RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 M0QZ58 72 aa5.44□□□□□ -1.54
ATP2C1-204ENST00000428331 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
ATP2C1-204ENST00000428331 A0A1B0GVY2 172 aa5.43□□□□□ -1.54
ATP2C1-204ENST00000428331 KRTAP10-4P60372 401 aaPredicted RBP5.43□□□□□ -1.54
ATP2C1-204ENST00000428331 Q5VSD8 79 aa5.43□□□□□ -1.54
ATP2C1-204ENST00000428331 KRTAP10-8P60410 259 aa5.4□□□□□ -1.55
ATP2C1-204ENST00000428331 KRTAP12-2P59991 146 aa5.39□□□□□ -1.55
ATP2C1-204ENST00000428331 R4GN34 69 aa5.36□□□□□ -1.55
ATP2C1-204ENST00000428331 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
ATP2C1-204ENST00000428331 J3QL48 77 aa5.34□□□□□ -1.55
ATP2C1-204ENST00000428331 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.55
ATP2C1-204ENST00000428331 FAT1Q14517 4588 aa5.31□□□□□ -1.56
ATP2C1-204ENST00000428331 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
ATP2C1-204ENST00000428331 PKD1P98161 4303 aa5.29□□□□□ -1.56
ATP2C1-204ENST00000428331 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
ATP2C1-204ENST00000428331 KRTAP21-3Q3LHN1 58 aa5.27□□□□□ -1.57
ATP2C1-204ENST00000428331 FAT2Q9NYQ8 4349 aa5.27□□□□□ -1.57
ATP2C1-204ENST00000428331 DNHD1Q96M86 4753 aa5.25□□□□□ -1.57
ATP2C1-204ENST00000428331 HYDINQ4G0P3 5121 aa5.24□□□□□ -1.57
ATP2C1-204ENST00000428331 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
ATP2C1-204ENST00000428331 PKHD1P08F94 4074 aa5.19□□□□□ -1.58
ATP2C1-204ENST00000428331 PLAC4Q8WY50 150 aa5.17□□□□□ -1.58
ATP2C1-204ENST00000428331 APOBP04114 4563 aaKnown RBP5.12□□□□□ -1.59
ATP2C1-204ENST00000428331 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
ATP2C1-204ENST00000428331 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
ATP2C1-204ENST00000428331 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
ATP2C1-204ENST00000428331 FAT3Q8TDW7 4589 aa5.09□□□□□ -1.6
ATP2C1-204ENST00000428331 MYCBP2O75592 4640 aa5.07□□□□□ -1.6
ATP2C1-204ENST00000428331 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
ATP2C1-204ENST00000428331 HSPG2P98160 4391 aa4.98□□□□□ -1.61
ATP2C1-204ENST00000428331 TNP1P09430 55 aa4.94□□□□□ -1.62
ATP2C1-204ENST00000428331 LORP23490 312 aaPredicted RBP4.92□□□□□ -1.62
ATP2C1-204ENST00000428331 TNXBP22105 4242 aa4.9□□□□□ -1.62
ATP2C1-204ENST00000428331 RYR2Q92736 4967 aa4.87□□□□□ -1.63
ATP2C1-204ENST00000428331 LRP2P98164 4655 aa4.86□□□□□ -1.63
ATP2C1-204ENST00000428331 KRTAP17-1Q9BYP8 105 aa4.84□□□□□ -1.63
ATP2C1-204ENST00000428331 RYR1P21817 5038 aa4.83□□□□□ -1.64
ATP2C1-204ENST00000428331 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
ATP2C1-204ENST00000428331 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
ATP2C1-204ENST00000428331 RYR3Q15413 4870 aa4.75□□□□□ -1.65
ATP2C1-204ENST00000428331 KRTAP4-1Q9BYQ7 146 aa4.75□□□□□ -1.65
ATP2C1-204ENST00000428331 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
ATP2C1-204ENST00000428331 KRTAP4-5Q9BYR2 181 aa4.73□□□□□ -1.65
ATP2C1-204ENST00000428331 M0R2T5 61 aa4.71□□□□□ -1.66
ATP2C1-204ENST00000428331 LPAP08519 4548 aa4.69□□□□□ -1.66
ATP2C1-204ENST00000428331 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
ATP2C1-204ENST00000428331 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
ATP2C1-204ENST00000428331 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
ATP2C1-204ENST00000428331 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
ATP2C1-204ENST00000428331 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
ATP2C1-204ENST00000428331 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
ATP2C1-204ENST00000428331 LCE3AQ5TA76 89 aa4.46□□□□□ -1.69
ATP2C1-204ENST00000428331 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
ATP2C1-204ENST00000428331 INE1O15225 51 aa4.4□□□□□ -1.71
ATP2C1-204ENST00000428331 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
ATP2C1-204ENST00000428331 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
ATP2C1-204ENST00000428331 KRTAP19-1Q8IUB9 90 aa4.38□□□□□ -1.71
ATP2C1-204ENST00000428331 HERC2O95714 4834 aa4.37□□□□□ -1.71
ATP2C1-204ENST00000428331 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
ATP2C1-204ENST00000428331 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
ATP2C1-204ENST00000428331 HERC1Q15751 4861 aa4.3□□□□□ -1.72
ATP2C1-204ENST00000428331 KRTAP10-12P60413 245 aa4.3□□□□□ -1.72
ATP2C1-204ENST00000428331 LCE2CQ5TA81 110 aa4.28□□□□□ -1.72
ATP2C1-204ENST00000428331 MT2AP02795 61 aa4.27□□□□□ -1.73
ATP2C1-204ENST00000428331 MT1HP80294 61 aa4.27□□□□□ -1.73
ATP2C1-204ENST00000428331 MT1FP04733 61 aa4.26□□□□□ -1.73
ATP2C1-204ENST00000428331 MUC2Q02817 5179 aa4.24□□□□□ -1.73
ATP2C1-204ENST00000428331 BIRC6Q9NR09 4857 aa4.24□□□□□ -1.73
ATP2C1-204ENST00000428331 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.73
ATP2C1-204ENST00000428331 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
ATP2C1-204ENST00000428331 MT1XP80297 61 aa4.14□□□□□ -1.75
ATP2C1-204ENST00000428331 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
ATP2C1-204ENST00000428331 MT1BP07438 61 aa4.13□□□□□ -1.75
ATP2C1-204ENST00000428331 FAT4Q6V0I7 4981 aa4.09□□□□□ -1.76
ATP2C1-204ENST00000428331 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
ATP2C1-204ENST00000428331 PCLOQ9Y6V0 5065 aa4.07□□□□□ -1.76
ATP2C1-204ENST00000428331 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
ATP2C1-204ENST00000428331 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
ATP2C1-204ENST00000428331 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
ATP2C1-204ENST00000428331 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
ATP2C1-204ENST00000428331 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
ATP2C1-204ENST00000428331 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
ATP2C1-204ENST00000428331 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
ATP2C1-204ENST00000428331 KRTAP4-8A0A0G2JLE6 195 aa3.79□□□□□ -1.8
ATP2C1-204ENST00000428331 KRTAP4-8Q9BYQ9 185 aa3.79□□□□□ -1.8
ATP2C1-204ENST00000428331 LCE2BO14633 110 aa3.77□□□□□ -1.81
ATP2C1-204ENST00000428331 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
ATP2C1-204ENST00000428331 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
ATP2C1-204ENST00000428331 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
ATP2C1-204ENST00000428331 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
ATP2C1-204ENST00000428331 KRTAP4-7Q9BYR0 210 aa3.68□□□□□ -1.82
ATP2C1-204ENST00000428331 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
ATP2C1-204ENST00000428331 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
ATP2C1-204ENST00000428331 MT1LQ93083 61 aa3.63□□□□□ -1.83
ATP2C1-204ENST00000428331 MT1EP04732 61 aa3.6□□□□□ -1.83
ATP2C1-204ENST00000428331 KMT2DO14686 5537 aa3.56□□□□□ -1.84
ATP2C1-204ENST00000428331 LCE2AQ5TA79 106 aaPredicted RBP3.52□□□□□ -1.85
ATP2C1-204ENST00000428331 USH2AO75445 5202 aa3.52□□□□□ -1.85
ATP2C1-204ENST00000428331 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
ATP2C1-204ENST00000428331 MT1GP13640 62 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms