DUOX2Q9NRD8 1548 aa-1.29□□□□□ -2.62
CDC40-204ENST00000431461 SPART-AS1P0CW21 52 aa-1.29□□□□□ -2.62
CDC40-204ENST00000431461 GLI2P10070 1586 aa-1.3□□□□□ -2.62
CDC40-204ENST00000431461 ASXL1Q8IXJ9 1541 aa-1.3□□□□□ -2.62
CDC40-204ENST00000431461 CSMD1Q96PZ7 3565 aa-1.3□□□□□ -2.62
CDC40-204ENST00000431461 DYNC1H1Q14204 4646 aaKnown RBP-1.31□□□□□ -2.62
CDC40-204ENST00000431461 PREX2Q70Z35 1606 aa-1.32□□□□□ -2.62
CDC40-204ENST00000431461 HILPDAQ9Y5L2 63 aa-1.32□□□□□ -2.62
CDC40-204ENST00000431461 COL6A5A8TX70 2615 aa-1.33□□□□□ -2.62
CDC40-204ENST00000431461 CEP295Q9C0D2 2601 aa-1.33□□□□□ -2.62
CDC40-204ENST00000431461 PDCD5O14737 125 aa-1.33□□□□□ -2.62
CDC40-204ENST00000431461 NMES1Q9C002 83 aa-1.33□□□□□ -2.62
CDC40-204ENST00000431461 CROCC2H7BZ55 1655 aa-1.33□□□□□ -2.62
CDC40-204ENST00000431461 ABCA9Q8IUA7 1624 aa-1.33□□□□□ -2.62
CDC40-204ENST00000431461 UGGT2Q9NYU1 1516 aa-1.34□□□□□ -2.62
CDC40-204ENST00000431461 SMIM27A0A1W2PRY6 76 aa-1.34□□□□□ -2.62
CDC40-204ENST00000431461 MT1MQ8N339 61 aa-1.34□□□□□ -2.62
CDC40-204ENST00000431461 MT2AP02795 61 aa-1.35□□□□□ -2.63
CDC40-204ENST00000431461 SMCO4Q9NRQ5 59 aa-1.35□□□□□ -2.63
CDC40-204ENST00000431461 FAM208AQ9UK61 1670 aaKnown RBP-1.35□□□□□ -2.63
CDC40-204ENST00000431461 ADGRG4Q8IZF6 3080 aa-1.36□□□□□ -2.63
CDC40-204ENST00000431461 LINC01549A6NIU2 74 aa-1.36□□□□□ -2.63
CDC40-204ENST00000431461 KAAG1Q9UBP8 84 aa-1.36□□□□□ -2.63
CDC40-204ENST00000431461 CFAP46Q8IYW2 2715 aa-1.36□□□□□ -2.63
CDC40-204ENST00000431461 TRRAPQ9Y4A5 3859 aa-1.37□□□□□ -2.63
CDC40-204ENST00000431461 DNAH17Q9UFH2 4485 aa-1.37□□□□□ -2.63
CDC40-204ENST00000431461 IQGAP3Q86VI3 1631 aa-1.37□□□□□ -2.63
CDC40-204ENST00000431461 ALS2Q96Q42 1657 aa-1.38□□□□□ -2.63
CDC40-204ENST00000431461 MGAQ8IWI9 3026 aa-1.38□□□□□ -2.63
CDC40-204ENST00000431461 LINC00308Q8TCZ7 52 aa-1.38□□□□□ -2.63
CDC40-204ENST00000431461 ABCA6Q8N139 1617 aa-1.38□□□□□ -2.63
CDC40-204ENST00000431461 M0R1W7 72 aa-1.39□□□□□ -2.63
CDC40-204ENST00000431461 S100ZQ8WXG8 99 aa-1.39□□□□□ -2.63
CDC40-204ENST00000431461 EYSQ5T1H1 3165 aa-1.39□□□□□ -2.63
CDC40-204ENST00000431461 MT1GP13640 62 aa-1.4□□□□□ -2.63
CDC40-204ENST00000431461 EEA1Q15075 1411 aa-1.42□□□□□ -2.64
CDC40-204ENST00000431461 SMG1Q96Q15 3661 aaKnown RBP-1.43□□□□□ -2.64
CDC40-204ENST00000431461 H0YGX0 51 aa-1.43□□□□□ -2.64
CDC40-204ENST00000431461 ITPR2Q14571 2701 aa-1.43□□□□□ -2.64
CDC40-204ENST00000431461 IGIPA6NJ69 53 aa-1.44□□□□□ -2.64
CDC40-204ENST00000431461 DEFB131AP59861 70 aa-1.44□□□□□ -2.64
CDC40-204ENST00000431461 WFDC10BQ8IUB3 73 aa-1.44□□□□□ -2.64
CDC40-204ENST00000431461 KIF21BO75037 1637 aa-1.44□□□□□ -2.64
CDC40-204ENST00000431461 MT1BP07438 61 aa-1.45□□□□□ -2.64
CDC40-204ENST00000431461 SCRIBQ14160 1630 aa-1.46□□□□□ -2.64
CDC40-204ENST00000431461 EFCAB5A4FU69 1503 aa-1.46□□□□□ -2.64
CDC40-204ENST00000431461 DNAH10Q8IVF4 4471 aa-1.46□□□□□ -2.64
CDC40-204ENST00000431461 UGGT1Q9NYU2 1555 aa-1.47□□□□□ -2.65
CDC40-204ENST00000431461 DEFB136Q30KP8 78 aa-1.48□□□□□ -2.65
CDC40-204ENST00000431461 LEAP2Q969E1 77 aa-1.48□□□□□ -2.65
CDC40-204ENST00000431461 CSMD2Q7Z408 3487 aa-1.49□□□□□ -2.65
CDC40-204ENST00000431461 DNAH5Q8TE73 4624 aa-1.49□□□□□ -2.65
CDC40-204ENST00000431461 DEFB4AO15263 64 aa-1.49□□□□□ -2.65
CDC40-204ENST00000431461 EFCAB6Q5THR3 1501 aa-1.5□□□□□ -2.65
CDC40-204ENST00000431461 A0A087WWC5 75 aa-1.51□□□□□ -2.65
CDC40-204ENST00000431461 TLN1Q9Y490 2541 aaKnown RBP-1.52□□□□□ -2.65
CDC40-204ENST00000431461 ABCA10Q8WWZ4 1543 aa-1.53□□□□□ -2.65
CDC40-204ENST00000431461 CCDC180Q9P1Z9 1646 aa-1.54□□□□□ -2.66
CDC40-204ENST00000431461 POLR2KP53803 58 aaKnown RBP-1.54□□□□□ -2.66
CDC40-204ENST00000431461 DMXL2Q8TDJ6 3036 aa-1.55□□□□□ -2.66
CDC40-204ENST00000431461 MROH2AA6NES4 1674 aa-1.56□□□□□ -2.66
CDC40-204ENST00000431461 LMO7Q8WWI1 1683 aa-1.57□□□□□ -2.66
CDC40-204ENST00000431461 PLNP26678 52 aa-1.57□□□□□ -2.66
CDC40-204ENST00000431461 SYCP2Q9BX26 1530 aa-1.58□□□□□ -2.66
CDC40-204ENST00000431461 AGLP35573 1532 aa-1.59□□□□□ -2.66
CDC40-204ENST00000431461 RPS29P62273 56 aaKnown RBP-1.59□□□□□ -2.66
CDC40-204ENST00000431461 SMIM5Q71RC9 77 aa-1.59□□□□□ -2.66
CDC40-204ENST00000431461 CPS1P31327 1500 aa-1.6□□□□□ -2.67
CDC40-204ENST00000431461 ABCA5Q8WWZ7 1642 aa-1.62□□□□□ -2.67
CDC40-204ENST00000431461 ABCA13Q86UQ4 5058 aa-1.62□□□□□ -2.67
CDC40-204ENST00000431461 ZFHX4Q86UP3 3567 aa-1.62□□□□□ -2.67
CDC40-204ENST00000431461 ATMQ13315 3056 aa-1.62□□□□□ -2.67
CDC40-204ENST00000431461 SMIM2Q9BVW6 85 aa-1.65□□□□□ -2.67
CDC40-204ENST00000431461 FREM2Q5SZK8 3169 aa-1.65□□□□□ -2.67
CDC40-204ENST00000431461 TRPM2O94759 1503 aa-1.66□□□□□ -2.68
CDC40-204ENST00000431461 KRTAP20-1Q3LI63 56 aa-1.68□□□□□ -2.68
CDC40-204ENST00000431461 PRUNE2Q8WUY3 3088 aa-1.68□□□□□ -2.68
CDC40-204ENST00000431461 ADCY10Q96PN6 1610 aa-1.69□□□□□ -2.68
CDC40-204ENST00000431461 CFAP54Q96N23 3096 aa-1.7□□□□□ -2.68
CDC40-204ENST00000431461 CRYBG3Q68DQ2 2970 aa-1.71□□□□□ -2.68
CDC40-204ENST00000431461 TFF3Q07654 80 aa-1.71□□□□□ -2.68
CDC40-204ENST00000431461 PRXQ9BXM0 1461 aa-1.71□□□□□ -2.68
CDC40-204ENST00000431461 CLTCL1P53675 1640 aa-1.73□□□□□ -2.69
CDC40-204ENST00000431461 MYO15AQ9UKN7 3530 aa-1.73□□□□□ -2.69
CDC40-204ENST00000431461 MT1FP04733 61 aa-1.73□□□□□ -2.69
CDC40-204ENST00000431461 CMC2Q9NRP2 79 aa-1.74□□□□□ -2.69
CDC40-204ENST00000431461 VPS13CQ709C8 3753 aa-1.75□□□□□ -2.69
CDC40-204ENST00000431461 DDX60Q8IY21 1712 aaKnown RBP-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms