RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ALMS1Q8TCU4 4167 aa2.86□□□□□ -1.95
LINC00458-202ENST00000427299 DNAH2Q9P225 4427 aa2.86□□□□□ -1.95
LINC00458-202ENST00000427299 STAB2Q8WWQ8 2551 aa2.85□□□□□ -1.95
LINC00458-202ENST00000427299 TENM2Q9NT68 2774 aa2.85□□□□□ -1.95
LINC00458-202ENST00000427299 ACYP2P14621 99 aa2.84□□□□□ -1.95
LINC00458-202ENST00000427299 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
LINC00458-202ENST00000427299 SSBP3-AS1Q7Z2R9 100 aa2.84□□□□□ -1.95
LINC00458-202ENST00000427299 DNAH11Q96DT5 4516 aa2.84□□□□□ -1.96
LINC00458-202ENST00000427299 FBN1P35555 2871 aaKnown RBP2.83□□□□□ -1.96
LINC00458-202ENST00000427299 CSMD3Q7Z407 3707 aa2.83□□□□□ -1.96
LINC00458-202ENST00000427299 IGLV7-43P04211 117 aa2.83□□□□□ -1.96
LINC00458-202ENST00000427299 Q5W150 140 aa2.83□□□□□ -1.96
LINC00458-202ENST00000427299 COL7A1Q02388 2944 aa2.82□□□□□ -1.96
LINC00458-202ENST00000427299 C1orf134Q5TEV5 83 aa2.82□□□□□ -1.96
LINC00458-202ENST00000427299 DMAC1Q96GE9 116 aa2.82□□□□□ -1.96
LINC00458-202ENST00000427299 DNAH5Q8TE73 4624 aa2.81□□□□□ -1.96
LINC00458-202ENST00000427299 COL6A5A8TX70 2615 aa2.81□□□□□ -1.96
LINC00458-202ENST00000427299 HRES1P13985 223 aa2.81□□□□□ -1.96
LINC00458-202ENST00000427299 SPAG11AQ6PDA7 123 aa2.81□□□□□ -1.96
LINC00458-202ENST00000427299 SPINK6Q6UWN8 80 aa2.81□□□□□ -1.96
LINC00458-202ENST00000427299 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
LINC00458-202ENST00000427299 SPTSSBQ8NFR3 76 aa2.81□□□□□ -1.96
LINC00458-202ENST00000427299 MGAM2Q2M2H8 2515 aa2.79□□□□□ -1.96
LINC00458-202ENST00000427299 LINC00313P59037 77 aa2.79□□□□□ -1.96
LINC00458-202ENST00000427299 A6NN06 94 aa2.78□□□□□ -1.96
LINC00458-202ENST00000427299 KMT2AQ03164 3969 aa2.78□□□□□ -1.96
LINC00458-202ENST00000427299 A0A1B0GU69 56 aa2.77□□□□□ -1.97
LINC00458-202ENST00000427299 LCA10Q71F78 164 aa2.77□□□□□ -1.97
LINC00458-202ENST00000427299 RPS29P62273 56 aaKnown RBP2.76□□□□□ -1.97
LINC00458-202ENST00000427299 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
LINC00458-202ENST00000427299 Q6ZSA8 131 aa2.75□□□□□ -1.97
LINC00458-202ENST00000427299 SRRM2Q9UQ35 2752 aaKnown RBP2.75□□□□□ -1.97
LINC00458-202ENST00000427299 UQCR11O14957 56 aa2.74□□□□□ -1.97
LINC00458-202ENST00000427299 LY6G6CO95867 125 aa2.74□□□□□ -1.97
LINC00458-202ENST00000427299 SPINK1P00995 79 aa2.74□□□□□ -1.97
LINC00458-202ENST00000427299 SPINK7P58062 85 aa2.73□□□□□ -1.97
LINC00458-202ENST00000427299 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.97
LINC00458-202ENST00000427299 VPS13BQ7Z7G8 4022 aa2.71□□□□□ -1.98
LINC00458-202ENST00000427299 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
LINC00458-202ENST00000427299 KRTAP13-2Q52LG2 175 aa2.71□□□□□ -1.98
LINC00458-202ENST00000427299 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
LINC00458-202ENST00000427299 SPATA8Q6RVD6 105 aa2.7□□□□□ -1.98
LINC00458-202ENST00000427299 PKD1P98161 4303 aa2.69□□□□□ -1.98
LINC00458-202ENST00000427299 MEGF8Q7Z7M0 2845 aa2.69□□□□□ -1.98
LINC00458-202ENST00000427299 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
LINC00458-202ENST00000427299 K7ERS5 55 aa2.69□□□□□ -1.98
LINC00458-202ENST00000427299 ADM2Q7Z4H4 148 aa2.69□□□□□ -1.98
LINC00458-202ENST00000427299 LINC00304Q8N9R0 145 aa2.69□□□□□ -1.98
LINC00458-202ENST00000427299 KRTAP21-3Q3LHN1 58 aa2.67□□□□□ -1.98
LINC00458-202ENST00000427299 RETNLBQ9BQ08 111 aa2.67□□□□□ -1.98
LINC00458-202ENST00000427299 APOBP04114 4563 aaKnown RBP2.66□□□□□ -1.98
LINC00458-202ENST00000427299 TGP01266 2768 aa2.65□□□□□ -1.99
LINC00458-202ENST00000427299 A8MUU9 505 aa2.65□□□□□ -1.99
LINC00458-202ENST00000427299 RYR3Q15413 4870 aa2.65□□□□□ -1.99
LINC00458-202ENST00000427299 HYDINQ4G0P3 5121 aa2.64□□□□□ -1.99
LINC00458-202ENST00000427299 C20orf166-AS1Q96NR2 134 aa2.64□□□□□ -1.99
LINC00458-202ENST00000427299 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
LINC00458-202ENST00000427299 PKHD1P08F94 4074 aa2.64□□□□□ -1.99
LINC00458-202ENST00000427299 LINC01554Q52M75 96 aa2.62□□□□□ -1.99
LINC00458-202ENST00000427299 DYNC1H1Q14204 4646 aaKnown RBP2.61□□□□□ -1.99
LINC00458-202ENST00000427299 BIRC6Q9NR09 4857 aa2.59□□□□□ -1.99
LINC00458-202ENST00000427299 TNXBP22105 4242 aa2.59□□□□□ -1.99
LINC00458-202ENST00000427299 EPPK1P58107 5090 aaKnown RBP2.59□□□□□ -2
LINC00458-202ENST00000427299 A0A1B0GU33 70 aa2.58□□□□□ -2
LINC00458-202ENST00000427299 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
LINC00458-202ENST00000427299 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
LINC00458-202ENST00000427299 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
LINC00458-202ENST00000427299 COX6B2Q6YFQ2 88 aa2.57□□□□□ -2
LINC00458-202ENST00000427299 C9orf92A6NGG3 77 aa2.56□□□□□ -2
LINC00458-202ENST00000427299 H0YAA0 97 aa2.56□□□□□ -2
LINC00458-202ENST00000427299 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
LINC00458-202ENST00000427299 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
LINC00458-202ENST00000427299 CSAG1Q6PB30 78 aa2.55□□□□□ -2
LINC00458-202ENST00000427299 HSPG2P98160 4391 aa2.54□□□□□ -2
LINC00458-202ENST00000427299 FAT1Q14517 4588 aa2.54□□□□□ -2
LINC00458-202ENST00000427299 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
LINC00458-202ENST00000427299 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
LINC00458-202ENST00000427299 RPL37P61927 97 aaKnown RBP2.51□□□□□ -2.01
LINC00458-202ENST00000427299 S4R3F8 94 aa2.51□□□□□ -2.01
LINC00458-202ENST00000427299 RYR2Q92736 4967 aa2.51□□□□□ -2.01
LINC00458-202ENST00000427299 FLG2Q5D862 2391 aaPredicted RBP2.5□□□□□ -2.01
LINC00458-202ENST00000427299 SMR3BP02814 79 aaPredicted RBP2.5□□□□□ -2.01
LINC00458-202ENST00000427299 KRTAP10-4P60372 401 aaPredicted RBP2.5□□□□□ -2.01
LINC00458-202ENST00000427299 R4GN34 69 aa2.5□□□□□ -2.01
LINC00458-202ENST00000427299 ROMO1P60602 79 aa2.49□□□□□ -2.01
LINC00458-202ENST00000427299 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
LINC00458-202ENST00000427299 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
LINC00458-202ENST00000427299 RYR1P21817 5038 aa2.48□□□□□ -2.01
LINC00458-202ENST00000427299 LRP1Q07954 4544 aaKnown RBP2.46□□□□□ -2.02
LINC00458-202ENST00000427299 Q5VSD8 79 aa2.45□□□□□ -2.02
LINC00458-202ENST00000427299 M0QZ58 72 aa2.41□□□□□ -2.02
LINC00458-202ENST00000427299 TPRXLQ17RH7 258 aa2.41□□□□□ -2.02
LINC00458-202ENST00000427299 DMBT1Q9UGM3 2413 aaPredicted RBP2.41□□□□□ -2.02
LINC00458-202ENST00000427299 A0A0D9SG42 100 aa2.4□□□□□ -2.03
LINC00458-202ENST00000427299 CRIPTQ9P021 101 aa2.4□□□□□ -2.03
LINC00458-202ENST00000427299 MYCBP2O75592 4640 aa2.39□□□□□ -2.03
LINC00458-202ENST00000427299 HERC2O95714 4834 aa2.39□□□□□ -2.03
LINC00458-202ENST00000427299 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
LINC00458-202ENST00000427299 P0C880 135 aa2.35□□□□□ -2.03
LINC00458-202ENST00000427299 KRTAP12-1P59990 96 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms