RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
ATXN3-204ENST00000429774 FRAS1Q86XX4 4008 aa3.57□□□□□ -1.84
ATXN3-204ENST00000429774 DNAH6Q9C0G6 4158 aa3.56□□□□□ -1.84
ATXN3-204ENST00000429774 DNAH7Q8WXX0 4024 aa3.55□□□□□ -1.84
ATXN3-204ENST00000429774 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
ATXN3-204ENST00000429774 VPS13DQ5THJ4 4388 aa3.54□□□□□ -1.84
ATXN3-204ENST00000429774 STARD9Q9P2P6 4700 aa3.53□□□□□ -1.84
ATXN3-204ENST00000429774 DYNC2H1Q8NCM8 4307 aaKnown RBP3.5□□□□□ -1.85
ATXN3-204ENST00000429774 DNAH2Q9P225 4427 aa3.5□□□□□ -1.85
ATXN3-204ENST00000429774 KRTAP10-4P60372 401 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-204ENST00000429774 FAT2Q9NYQ8 4349 aa3.49□□□□□ -1.85
ATXN3-204ENST00000429774 RYR2Q92736 4967 aa3.49□□□□□ -1.85
ATXN3-204ENST00000429774 DNAH17Q9UFH2 4485 aa3.49□□□□□ -1.85
ATXN3-204ENST00000429774 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
ATXN3-204ENST00000429774 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
ATXN3-204ENST00000429774 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
ATXN3-204ENST00000429774 HECTD4Q9Y4D8 3996 aa3.45□□□□□ -1.86
ATXN3-204ENST00000429774 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
ATXN3-204ENST00000429774 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
ATXN3-204ENST00000429774 RYR1P21817 5038 aa3.44□□□□□ -1.86
ATXN3-204ENST00000429774 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
ATXN3-204ENST00000429774 HERC2O95714 4834 aa3.42□□□□□ -1.86
ATXN3-204ENST00000429774 KRTAP3-1Q9BYR8 98 aa3.4□□□□□ -1.86
ATXN3-204ENST00000429774 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
ATXN3-204ENST00000429774 LRP1BQ9NZR2 4599 aa3.37□□□□□ -1.87
ATXN3-204ENST00000429774 DNAH8Q96JB1 4490 aa3.35□□□□□ -1.87
ATXN3-204ENST00000429774 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
ATXN3-204ENST00000429774 ABCA13Q86UQ4 5058 aa3.32□□□□□ -1.88
ATXN3-204ENST00000429774 KRTAP13-4Q3LI77 160 aa3.32□□□□□ -1.88
ATXN3-204ENST00000429774 SACSQ9NZJ4 4579 aa3.31□□□□□ -1.88
ATXN3-204ENST00000429774 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
ATXN3-204ENST00000429774 INE1O15225 51 aa3.29□□□□□ -1.88
ATXN3-204ENST00000429774 DYNC1H1Q14204 4646 aaKnown RBP3.27□□□□□ -1.89
ATXN3-204ENST00000429774 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
ATXN3-204ENST00000429774 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
ATXN3-204ENST00000429774 HSPG2P98160 4391 aa3.23□□□□□ -1.89
ATXN3-204ENST00000429774 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
ATXN3-204ENST00000429774 KRTAP3-3Q9BYR6 98 aa3.22□□□□□ -1.89
ATXN3-204ENST00000429774 HERC1Q15751 4861 aa3.21□□□□□ -1.89
ATXN3-204ENST00000429774 PKD1P98161 4303 aa3.21□□□□□ -1.89
ATXN3-204ENST00000429774 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-204ENST00000429774 FAT1Q14517 4588 aa3.21□□□□□ -1.9
ATXN3-204ENST00000429774 KRTAP4-1Q9BYQ7 146 aa3.2□□□□□ -1.9
ATXN3-204ENST00000429774 KRTAP17-1Q9BYP8 105 aa3.2□□□□□ -1.9
ATXN3-204ENST00000429774 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
ATXN3-204ENST00000429774 PKHD1L1Q86WI1 4243 aa3.18□□□□□ -1.9
ATXN3-204ENST00000429774 MT1HP80294 61 aa3.14□□□□□ -1.91
ATXN3-204ENST00000429774 KRTAP3-2Q9BYR7 98 aa3.13□□□□□ -1.91
ATXN3-204ENST00000429774 LORP23490 312 aaPredicted RBP3.13□□□□□ -1.91
ATXN3-204ENST00000429774 TNXBP22105 4242 aa3.12□□□□□ -1.91
ATXN3-204ENST00000429774 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
ATXN3-204ENST00000429774 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
ATXN3-204ENST00000429774 LPAP08519 4548 aa3.07□□□□□ -1.92
ATXN3-204ENST00000429774 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
ATXN3-204ENST00000429774 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
ATXN3-204ENST00000429774 LRP1Q07954 4544 aaKnown RBP3.03□□□□□ -1.92
ATXN3-204ENST00000429774 FAT3Q8TDW7 4589 aa3.03□□□□□ -1.92
ATXN3-204ENST00000429774 MT2AP02795 61 aa2.99□□□□□ -1.93
ATXN3-204ENST00000429774 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
ATXN3-204ENST00000429774 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
ATXN3-204ENST00000429774 MT1FP04733 61 aa2.96□□□□□ -1.94
ATXN3-204ENST00000429774 MYCBP2O75592 4640 aa2.93□□□□□ -1.94
ATXN3-204ENST00000429774 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
ATXN3-204ENST00000429774 KRTAP23-1A1A580 65 aa2.91□□□□□ -1.94
ATXN3-204ENST00000429774 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
ATXN3-204ENST00000429774 MUC2Q02817 5179 aa2.89□□□□□ -1.95
ATXN3-204ENST00000429774 MUC17Q685J3 4493 aa2.89□□□□□ -1.95
ATXN3-204ENST00000429774 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
ATXN3-204ENST00000429774 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
ATXN3-204ENST00000429774 LCE2CQ5TA81 110 aa2.76□□□□□ -1.97
ATXN3-204ENST00000429774 KRTAP9-8Q9BYQ0 159 aa2.76□□□□□ -1.97
ATXN3-204ENST00000429774 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
ATXN3-204ENST00000429774 LRP2P98164 4655 aa2.76□□□□□ -1.97
ATXN3-204ENST00000429774 KRTAP10-5P60370 271 aa2.74□□□□□ -1.97
ATXN3-204ENST00000429774 SPRR2EP22531 72 aa2.73□□□□□ -1.97
ATXN3-204ENST00000429774 SPRR2BP35325 72 aa2.73□□□□□ -1.97
ATXN3-204ENST00000429774 SPRR2AP35326 72 aa2.73□□□□□ -1.97
ATXN3-204ENST00000429774 KRTAP10-7P60409 375 aaPredicted RBP2.73□□□□□ -1.97
ATXN3-204ENST00000429774 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
ATXN3-204ENST00000429774 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
ATXN3-204ENST00000429774 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
ATXN3-204ENST00000429774 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
ATXN3-204ENST00000429774 MT1BP07438 61 aa2.66□□□□□ -1.98
ATXN3-204ENST00000429774 MT1XP80297 61 aa2.66□□□□□ -1.98
ATXN3-204ENST00000429774 KRTAP9-6A0A140TA67 174 aa2.64□□□□□ -1.99
ATXN3-204ENST00000429774 KRTAP9-2Q9BYQ4 174 aa2.64□□□□□ -1.99
ATXN3-204ENST00000429774 SPRR2DP22532 72 aa2.63□□□□□ -1.99
ATXN3-204ENST00000429774 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
ATXN3-204ENST00000429774 KRTAP4-8A0A0G2JLE6 195 aa2.62□□□□□ -1.99
ATXN3-204ENST00000429774 KRTAP4-8Q9BYQ9 185 aa2.62□□□□□ -1.99
ATXN3-204ENST00000429774 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
ATXN3-204ENST00000429774 LCE2BO14633 110 aa2.6□□□□□ -1.99
ATXN3-204ENST00000429774 LCE2DQ5TA82 110 aaPredicted RBP2.6□□□□□ -1.99
ATXN3-204ENST00000429774 KRTAP19-4Q3LI73 84 aa2.56□□□□□ -2
ATXN3-204ENST00000429774 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
ATXN3-204ENST00000429774 MT1GP13640 62 aa2.52□□□□□ -2.01
ATXN3-204ENST00000429774 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
ATXN3-204ENST00000429774 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
ATXN3-204ENST00000429774 LCE2AQ5TA79 106 aaPredicted RBP2.5□□□□□ -2.01
ATXN3-204ENST00000429774 LCE3BQ5TA77 95 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 417.8 ms