RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
SYNPO2-202ENST00000429713 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
SYNPO2-202ENST00000429713 KRTAP12-1P59990 96 aa3.78□□□□□ -1.81
SYNPO2-202ENST00000429713 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
SYNPO2-202ENST00000429713 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.82
SYNPO2-202ENST00000429713 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
SYNPO2-202ENST00000429713 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
SYNPO2-202ENST00000429713 KRTAP3-1Q9BYR8 98 aa3.63□□□□□ -1.83
SYNPO2-202ENST00000429713 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
SYNPO2-202ENST00000429713 A0A1B0GVY2 172 aa3.62□□□□□ -1.83
SYNPO2-202ENST00000429713 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
SYNPO2-202ENST00000429713 DNAH11Q96DT5 4516 aa3.59□□□□□ -1.83
SYNPO2-202ENST00000429713 STARD9Q9P2P6 4700 aa3.58□□□□□ -1.84
SYNPO2-202ENST00000429713 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
SYNPO2-202ENST00000429713 KRTAP3-2Q9BYR7 98 aa3.56□□□□□ -1.84
SYNPO2-202ENST00000429713 PLECQ15149 4684 aaKnown RBP3.55□□□□□ -1.84
SYNPO2-202ENST00000429713 KRTAP19-4Q3LI73 84 aa3.53□□□□□ -1.84
SYNPO2-202ENST00000429713 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
SYNPO2-202ENST00000429713 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
SYNPO2-202ENST00000429713 KRTAP3-3Q9BYR6 98 aa3.45□□□□□ -1.86
SYNPO2-202ENST00000429713 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
SYNPO2-202ENST00000429713 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.87
SYNPO2-202ENST00000429713 FLGP20930 4061 aaPredicted RBP3.4□□□□□ -1.87
SYNPO2-202ENST00000429713 PKD1P98161 4303 aa3.39□□□□□ -1.87
SYNPO2-202ENST00000429713 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
SYNPO2-202ENST00000429713 SACSQ9NZJ4 4579 aa3.33□□□□□ -1.88
SYNPO2-202ENST00000429713 HSPG2P98160 4391 aa3.32□□□□□ -1.88
SYNPO2-202ENST00000429713 DNAH5Q8TE73 4624 aa3.32□□□□□ -1.88
SYNPO2-202ENST00000429713 TNXBP22105 4242 aa3.31□□□□□ -1.88
SYNPO2-202ENST00000429713 LRP1BQ9NZR2 4599 aa3.29□□□□□ -1.88
SYNPO2-202ENST00000429713 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
SYNPO2-202ENST00000429713 KRTAP4-5Q9BYR2 181 aa3.25□□□□□ -1.89
SYNPO2-202ENST00000429713 MT1HL1P0DM35 61 aa3.24□□□□□ -1.89
SYNPO2-202ENST00000429713 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
SYNPO2-202ENST00000429713 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
SYNPO2-202ENST00000429713 APOBP04114 4563 aaKnown RBP3.14□□□□□ -1.91
SYNPO2-202ENST00000429713 LORP23490 312 aaPredicted RBP3.13□□□□□ -1.91
SYNPO2-202ENST00000429713 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
SYNPO2-202ENST00000429713 LRP1Q07954 4544 aaKnown RBP3.13□□□□□ -1.91
SYNPO2-202ENST00000429713 FAT3Q8TDW7 4589 aa3.1□□□□□ -1.91
SYNPO2-202ENST00000429713 MYCBP2O75592 4640 aa3.09□□□□□ -1.91
SYNPO2-202ENST00000429713 DYNC1H1Q14204 4646 aaKnown RBP3.09□□□□□ -1.91
SYNPO2-202ENST00000429713 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
SYNPO2-202ENST00000429713 FAT1Q14517 4588 aa3.07□□□□□ -1.92
SYNPO2-202ENST00000429713 DNHD1Q96M86 4753 aa3.05□□□□□ -1.92
SYNPO2-202ENST00000429713 LPAP08519 4548 aa3.05□□□□□ -1.92
SYNPO2-202ENST00000429713 MT3P25713 68 aa3.02□□□□□ -1.93
SYNPO2-202ENST00000429713 HYDINQ4G0P3 5121 aa3.01□□□□□ -1.93
SYNPO2-202ENST00000429713 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
SYNPO2-202ENST00000429713 KRTAP4-1Q9BYQ7 146 aa2.94□□□□□ -1.94
SYNPO2-202ENST00000429713 LRP2P98164 4655 aa2.89□□□□□ -1.95
SYNPO2-202ENST00000429713 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
SYNPO2-202ENST00000429713 MUC17Q685J3 4493 aa2.88□□□□□ -1.95
SYNPO2-202ENST00000429713 CRCT1Q9UGL9 99 aa2.86□□□□□ -1.95
SYNPO2-202ENST00000429713 KRTAP17-1Q9BYP8 105 aa2.85□□□□□ -1.95
SYNPO2-202ENST00000429713 MT1HP80294 61 aa2.84□□□□□ -1.96
SYNPO2-202ENST00000429713 KMT2CQ8NEZ4 4911 aaKnown RBP2.81□□□□□ -1.96
SYNPO2-202ENST00000429713 MT2AP02795 61 aa2.76□□□□□ -1.97
SYNPO2-202ENST00000429713 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
SYNPO2-202ENST00000429713 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
SYNPO2-202ENST00000429713 MT1FP04733 61 aa2.73□□□□□ -1.97
SYNPO2-202ENST00000429713 RYR3Q15413 4870 aa2.73□□□□□ -1.97
SYNPO2-202ENST00000429713 KRTAP19-8Q3LI54 63 aa2.73□□□□□ -1.97
SYNPO2-202ENST00000429713 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
SYNPO2-202ENST00000429713 KRTAP10-7P60409 375 aaPredicted RBP2.68□□□□□ -1.98
SYNPO2-202ENST00000429713 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
SYNPO2-202ENST00000429713 MT1XP80297 61 aa2.64□□□□□ -1.99
SYNPO2-202ENST00000429713 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
SYNPO2-202ENST00000429713 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
SYNPO2-202ENST00000429713 KRTAP2-1Q9BYU5 128 aa2.62□□□□□ -1.99
SYNPO2-202ENST00000429713 RYR1P21817 5038 aa2.59□□□□□ -1.99
SYNPO2-202ENST00000429713 RYR2Q92736 4967 aa2.59□□□□□ -1.99
SYNPO2-202ENST00000429713 KRTAP9-8Q9BYQ0 159 aa2.58□□□□□ -2
SYNPO2-202ENST00000429713 MT1BP07438 61 aa2.54□□□□□ -2
SYNPO2-202ENST00000429713 LCE2CQ5TA81 110 aa2.52□□□□□ -2.01
SYNPO2-202ENST00000429713 MT1LQ93083 61 aa2.52□□□□□ -2.01
SYNPO2-202ENST00000429713 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
SYNPO2-202ENST00000429713 KRTAP19-2Q3LHN2 52 aa2.52□□□□□ -2.01
SYNPO2-202ENST00000429713 SPRR2FQ96RM1 72 aa2.49□□□□□ -2.01
SYNPO2-202ENST00000429713 KRTAP9-2Q9BYQ4 174 aa2.49□□□□□ -2.01
SYNPO2-202ENST00000429713 LCE3BQ5TA77 95 aa2.47□□□□□ -2.01
SYNPO2-202ENST00000429713 KRTAP4-8A0A0G2JLE6 195 aa2.47□□□□□ -2.01
SYNPO2-202ENST00000429713 KRTAP4-8Q9BYQ9 185 aa2.47□□□□□ -2.01
SYNPO2-202ENST00000429713 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.01
SYNPO2-202ENST00000429713 KRTAP9-3Q9BYQ3 159 aa2.46□□□□□ -2.02
SYNPO2-202ENST00000429713 HERC2O95714 4834 aa2.46□□□□□ -2.02
SYNPO2-202ENST00000429713 MT1EP04732 61 aa2.45□□□□□ -2.02
SYNPO2-202ENST00000429713 SPRR2EP22531 72 aa2.44□□□□□ -2.02
SYNPO2-202ENST00000429713 SPRR2BP35325 72 aa2.44□□□□□ -2.02
SYNPO2-202ENST00000429713 SPRR2AP35326 72 aa2.44□□□□□ -2.02
SYNPO2-202ENST00000429713 MT1GP13640 62 aa2.44□□□□□ -2.02
SYNPO2-202ENST00000429713 HERC1Q15751 4861 aa2.44□□□□□ -2.02
SYNPO2-202ENST00000429713 MT1AP04731 61 aa2.43□□□□□ -2.02
SYNPO2-202ENST00000429713 LCE2DQ5TA82 110 aaPredicted RBP2.42□□□□□ -2.02
SYNPO2-202ENST00000429713 EPPK1P58107 5090 aaKnown RBP2.41□□□□□ -2.02
SYNPO2-202ENST00000429713 MUC2Q02817 5179 aa2.4□□□□□ -2.02
SYNPO2-202ENST00000429713 LCE2AQ5TA79 106 aaPredicted RBP2.38□□□□□ -2.03
SYNPO2-202ENST00000429713 BIRC6Q9NR09 4857 aa2.37□□□□□ -2.03
SYNPO2-202ENST00000429713 LCE2BO14633 110 aa2.37□□□□□ -2.03
SYNPO2-202ENST00000429713 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms