RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 KRTAP3-2Q9BYR7 98 aa3.42□□□□□ -1.86
LINC00649-203ENST00000427447 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
LINC00649-203ENST00000427447 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
LINC00649-203ENST00000427447 FRAS1Q86XX4 4008 aa3.4□□□□□ -1.86
LINC00649-203ENST00000427447 ZNF469Q96JG9 3925 aaPredicted RBP3.39□□□□□ -1.87
LINC00649-203ENST00000427447 KMT2AQ03164 3969 aa3.39□□□□□ -1.87
LINC00649-203ENST00000427447 KRTAP3-1Q9BYR8 98 aa3.37□□□□□ -1.87
LINC00649-203ENST00000427447 PRKDCP78527 4128 aaKnown RBP3.36□□□□□ -1.87
LINC00649-203ENST00000427447 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
LINC00649-203ENST00000427447 VPS13BQ7Z7G8 4022 aa3.29□□□□□ -1.88
LINC00649-203ENST00000427447 FLGP20930 4061 aaPredicted RBP3.25□□□□□ -1.89
LINC00649-203ENST00000427447 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
LINC00649-203ENST00000427447 DNAH2Q9P225 4427 aa3.21□□□□□ -1.9
LINC00649-203ENST00000427447 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
LINC00649-203ENST00000427447 CRCT1Q9UGL9 99 aa3.16□□□□□ -1.9
LINC00649-203ENST00000427447 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
LINC00649-203ENST00000427447 PKHD1P08F94 4074 aa3.13□□□□□ -1.91
LINC00649-203ENST00000427447 DNAH1Q9P2D7 4330 aa3.06□□□□□ -1.92
LINC00649-203ENST00000427447 HUWE1Q7Z6Z7 4374 aaKnown RBP2.99□□□□□ -1.93
LINC00649-203ENST00000427447 MT1HL1P0DM35 61 aa2.99□□□□□ -1.93
LINC00649-203ENST00000427447 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
LINC00649-203ENST00000427447 DYNC2H1Q8NCM8 4307 aaKnown RBP2.98□□□□□ -1.93
LINC00649-203ENST00000427447 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
LINC00649-203ENST00000427447 ANK3Q12955 4377 aaKnown RBP2.94□□□□□ -1.94
LINC00649-203ENST00000427447 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
LINC00649-203ENST00000427447 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
LINC00649-203ENST00000427447 LORP23490 312 aaPredicted RBP2.91□□□□□ -1.94
LINC00649-203ENST00000427447 PKHD1L1Q86WI1 4243 aa2.9□□□□□ -1.94
LINC00649-203ENST00000427447 VPS13DQ5THJ4 4388 aa2.88□□□□□ -1.95
LINC00649-203ENST00000427447 DNAH10Q8IVF4 4471 aa2.85□□□□□ -1.95
LINC00649-203ENST00000427447 KRTAP4-5Q9BYR2 181 aa2.82□□□□□ -1.96
LINC00649-203ENST00000427447 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
LINC00649-203ENST00000427447 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
LINC00649-203ENST00000427447 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
LINC00649-203ENST00000427447 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
LINC00649-203ENST00000427447 FAT2Q9NYQ8 4349 aa2.76□□□□□ -1.97
LINC00649-203ENST00000427447 PKD1P98161 4303 aa2.71□□□□□ -1.97
LINC00649-203ENST00000427447 DNAH11Q96DT5 4516 aa2.71□□□□□ -1.97
LINC00649-203ENST00000427447 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
LINC00649-203ENST00000427447 DNAH8Q96JB1 4490 aa2.69□□□□□ -1.98
LINC00649-203ENST00000427447 DNAH9Q9NYC9 4486 aa2.67□□□□□ -1.98
LINC00649-203ENST00000427447 MT1HP80294 61 aa2.66□□□□□ -1.98
LINC00649-203ENST00000427447 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
LINC00649-203ENST00000427447 LCE3BQ5TA77 95 aa2.62□□□□□ -1.99
LINC00649-203ENST00000427447 HSPG2P98160 4391 aa2.61□□□□□ -1.99
LINC00649-203ENST00000427447 TNXBP22105 4242 aa2.61□□□□□ -1.99
LINC00649-203ENST00000427447 MT2AP02795 61 aa2.6□□□□□ -1.99
LINC00649-203ENST00000427447 PRM1P04553 51 aa2.6□□□□□ -1.99
LINC00649-203ENST00000427447 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
LINC00649-203ENST00000427447 PLECQ15149 4684 aaKnown RBP2.57□□□□□ -2
LINC00649-203ENST00000427447 KRTAP4-1Q9BYQ7 146 aa2.56□□□□□ -2
LINC00649-203ENST00000427447 DNAH5Q8TE73 4624 aa2.55□□□□□ -2
LINC00649-203ENST00000427447 LCE2CQ5TA81 110 aa2.53□□□□□ -2
LINC00649-203ENST00000427447 SPRR2EP22531 72 aa2.53□□□□□ -2
LINC00649-203ENST00000427447 SPRR2BP35325 72 aa2.53□□□□□ -2
LINC00649-203ENST00000427447 SPRR2AP35326 72 aa2.53□□□□□ -2
LINC00649-203ENST00000427447 MT1FP04733 61 aa2.53□□□□□ -2
LINC00649-203ENST00000427447 LCE2BO14633 110 aa2.49□□□□□ -2.01
LINC00649-203ENST00000427447 SPRR2DP22532 72 aa2.46□□□□□ -2.02
LINC00649-203ENST00000427447 KRTAP19-8Q3LI54 63 aa2.45□□□□□ -2.02
LINC00649-203ENST00000427447 KRTAP9-6A0A140TA67 174 aa2.43□□□□□ -2.02
LINC00649-203ENST00000427447 LRP1BQ9NZR2 4599 aa2.42□□□□□ -2.02
LINC00649-203ENST00000427447 MT1LQ93083 61 aa2.41□□□□□ -2.02
LINC00649-203ENST00000427447 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
LINC00649-203ENST00000427447 MT1GP13640 62 aa2.4□□□□□ -2.02
LINC00649-203ENST00000427447 MT1XP80297 61 aa2.39□□□□□ -2.03
LINC00649-203ENST00000427447 KRTAP19-1Q8IUB9 90 aa2.37□□□□□ -2.03
LINC00649-203ENST00000427447 HYDINQ4G0P3 5121 aa2.36□□□□□ -2.03
LINC00649-203ENST00000427447 DNHD1Q96M86 4753 aa2.36□□□□□ -2.03
LINC00649-203ENST00000427447 RYR2Q92736 4967 aa2.35□□□□□ -2.03
LINC00649-203ENST00000427447 LRP1Q07954 4544 aaKnown RBP2.33□□□□□ -2.04
LINC00649-203ENST00000427447 LCE2DQ5TA82 110 aaPredicted RBP2.32□□□□□ -2.04
LINC00649-203ENST00000427447 FAT1Q14517 4588 aa2.32□□□□□ -2.04
LINC00649-203ENST00000427447 RYR1P21817 5038 aa2.31□□□□□ -2.04
LINC00649-203ENST00000427447 FAT3Q8TDW7 4589 aa2.31□□□□□ -2.04
LINC00649-203ENST00000427447 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
LINC00649-203ENST00000427447 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
LINC00649-203ENST00000427447 SACSQ9NZJ4 4579 aa2.3□□□□□ -2.04
LINC00649-203ENST00000427447 BIRC6Q9NR09 4857 aa2.3□□□□□ -2.04
LINC00649-203ENST00000427447 KRTAP17-1Q9BYP8 105 aa2.3□□□□□ -2.04
LINC00649-203ENST00000427447 MT1EP04732 61 aa2.3□□□□□ -2.04
LINC00649-203ENST00000427447 KRTAP20-1Q3LI63 56 aa2.27□□□□□ -2.05
LINC00649-203ENST00000427447 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
LINC00649-203ENST00000427447 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
LINC00649-203ENST00000427447 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
LINC00649-203ENST00000427447 KRTAP9-2Q9BYQ4 174 aa2.26□□□□□ -2.05
LINC00649-203ENST00000427447 MT1AP04731 61 aa2.26□□□□□ -2.05
LINC00649-203ENST00000427447 KRTAP19-3Q7Z4W3 81 aa2.26□□□□□ -2.05
LINC00649-203ENST00000427447 KRTAP9-8Q9BYQ0 159 aa2.25□□□□□ -2.05
LINC00649-203ENST00000427447 KRTAP4-8A0A0G2JLE6 195 aa2.24□□□□□ -2.05
LINC00649-203ENST00000427447 KRTAP4-8Q9BYQ9 185 aa2.24□□□□□ -2.05
LINC00649-203ENST00000427447 MT1BP07438 61 aa2.24□□□□□ -2.05
LINC00649-203ENST00000427447 PCLOQ9Y6V0 5065 aa2.24□□□□□ -2.05
LINC00649-203ENST00000427447 RYR3Q15413 4870 aa2.23□□□□□ -2.05
LINC00649-203ENST00000427447 SYNE1Q8NF91 8797 aaKnown RBP2.22□□□□□ -2.05
LINC00649-203ENST00000427447 LCE2AQ5TA79 106 aaPredicted RBP2.22□□□□□ -2.05
LINC00649-203ENST00000427447 HERC1Q15751 4861 aa2.21□□□□□ -2.06
LINC00649-203ENST00000427447 KRTAP9-3Q9BYQ3 159 aa2.19□□□□□ -2.06
LINC00649-203ENST00000427447 LPAP08519 4548 aa2.19□□□□□ -2.06
LINC00649-203ENST00000427447 MT4P47944 62 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms