RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 APOBP04114 4563 aaKnown RBP7.91□□□□□ -1.14
CACTIN-203ENST00000429344 COX6B2Q6YFQ2 88 aa7.9□□□□□ -1.14
CACTIN-203ENST00000429344 C20orf166-AS1Q96NR2 134 aa7.88□□□□□ -1.15
CACTIN-203ENST00000429344 A0A0A0MQY5 61 aa7.87□□□□□ -1.15
CACTIN-203ENST00000429344 KIAA1109Q2LD37 5005 aa7.85□□□□□ -1.15
CACTIN-203ENST00000429344 P0C880 135 aa7.83□□□□□ -1.16
CACTIN-203ENST00000429344 KRTAP10-8P60410 259 aa7.83□□□□□ -1.16
CACTIN-203ENST00000429344 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
CACTIN-203ENST00000429344 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
CACTIN-203ENST00000429344 J3QL48 77 aa7.81□□□□□ -1.16
CACTIN-203ENST00000429344 MYCBP2O75592 4640 aa7.8□□□□□ -1.16
CACTIN-203ENST00000429344 RYR3Q15413 4870 aa7.79□□□□□ -1.16
CACTIN-203ENST00000429344 RPL37P61927 97 aaKnown RBP7.74□□□□□ -1.17
CACTIN-203ENST00000429344 XP32Q5T750 250 aa7.72□□□□□ -1.17
CACTIN-203ENST00000429344 KRTAP13-4Q3LI77 160 aa7.69□□□□□ -1.18
CACTIN-203ENST00000429344 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
CACTIN-203ENST00000429344 S4R3F8 94 aa7.67□□□□□ -1.18
CACTIN-203ENST00000429344 RYR1P21817 5038 aa7.66□□□□□ -1.18
CACTIN-203ENST00000429344 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
CACTIN-203ENST00000429344 HSPG2P98160 4391 aa7.63□□□□□ -1.19
CACTIN-203ENST00000429344 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
CACTIN-203ENST00000429344 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
CACTIN-203ENST00000429344 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
CACTIN-203ENST00000429344 FAT3Q8TDW7 4589 aa7.58□□□□□ -1.2
CACTIN-203ENST00000429344 KRTAP3-3Q9BYR6 98 aa7.57□□□□□ -1.2
CACTIN-203ENST00000429344 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
CACTIN-203ENST00000429344 EPPK1P58107 5090 aaKnown RBP7.55□□□□□ -1.2
CACTIN-203ENST00000429344 PKHD1L1Q86WI1 4243 aa7.51□□□□□ -1.21
CACTIN-203ENST00000429344 KRTAP3-2Q9BYR7 98 aa7.5□□□□□ -1.21
CACTIN-203ENST00000429344 KRTAP12-2P59991 146 aa7.49□□□□□ -1.21
CACTIN-203ENST00000429344 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
CACTIN-203ENST00000429344 TNXBP22105 4242 aa7.38□□□□□ -1.23
CACTIN-203ENST00000429344 LRP2P98164 4655 aa7.34□□□□□ -1.23
CACTIN-203ENST00000429344 LPAP08519 4548 aa7.34□□□□□ -1.23
CACTIN-203ENST00000429344 M0QZ58 72 aa7.33□□□□□ -1.24
CACTIN-203ENST00000429344 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
CACTIN-203ENST00000429344 HERC2O95714 4834 aa7.28□□□□□ -1.24
CACTIN-203ENST00000429344 R4GN34 69 aa7.28□□□□□ -1.24
CACTIN-203ENST00000429344 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
CACTIN-203ENST00000429344 ABCA13Q86UQ4 5058 aa7.23□□□□□ -1.25
CACTIN-203ENST00000429344 M0R2T5 61 aa7.14□□□□□ -1.27
CACTIN-203ENST00000429344 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
CACTIN-203ENST00000429344 BIRC6Q9NR09 4857 aa7.06□□□□□ -1.28
CACTIN-203ENST00000429344 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
CACTIN-203ENST00000429344 KRTAP4-1Q9BYQ7 146 aa7.04□□□□□ -1.28
CACTIN-203ENST00000429344 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
CACTIN-203ENST00000429344 HERC1Q15751 4861 aa6.93□□□□□ -1.3
CACTIN-203ENST00000429344 MUC2Q02817 5179 aa6.9□□□□□ -1.3
CACTIN-203ENST00000429344 PCLOQ9Y6V0 5065 aa6.82□□□□□ -1.32
CACTIN-203ENST00000429344 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
CACTIN-203ENST00000429344 MUC17Q685J3 4493 aa6.66□□□□□ -1.34
CACTIN-203ENST00000429344 HMCN2Q8NDA2 5059 aa6.65□□□□□ -1.35
CACTIN-203ENST00000429344 FAT4Q6V0I7 4981 aa6.63□□□□□ -1.35
CACTIN-203ENST00000429344 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
CACTIN-203ENST00000429344 TNP1P09430 55 aa6.59□□□□□ -1.35
CACTIN-203ENST00000429344 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
CACTIN-203ENST00000429344 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
CACTIN-203ENST00000429344 UBR4Q5T4S7 5183 aa6.58□□□□□ -1.36
CACTIN-203ENST00000429344 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.38
CACTIN-203ENST00000429344 MT1HP80294 61 aa6.44□□□□□ -1.38
CACTIN-203ENST00000429344 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
CACTIN-203ENST00000429344 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
CACTIN-203ENST00000429344 MT2AP02795 61 aa6.3□□□□□ -1.4
CACTIN-203ENST00000429344 MT1FP04733 61 aa6.29□□□□□ -1.4
CACTIN-203ENST00000429344 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
CACTIN-203ENST00000429344 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
CACTIN-203ENST00000429344 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
CACTIN-203ENST00000429344 SPRR2GQ9BYE4 73 aa6.21□□□□□ -1.42
CACTIN-203ENST00000429344 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
CACTIN-203ENST00000429344 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
CACTIN-203ENST00000429344 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
CACTIN-203ENST00000429344 INE1O15225 51 aa5.95□□□□□ -1.46
CACTIN-203ENST00000429344 MT1BP07438 61 aa5.93□□□□□ -1.46
CACTIN-203ENST00000429344 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
CACTIN-203ENST00000429344 KRTAP9-3Q9BYQ3 159 aa5.91□□□□□ -1.46
CACTIN-203ENST00000429344 USH2AO75445 5202 aa5.88□□□□□ -1.47
CACTIN-203ENST00000429344 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
CACTIN-203ENST00000429344 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
CACTIN-203ENST00000429344 MT1XP80297 61 aa5.84□□□□□ -1.47
CACTIN-203ENST00000429344 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
CACTIN-203ENST00000429344 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
CACTIN-203ENST00000429344 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
CACTIN-203ENST00000429344 LCE2BO14633 110 aa5.78□□□□□ -1.48
CACTIN-203ENST00000429344 KMT2DO14686 5537 aa5.77□□□□□ -1.49
CACTIN-203ENST00000429344 LCE2AQ5TA79 106 aaPredicted RBP5.74□□□□□ -1.49
CACTIN-203ENST00000429344 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
CACTIN-203ENST00000429344 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
CACTIN-203ENST00000429344 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
CACTIN-203ENST00000429344 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
CACTIN-203ENST00000429344 DSTQ03001 7570 aaKnown RBP5.52□□□□□ -1.53
CACTIN-203ENST00000429344 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
CACTIN-203ENST00000429344 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
CACTIN-203ENST00000429344 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
CACTIN-203ENST00000429344 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
CACTIN-203ENST00000429344 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
CACTIN-203ENST00000429344 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
CACTIN-203ENST00000429344 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
CACTIN-203ENST00000429344 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
CACTIN-203ENST00000429344 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
CACTIN-203ENST00000429344 MUC12Q9UKN1 5478 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms