RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TEN1Q86WV5 123 aa2.79□□□□□ -1.96
SDCBP-203ENST00000424270 A8MUN3 132 aa2.78□□□□□ -1.96
SDCBP-203ENST00000424270 SNCGO76070 127 aa2.78□□□□□ -1.96
SDCBP-203ENST00000424270 TRACP01848 142 aa2.78□□□□□ -1.96
SDCBP-203ENST00000424270 KRTAP19-8Q3LI54 63 aa2.78□□□□□ -1.96
SDCBP-203ENST00000424270 H1FX-AS1Q4G0G2 97 aa2.78□□□□□ -1.96
SDCBP-203ENST00000424270 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
SDCBP-203ENST00000424270 PRR15Q8IV56 129 aa2.78□□□□□ -1.96
SDCBP-203ENST00000424270 A0A087WSZ3 146 aa2.77□□□□□ -1.97
SDCBP-203ENST00000424270 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
SDCBP-203ENST00000424270 IGKV4-1P06312 121 aa2.77□□□□□ -1.97
SDCBP-203ENST00000424270 SMIM11BQ8TCY0 68 aa2.77□□□□□ -1.97
SDCBP-203ENST00000424270 ZCCHC13Q8WW36 166 aaKnown RBP2.77□□□□□ -1.97
SDCBP-203ENST00000424270 A0A1B0GW54 56 aa2.76□□□□□ -1.97
SDCBP-203ENST00000424270 H3BQ85 93 aa2.76□□□□□ -1.97
SDCBP-203ENST00000424270 BAALC-AS2P0C853 105 aa2.76□□□□□ -1.97
SDCBP-203ENST00000424270 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
SDCBP-203ENST00000424270 Q6ZQY7 126 aa2.75□□□□□ -1.97
SDCBP-203ENST00000424270 DNAL4O96015 105 aa2.74□□□□□ -1.97
SDCBP-203ENST00000424270 ACYP1P07311 99 aa2.74□□□□□ -1.97
SDCBP-203ENST00000424270 SPRR2GQ9BYE4 73 aa2.74□□□□□ -1.97
SDCBP-203ENST00000424270 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
SDCBP-203ENST00000424270 TMEM256-PLSCR3K7ERE1 68 aa2.73□□□□□ -1.97
SDCBP-203ENST00000424270 LCA10Q71F78 164 aa2.73□□□□□ -1.97
SDCBP-203ENST00000424270 DSCR8Q96T75 97 aa2.73□□□□□ -1.97
SDCBP-203ENST00000424270 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
SDCBP-203ENST00000424270 hADV29S1A0JD25 119 aa2.72□□□□□ -1.97
SDCBP-203ENST00000424270 LINC00575Q6W349 94 aa2.72□□□□□ -1.97
SDCBP-203ENST00000424270 C8orf17Q9NRJ1 99 aa2.72□□□□□ -1.97
SDCBP-203ENST00000424270 ORMDL1Q9P0S3 153 aa2.72□□□□□ -1.97
SDCBP-203ENST00000424270 JMJD7-PLA2G4BH0Y9G9 81 aa2.71□□□□□ -1.98
SDCBP-203ENST00000424270 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
SDCBP-203ENST00000424270 BPY2O14599 106 aa2.7□□□□□ -1.98
SDCBP-203ENST00000424270 PDE6GP18545 87 aa2.7□□□□□ -1.98
SDCBP-203ENST00000424270 K7ERS5 55 aa2.69□□□□□ -1.98
SDCBP-203ENST00000424270 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
SDCBP-203ENST00000424270 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.69□□□□□ -1.98
SDCBP-203ENST00000424270 LINC00643Q86TS7 51 aa2.69□□□□□ -1.98
SDCBP-203ENST00000424270 BRK1Q8WUW1 75 aa2.69□□□□□ -1.98
SDCBP-203ENST00000424270 IGKV2D-30A0A075B6S6 120 aa2.68□□□□□ -1.98
SDCBP-203ENST00000424270 MT-ATP8P03928 68 aa2.68□□□□□ -1.98
SDCBP-203ENST00000424270 CCKP06307 115 aa2.68□□□□□ -1.98
SDCBP-203ENST00000424270 HIST1H4AP62805 103 aaKnown RBP2.68□□□□□ -1.98
SDCBP-203ENST00000424270 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
SDCBP-203ENST00000424270 MT4P47944 62 aa2.67□□□□□ -1.98
SDCBP-203ENST00000424270 RBM3P98179 157 aaKnown RBP2.67□□□□□ -1.98
SDCBP-203ENST00000424270 LOC110117498A0A087WWA1 95 aa2.66□□□□□ -1.98
SDCBP-203ENST00000424270 A0A1B0GVX0 72 aa2.66□□□□□ -1.98
SDCBP-203ENST00000424270 KLKP1Q107X0 134 aa2.66□□□□□ -1.98
SDCBP-203ENST00000424270 LINC01554Q52M75 96 aa2.66□□□□□ -1.98
SDCBP-203ENST00000424270 C14orf132Q9NPU4 83 aa2.66□□□□□ -1.98
SDCBP-203ENST00000424270 IGKV3D-7A0A0C4DH55 119 aa2.65□□□□□ -1.99
SDCBP-203ENST00000424270 TMEM258P61165 79 aa2.65□□□□□ -1.99
SDCBP-203ENST00000424270 ATP5EP2Q5VTU8 51 aa2.64□□□□□ -1.99
SDCBP-203ENST00000424270 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
SDCBP-203ENST00000424270 Q6ZQT0 140 aa2.64□□□□□ -1.99
SDCBP-203ENST00000424270 UBL5Q9BZL1 73 aa2.64□□□□□ -1.99
SDCBP-203ENST00000424270 TRBV7-4A0A0J9YYF1 115 aa2.63□□□□□ -1.99
SDCBP-203ENST00000424270 UQCRQO14949 82 aa2.63□□□□□ -1.99
SDCBP-203ENST00000424270 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
SDCBP-203ENST00000424270 CCDC179H3BU77 68 aa2.62□□□□□ -1.99
SDCBP-203ENST00000424270 KRTAP10-7P60409 375 aaPredicted RBP2.62□□□□□ -1.99
SDCBP-203ENST00000424270 NDUFAF8A1L188 74 aa2.61□□□□□ -1.99
SDCBP-203ENST00000424270 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
SDCBP-203ENST00000424270 C7orf65Q6ZTY9 151 aa2.61□□□□□ -1.99
SDCBP-203ENST00000424270 S4R3F8 94 aa2.61□□□□□ -1.99
SDCBP-203ENST00000424270 A6NED7 52 aa2.6□□□□□ -1.99
SDCBP-203ENST00000424270 ATOX1O00244 68 aa2.6□□□□□ -1.99
SDCBP-203ENST00000424270 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
SDCBP-203ENST00000424270 PLAC4Q8WY50 150 aa2.6□□□□□ -1.99
SDCBP-203ENST00000424270 CRIPTQ9P021 101 aa2.6□□□□□ -1.99
SDCBP-203ENST00000424270 MT1XP80297 61 aa2.59□□□□□ -1.99
SDCBP-203ENST00000424270 NREPQ16612 68 aa2.59□□□□□ -1.99
SDCBP-203ENST00000424270 NDUFB1O75438 58 aa2.58□□□□□ -2
SDCBP-203ENST00000424270 LINC00472Q9H8W2 130 aa2.58□□□□□ -2
SDCBP-203ENST00000424270 MT3P25713 68 aa2.57□□□□□ -2
SDCBP-203ENST00000424270 ADM2Q7Z4H4 148 aa2.56□□□□□ -2
SDCBP-203ENST00000424270 SERP2Q8N6R1 65 aa2.56□□□□□ -2
SDCBP-203ENST00000424270 COX7CP15954 63 aa2.55□□□□□ -2
SDCBP-203ENST00000424270 SERP1Q9Y6X1 66 aa2.55□□□□□ -2
SDCBP-203ENST00000424270 A0A087WVE0 104 aa2.54□□□□□ -2
SDCBP-203ENST00000424270 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
SDCBP-203ENST00000424270 TRAV7A0A075B6U4 112 aa2.53□□□□□ -2
SDCBP-203ENST00000424270 LCE1EQ5T753 118 aa2.53□□□□□ -2
SDCBP-203ENST00000424270 SPANXA2-OT1Q8N9U9 137 aa2.53□□□□□ -2
SDCBP-203ENST00000424270 H3BPC8 53 aa2.5□□□□□ -2.01
SDCBP-203ENST00000424270 K7EQZ3 153 aa2.49□□□□□ -2.01
SDCBP-203ENST00000424270 NDUFC1O43677 76 aa2.49□□□□□ -2.01
SDCBP-203ENST00000424270 Q5W150 140 aa2.48□□□□□ -2.01
SDCBP-203ENST00000424270 C20orf197Q8N268 126 aa2.48□□□□□ -2.01
SDCBP-203ENST00000424270 Q8N9L7 120 aa2.48□□□□□ -2.01
SDCBP-203ENST00000424270 C1orf64Q8NEQ6 169 aa2.48□□□□□ -2.01
SDCBP-203ENST00000424270 HCG22E2RYF7 251 aa2.47□□□□□ -2.01
SDCBP-203ENST00000424270 ATP5EP56381 51 aaPredicted RBP2.47□□□□□ -2.01
SDCBP-203ENST00000424270 MRPL34Q9BQ48 92 aaKnown RBP2.47□□□□□ -2.01
SDCBP-203ENST00000424270 hDV103S1A0JD37 113 aa2.46□□□□□ -2.02
SDCBP-203ENST00000424270 TMEM254Q8TBM7 123 aa2.46□□□□□ -2.02
SDCBP-203ENST00000424270 CYSTM1Q9H1C7 97 aa2.46□□□□□ -2.02
SDCBP-203ENST00000424270 H0YAA0 97 aa2.45□□□□□ -2.02
SDCBP-203ENST00000424270 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms