RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 DNAH10Q8IVF4 4471 aa6.69□□□□□ -1.34
SREBF2-202ENST00000424354 CMYA5Q8N3K9 4069 aa6.66□□□□□ -1.34
SREBF2-202ENST00000424354 PRKDCP78527 4128 aaKnown RBP6.63□□□□□ -1.35
SREBF2-202ENST00000424354 MT1HL1P0DM35 61 aa6.62□□□□□ -1.35
SREBF2-202ENST00000424354 DNAH11Q96DT5 4516 aa6.62□□□□□ -1.35
SREBF2-202ENST00000424354 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
SREBF2-202ENST00000424354 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
SREBF2-202ENST00000424354 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
SREBF2-202ENST00000424354 DNAH5Q8TE73 4624 aa6.53□□□□□ -1.36
SREBF2-202ENST00000424354 DNAH17Q9UFH2 4485 aa6.51□□□□□ -1.37
SREBF2-202ENST00000424354 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
SREBF2-202ENST00000424354 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
SREBF2-202ENST00000424354 FAT1Q14517 4588 aa6.45□□□□□ -1.38
SREBF2-202ENST00000424354 INE1O15225 51 aa6.42□□□□□ -1.38
SREBF2-202ENST00000424354 KMT2AQ03164 3969 aa6.42□□□□□ -1.38
SREBF2-202ENST00000424354 DNAH7Q8WXX0 4024 aa6.4□□□□□ -1.38
SREBF2-202ENST00000424354 LYSTQ99698 3801 aa6.38□□□□□ -1.39
SREBF2-202ENST00000424354 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
SREBF2-202ENST00000424354 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
SREBF2-202ENST00000424354 KRTAP3-2Q9BYR7 98 aa6.32□□□□□ -1.4
SREBF2-202ENST00000424354 DNAH2Q9P225 4427 aa6.3□□□□□ -1.4
SREBF2-202ENST00000424354 DNAH8Q96JB1 4490 aa6.3□□□□□ -1.4
SREBF2-202ENST00000424354 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
SREBF2-202ENST00000424354 FAT2Q9NYQ8 4349 aa6.27□□□□□ -1.41
SREBF2-202ENST00000424354 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
SREBF2-202ENST00000424354 RYR2Q92736 4967 aa6.24□□□□□ -1.41
SREBF2-202ENST00000424354 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
SREBF2-202ENST00000424354 RYR1P21817 5038 aa6.22□□□□□ -1.41
SREBF2-202ENST00000424354 SACSQ9NZJ4 4579 aa6.2□□□□□ -1.42
SREBF2-202ENST00000424354 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
SREBF2-202ENST00000424354 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
SREBF2-202ENST00000424354 HYDINQ4G0P3 5121 aa6.13□□□□□ -1.43
SREBF2-202ENST00000424354 RYR3Q15413 4870 aa6.12□□□□□ -1.43
SREBF2-202ENST00000424354 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
SREBF2-202ENST00000424354 VPS13BQ7Z7G8 4022 aa6.09□□□□□ -1.43
SREBF2-202ENST00000424354 FRAS1Q86XX4 4008 aa6.06□□□□□ -1.44
SREBF2-202ENST00000424354 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
SREBF2-202ENST00000424354 APOBP04114 4563 aaKnown RBP6.06□□□□□ -1.44
SREBF2-202ENST00000424354 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
SREBF2-202ENST00000424354 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
SREBF2-202ENST00000424354 PKHD1P08F94 4074 aa6.01□□□□□ -1.45
SREBF2-202ENST00000424354 PKHD1L1Q86WI1 4243 aa6□□□□□ -1.45
SREBF2-202ENST00000424354 KRTAP12-3P60328 96 aa6□□□□□ -1.45
SREBF2-202ENST00000424354 KMT2CQ8NEZ4 4911 aaKnown RBP5.99□□□□□ -1.45
SREBF2-202ENST00000424354 KRTAP17-1Q9BYP8 105 aa5.96□□□□□ -1.46
SREBF2-202ENST00000424354 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
SREBF2-202ENST00000424354 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
SREBF2-202ENST00000424354 HSPG2P98160 4391 aa5.84□□□□□ -1.47
SREBF2-202ENST00000424354 HERC2O95714 4834 aa5.84□□□□□ -1.48
SREBF2-202ENST00000424354 PKD1P98161 4303 aa5.81□□□□□ -1.48
SREBF2-202ENST00000424354 HERC1Q15751 4861 aa5.8□□□□□ -1.48
SREBF2-202ENST00000424354 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
SREBF2-202ENST00000424354 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
SREBF2-202ENST00000424354 LRP2P98164 4655 aa5.78□□□□□ -1.48
SREBF2-202ENST00000424354 MT1HP80294 61 aa5.7□□□□□ -1.5
SREBF2-202ENST00000424354 EPPK1P58107 5090 aaKnown RBP5.65□□□□□ -1.51
SREBF2-202ENST00000424354 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
SREBF2-202ENST00000424354 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
SREBF2-202ENST00000424354 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
SREBF2-202ENST00000424354 ABCA13Q86UQ4 5058 aa5.52□□□□□ -1.53
SREBF2-202ENST00000424354 LPAP08519 4548 aa5.5□□□□□ -1.53
SREBF2-202ENST00000424354 TNXBP22105 4242 aa5.45□□□□□ -1.54
SREBF2-202ENST00000424354 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
SREBF2-202ENST00000424354 MT2AP02795 61 aa5.43□□□□□ -1.54
SREBF2-202ENST00000424354 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
SREBF2-202ENST00000424354 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
SREBF2-202ENST00000424354 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
SREBF2-202ENST00000424354 MT1FP04733 61 aa5.27□□□□□ -1.57
SREBF2-202ENST00000424354 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
SREBF2-202ENST00000424354 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
SREBF2-202ENST00000424354 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
SREBF2-202ENST00000424354 RNF213Q63HN8 5207 aa5.25□□□□□ -1.57
SREBF2-202ENST00000424354 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
SREBF2-202ENST00000424354 MUC2Q02817 5179 aa5.24□□□□□ -1.57
SREBF2-202ENST00000424354 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
SREBF2-202ENST00000424354 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
SREBF2-202ENST00000424354 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
SREBF2-202ENST00000424354 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
SREBF2-202ENST00000424354 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
SREBF2-202ENST00000424354 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
SREBF2-202ENST00000424354 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
SREBF2-202ENST00000424354 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
SREBF2-202ENST00000424354 UBR4Q5T4S7 5183 aa5.11□□□□□ -1.59
SREBF2-202ENST00000424354 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
SREBF2-202ENST00000424354 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
SREBF2-202ENST00000424354 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
SREBF2-202ENST00000424354 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
SREBF2-202ENST00000424354 SPRR2EP22531 72 aa5□□□□□ -1.61
SREBF2-202ENST00000424354 SPRR2BP35325 72 aa5□□□□□ -1.61
SREBF2-202ENST00000424354 SPRR2AP35326 72 aa5□□□□□ -1.61
SREBF2-202ENST00000424354 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
SREBF2-202ENST00000424354 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
SREBF2-202ENST00000424354 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
SREBF2-202ENST00000424354 MT1BP07438 61 aa4.9□□□□□ -1.63
SREBF2-202ENST00000424354 MT1XP80297 61 aa4.85□□□□□ -1.63
SREBF2-202ENST00000424354 SPRR2DP22532 72 aa4.85□□□□□ -1.63
SREBF2-202ENST00000424354 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
SREBF2-202ENST00000424354 LCE2BO14633 110 aa4.8□□□□□ -1.64
SREBF2-202ENST00000424354 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
SREBF2-202ENST00000424354 MT1GP13640 62 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms