RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 CSMD3Q7Z407 3707 aa5.86□□□□□ -1.47
HDLBP-214ENST00000427183 COL7A1Q02388 2944 aa5.84□□□□□ -1.47
HDLBP-214ENST00000427183 FBN3Q75N90 2809 aa5.82□□□□□ -1.48
HDLBP-214ENST00000427183 INE1O15225 51 aa5.81□□□□□ -1.48
HDLBP-214ENST00000427183 DNAH8Q96JB1 4490 aa5.79□□□□□ -1.48
HDLBP-214ENST00000427183 DNAH2Q9P225 4427 aa5.79□□□□□ -1.48
HDLBP-214ENST00000427183 LYSTQ99698 3801 aa5.78□□□□□ -1.48
HDLBP-214ENST00000427183 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
HDLBP-214ENST00000427183 PRKDCP78527 4128 aaKnown RBP5.75□□□□□ -1.49
HDLBP-214ENST00000427183 DNAH6Q9C0G6 4158 aa5.74□□□□□ -1.49
HDLBP-214ENST00000427183 DNAH7Q8WXX0 4024 aa5.74□□□□□ -1.49
HDLBP-214ENST00000427183 DNAH11Q96DT5 4516 aa5.74□□□□□ -1.49
HDLBP-214ENST00000427183 HECTD4Q9Y4D8 3996 aa5.72□□□□□ -1.49
HDLBP-214ENST00000427183 KRTAP10-4P60372 401 aaPredicted RBP5.7□□□□□ -1.5
HDLBP-214ENST00000427183 KMT2AQ03164 3969 aa5.7□□□□□ -1.5
HDLBP-214ENST00000427183 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
HDLBP-214ENST00000427183 DNAH5Q8TE73 4624 aa5.66□□□□□ -1.5
HDLBP-214ENST00000427183 FRAS1Q86XX4 4008 aa5.61□□□□□ -1.51
HDLBP-214ENST00000427183 LRP1BQ9NZR2 4599 aa5.6□□□□□ -1.51
HDLBP-214ENST00000427183 DNHD1Q96M86 4753 aa5.55□□□□□ -1.52
HDLBP-214ENST00000427183 DYNC1H1Q14204 4646 aaKnown RBP5.54□□□□□ -1.52
HDLBP-214ENST00000427183 SACSQ9NZJ4 4579 aa5.53□□□□□ -1.52
HDLBP-214ENST00000427183 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
HDLBP-214ENST00000427183 KRTAP3-2Q9BYR7 98 aa5.5□□□□□ -1.53
HDLBP-214ENST00000427183 VPS13BQ7Z7G8 4022 aa5.5□□□□□ -1.53
HDLBP-214ENST00000427183 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
HDLBP-214ENST00000427183 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
HDLBP-214ENST00000427183 FAT2Q9NYQ8 4349 aa5.47□□□□□ -1.53
HDLBP-214ENST00000427183 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
HDLBP-214ENST00000427183 KRTAP3-3Q9BYR6 98 aa5.47□□□□□ -1.53
HDLBP-214ENST00000427183 KRTAP4-5Q9BYR2 181 aa5.44□□□□□ -1.54
HDLBP-214ENST00000427183 HYDINQ4G0P3 5121 aa5.41□□□□□ -1.54
HDLBP-214ENST00000427183 PKD1P98161 4303 aa5.41□□□□□ -1.54
HDLBP-214ENST00000427183 FAT1Q14517 4588 aa5.39□□□□□ -1.55
HDLBP-214ENST00000427183 APOBP04114 4563 aaKnown RBP5.34□□□□□ -1.55
HDLBP-214ENST00000427183 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
HDLBP-214ENST00000427183 RYR2Q92736 4967 aa5.26□□□□□ -1.57
HDLBP-214ENST00000427183 PKHD1L1Q86WI1 4243 aa5.23□□□□□ -1.57
HDLBP-214ENST00000427183 PKHD1P08F94 4074 aa5.22□□□□□ -1.57
HDLBP-214ENST00000427183 FAT3Q8TDW7 4589 aa5.21□□□□□ -1.58
HDLBP-214ENST00000427183 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
HDLBP-214ENST00000427183 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
HDLBP-214ENST00000427183 RYR1P21817 5038 aa5.13□□□□□ -1.59
HDLBP-214ENST00000427183 LRP1Q07954 4544 aaKnown RBP5.09□□□□□ -1.59
HDLBP-214ENST00000427183 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
HDLBP-214ENST00000427183 HSPG2P98160 4391 aa5.09□□□□□ -1.6
HDLBP-214ENST00000427183 TNXBP22105 4242 aa5.06□□□□□ -1.6
HDLBP-214ENST00000427183 RYR3Q15413 4870 aa5.03□□□□□ -1.6
HDLBP-214ENST00000427183 MYCBP2O75592 4640 aa5□□□□□ -1.61
HDLBP-214ENST00000427183 KIAA1109Q2LD37 5005 aa4.99□□□□□ -1.61
HDLBP-214ENST00000427183 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
HDLBP-214ENST00000427183 KMT2CQ8NEZ4 4911 aaKnown RBP4.94□□□□□ -1.62
HDLBP-214ENST00000427183 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
HDLBP-214ENST00000427183 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
HDLBP-214ENST00000427183 SPRR2FQ96RM1 72 aa4.83□□□□□ -1.64
HDLBP-214ENST00000427183 LRP2P98164 4655 aa4.8□□□□□ -1.64
HDLBP-214ENST00000427183 MT1HP80294 61 aa4.76□□□□□ -1.65
HDLBP-214ENST00000427183 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
HDLBP-214ENST00000427183 LPAP08519 4548 aa4.75□□□□□ -1.65
HDLBP-214ENST00000427183 MT2AP02795 61 aa4.71□□□□□ -1.65
HDLBP-214ENST00000427183 EPPK1P58107 5090 aaKnown RBP4.7□□□□□ -1.66
HDLBP-214ENST00000427183 BIRC6Q9NR09 4857 aa4.7□□□□□ -1.66
HDLBP-214ENST00000427183 HERC2O95714 4834 aa4.68□□□□□ -1.66
HDLBP-214ENST00000427183 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
HDLBP-214ENST00000427183 LCE3BQ5TA77 95 aa4.65□□□□□ -1.66
HDLBP-214ENST00000427183 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
HDLBP-214ENST00000427183 MT1FP04733 61 aa4.62□□□□□ -1.67
HDLBP-214ENST00000427183 KRTAP19-2Q3LHN2 52 aa4.61□□□□□ -1.67
HDLBP-214ENST00000427183 ABCA13Q86UQ4 5058 aa4.6□□□□□ -1.67
HDLBP-214ENST00000427183 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
HDLBP-214ENST00000427183 HERC1Q15751 4861 aa4.52□□□□□ -1.69
HDLBP-214ENST00000427183 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
HDLBP-214ENST00000427183 SPRR2EP22531 72 aa4.51□□□□□ -1.69
HDLBP-214ENST00000427183 SPRR2BP35325 72 aa4.51□□□□□ -1.69
HDLBP-214ENST00000427183 SPRR2AP35326 72 aa4.51□□□□□ -1.69
HDLBP-214ENST00000427183 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
HDLBP-214ENST00000427183 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
HDLBP-214ENST00000427183 MT1GP13640 62 aa4.48□□□□□ -1.69
HDLBP-214ENST00000427183 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
HDLBP-214ENST00000427183 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
HDLBP-214ENST00000427183 SPRR2DP22532 72 aa4.34□□□□□ -1.71
HDLBP-214ENST00000427183 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
HDLBP-214ENST00000427183 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
HDLBP-214ENST00000427183 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
HDLBP-214ENST00000427183 LCE2BO14633 110 aa4.3□□□□□ -1.72
HDLBP-214ENST00000427183 MT1BP07438 61 aa4.3□□□□□ -1.72
HDLBP-214ENST00000427183 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
HDLBP-214ENST00000427183 MT1XP80297 61 aa4.28□□□□□ -1.72
HDLBP-214ENST00000427183 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
HDLBP-214ENST00000427183 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
HDLBP-214ENST00000427183 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
HDLBP-214ENST00000427183 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
HDLBP-214ENST00000427183 KRTAP9-3Q9BYQ3 159 aa4.22□□□□□ -1.73
HDLBP-214ENST00000427183 RNF213Q63HN8 5207 aa4.22□□□□□ -1.73
HDLBP-214ENST00000427183 MUC2Q02817 5179 aa4.17□□□□□ -1.74
HDLBP-214ENST00000427183 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
HDLBP-214ENST00000427183 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
HDLBP-214ENST00000427183 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
HDLBP-214ENST00000427183 PRM1P04553 51 aa4.05□□□□□ -1.76
HDLBP-214ENST00000427183 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms