RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 FLG2Q5D862 2391 aaPredicted RBP8.03□□□□□ -1.12
LINC00839-202ENST00000429940 LRP1Q07954 4544 aaKnown RBP8.03□□□□□ -1.12
LINC00839-202ENST00000429940 H1FX-AS1Q4G0G2 97 aa8.01□□□□□ -1.13
LINC00839-202ENST00000429940 MYCBP2O75592 4640 aa8□□□□□ -1.13
LINC00839-202ENST00000429940 PKHD1L1Q86WI1 4243 aa7.98□□□□□ -1.13
LINC00839-202ENST00000429940 KRTAP4-5Q9BYR2 181 aa7.96□□□□□ -1.14
LINC00839-202ENST00000429940 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
LINC00839-202ENST00000429940 BIRC6Q9NR09 4857 aa7.9□□□□□ -1.14
LINC00839-202ENST00000429940 KRTAP25-1Q3LHN0 102 aa7.87□□□□□ -1.15
LINC00839-202ENST00000429940 TNXBP22105 4242 aa7.86□□□□□ -1.15
LINC00839-202ENST00000429940 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
LINC00839-202ENST00000429940 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
LINC00839-202ENST00000429940 K7ERS5 55 aa7.84□□□□□ -1.15
LINC00839-202ENST00000429940 DMBT1Q9UGM3 2413 aaPredicted RBP7.83□□□□□ -1.16
LINC00839-202ENST00000429940 HERC2O95714 4834 aa7.79□□□□□ -1.16
LINC00839-202ENST00000429940 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
LINC00839-202ENST00000429940 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
LINC00839-202ENST00000429940 KRTAP10-6P60371 365 aaPredicted RBP7.72□□□□□ -1.17
LINC00839-202ENST00000429940 CRIPTQ9P021 101 aa7.72□□□□□ -1.17
LINC00839-202ENST00000429940 PCLOQ9Y6V0 5065 aa7.72□□□□□ -1.17
LINC00839-202ENST00000429940 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
LINC00839-202ENST00000429940 ROMO1P60602 79 aa7.68□□□□□ -1.18
LINC00839-202ENST00000429940 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
LINC00839-202ENST00000429940 S4R3F8 94 aa7.66□□□□□ -1.18
LINC00839-202ENST00000429940 A0A0D9SG42 100 aa7.65□□□□□ -1.18
LINC00839-202ENST00000429940 XP32Q5T750 250 aa7.63□□□□□ -1.19
LINC00839-202ENST00000429940 H3BS24 57 aa7.61□□□□□ -1.19
LINC00839-202ENST00000429940 P0C880 135 aa7.56□□□□□ -1.2
LINC00839-202ENST00000429940 J3QL48 77 aa7.54□□□□□ -1.2
LINC00839-202ENST00000429940 HERC1Q15751 4861 aa7.51□□□□□ -1.21
LINC00839-202ENST00000429940 LPAP08519 4548 aa7.51□□□□□ -1.21
LINC00839-202ENST00000429940 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
LINC00839-202ENST00000429940 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
LINC00839-202ENST00000429940 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
LINC00839-202ENST00000429940 LRP2P98164 4655 aa7.39□□□□□ -1.23
LINC00839-202ENST00000429940 SPINT4Q6UDR6 99 aa7.39□□□□□ -1.23
LINC00839-202ENST00000429940 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
LINC00839-202ENST00000429940 M0QZ58 72 aa7.31□□□□□ -1.24
LINC00839-202ENST00000429940 HMCN2Q8NDA2 5059 aa7.25□□□□□ -1.25
LINC00839-202ENST00000429940 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
LINC00839-202ENST00000429940 MUC2Q02817 5179 aa7.2□□□□□ -1.26
LINC00839-202ENST00000429940 R4GN34 69 aa7.12□□□□□ -1.27
LINC00839-202ENST00000429940 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
LINC00839-202ENST00000429940 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
LINC00839-202ENST00000429940 LCE2BO14633 110 aa7.09□□□□□ -1.27
LINC00839-202ENST00000429940 RNF213Q63HN8 5207 aa7.06□□□□□ -1.28
LINC00839-202ENST00000429940 KRTAP4-1Q9BYQ7 146 aa7.04□□□□□ -1.28
LINC00839-202ENST00000429940 SEC61BP60468 96 aaKnown RBP7.01□□□□□ -1.29
LINC00839-202ENST00000429940 MUC17Q685J3 4493 aa7□□□□□ -1.29
LINC00839-202ENST00000429940 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
LINC00839-202ENST00000429940 PLAC4Q8WY50 150 aa6.84□□□□□ -1.31
LINC00839-202ENST00000429940 FAT4Q6V0I7 4981 aa6.83□□□□□ -1.32
LINC00839-202ENST00000429940 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
LINC00839-202ENST00000429940 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
LINC00839-202ENST00000429940 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
LINC00839-202ENST00000429940 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
LINC00839-202ENST00000429940 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
LINC00839-202ENST00000429940 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
LINC00839-202ENST00000429940 LUZP6Q538Z0 58 aa6.56□□□□□ -1.36
LINC00839-202ENST00000429940 TNP1P09430 55 aa6.54□□□□□ -1.36
LINC00839-202ENST00000429940 MT1HP80294 61 aa6.52□□□□□ -1.37
LINC00839-202ENST00000429940 M0R2T5 61 aa6.47□□□□□ -1.37
LINC00839-202ENST00000429940 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.37
LINC00839-202ENST00000429940 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
LINC00839-202ENST00000429940 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
LINC00839-202ENST00000429940 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
LINC00839-202ENST00000429940 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
LINC00839-202ENST00000429940 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
LINC00839-202ENST00000429940 MT2AP02795 61 aa6.24□□□□□ -1.41
LINC00839-202ENST00000429940 MT1FP04733 61 aa6.23□□□□□ -1.41
LINC00839-202ENST00000429940 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
LINC00839-202ENST00000429940 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
LINC00839-202ENST00000429940 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
LINC00839-202ENST00000429940 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
LINC00839-202ENST00000429940 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
LINC00839-202ENST00000429940 USH2AO75445 5202 aa6□□□□□ -1.45
LINC00839-202ENST00000429940 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
LINC00839-202ENST00000429940 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
LINC00839-202ENST00000429940 MT1BP07438 61 aa5.94□□□□□ -1.46
LINC00839-202ENST00000429940 MT1XP80297 61 aa5.94□□□□□ -1.46
LINC00839-202ENST00000429940 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
LINC00839-202ENST00000429940 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
LINC00839-202ENST00000429940 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
LINC00839-202ENST00000429940 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
LINC00839-202ENST00000429940 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
LINC00839-202ENST00000429940 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
LINC00839-202ENST00000429940 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
LINC00839-202ENST00000429940 INE1O15225 51 aa5.69□□□□□ -1.5
LINC00839-202ENST00000429940 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
LINC00839-202ENST00000429940 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
LINC00839-202ENST00000429940 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
LINC00839-202ENST00000429940 KMT2DO14686 5537 aa5.52□□□□□ -1.53
LINC00839-202ENST00000429940 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
LINC00839-202ENST00000429940 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
LINC00839-202ENST00000429940 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.55
LINC00839-202ENST00000429940 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.55
LINC00839-202ENST00000429940 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
LINC00839-202ENST00000429940 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
LINC00839-202ENST00000429940 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
LINC00839-202ENST00000429940 KRTAP19-7Q3SYF9 63 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms