RNA–Protein interactions for RNA: ENST00000424155.6

TMED3-202, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 3 BASIC

Gene TMED3, Length 16,555 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-202ENST00000424155 SPENQ96T58 3664 aaKnown RBP2.55□□□□□ -2
TMED3-202ENST00000424155 DMDP11532 3685 aa2.53□□□□□ -2
TMED3-202ENST00000424155 MT1HL1P0DM35 61 aa2.52□□□□□ -2.01
TMED3-202ENST00000424155 DNAH17Q9UFH2 4485 aa2.49□□□□□ -2.01
TMED3-202ENST00000424155 FAT1Q14517 4588 aa2.48□□□□□ -2.01
TMED3-202ENST00000424155 MUC3AQ02505 3323 aa2.48□□□□□ -2.01
TMED3-202ENST00000424155 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
TMED3-202ENST00000424155 DNAH9Q9NYC9 4486 aa2.46□□□□□ -2.02
TMED3-202ENST00000424155 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
TMED3-202ENST00000424155 APOBP04114 4563 aaKnown RBP2.44□□□□□ -2.02
TMED3-202ENST00000424155 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
TMED3-202ENST00000424155 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
TMED3-202ENST00000424155 CSMD2Q7Z408 3487 aa2.39□□□□□ -2.03
TMED3-202ENST00000424155 SACSQ9NZJ4 4579 aa2.37□□□□□ -2.03
TMED3-202ENST00000424155 VPS13DQ5THJ4 4388 aa2.36□□□□□ -2.03
TMED3-202ENST00000424155 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
TMED3-202ENST00000424155 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
TMED3-202ENST00000424155 SPRR2GQ9BYE4 73 aa2.34□□□□□ -2.03
TMED3-202ENST00000424155 MYCBP2O75592 4640 aa2.34□□□□□ -2.03
TMED3-202ENST00000424155 PLECQ15149 4684 aaKnown RBP2.34□□□□□ -2.04
TMED3-202ENST00000424155 VPS13CQ709C8 3753 aa2.34□□□□□ -2.04
TMED3-202ENST00000424155 KRTAP4-1Q9BYQ7 146 aa2.3□□□□□ -2.04
TMED3-202ENST00000424155 KRTAP4-5Q9BYR2 181 aa2.28□□□□□ -2.04
TMED3-202ENST00000424155 AKAP9Q99996 3911 aa2.27□□□□□ -2.05
TMED3-202ENST00000424155 KRTAP19-4Q3LI73 84 aa2.26□□□□□ -2.05
TMED3-202ENST00000424155 DNAH5Q8TE73 4624 aa2.26□□□□□ -2.05
TMED3-202ENST00000424155 VPS13BQ7Z7G8 4022 aa2.23□□□□□ -2.05
TMED3-202ENST00000424155 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
TMED3-202ENST00000424155 KRTAP10-7P60409 375 aaPredicted RBP2.22□□□□□ -2.05
TMED3-202ENST00000424155 ANK2Q01484 3957 aa2.21□□□□□ -2.06
TMED3-202ENST00000424155 FRAS1Q86XX4 4008 aa2.2□□□□□ -2.06
TMED3-202ENST00000424155 DYNC2H1Q8NCM8 4307 aaKnown RBP2.2□□□□□ -2.06
TMED3-202ENST00000424155 MT2AP02795 61 aa2.2□□□□□ -2.06
TMED3-202ENST00000424155 DYNC1H1Q14204 4646 aaKnown RBP2.2□□□□□ -2.06
TMED3-202ENST00000424155 DNAH3Q8TD57 4116 aa2.19□□□□□ -2.06
TMED3-202ENST00000424155 FAT3Q8TDW7 4589 aa2.19□□□□□ -2.06
TMED3-202ENST00000424155 FAT2Q9NYQ8 4349 aa2.18□□□□□ -2.06
TMED3-202ENST00000424155 BSNQ9UPA5 3926 aa2.17□□□□□ -2.06
TMED3-202ENST00000424155 MT1FP04733 61 aa2.17□□□□□ -2.06
TMED3-202ENST00000424155 PKD1P98161 4303 aa2.16□□□□□ -2.06
TMED3-202ENST00000424155 MT1HP80294 61 aa2.16□□□□□ -2.06
TMED3-202ENST00000424155 LCE3BQ5TA77 95 aa2.16□□□□□ -2.06
TMED3-202ENST00000424155 KRTAP19-1Q8IUB9 90 aa2.15□□□□□ -2.07
TMED3-202ENST00000424155 HSPG2P98160 4391 aa2.14□□□□□ -2.07
TMED3-202ENST00000424155 MT1XP80297 61 aa2.14□□□□□ -2.07
TMED3-202ENST00000424155 DNAH7Q8WXX0 4024 aa2.13□□□□□ -2.07
TMED3-202ENST00000424155 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
TMED3-202ENST00000424155 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
TMED3-202ENST00000424155 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
TMED3-202ENST00000424155 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
TMED3-202ENST00000424155 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
TMED3-202ENST00000424155 DNAH6Q9C0G6 4158 aa2.12□□□□□ -2.07
TMED3-202ENST00000424155 ZNF469Q96JG9 3925 aaPredicted RBP2.11□□□□□ -2.07
TMED3-202ENST00000424155 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
TMED3-202ENST00000424155 MT1GP13640 62 aa2.09□□□□□ -2.07
TMED3-202ENST00000424155 PRM1P04553 51 aa2.08□□□□□ -2.08
TMED3-202ENST00000424155 PRKDCP78527 4128 aaKnown RBP2.07□□□□□ -2.08
TMED3-202ENST00000424155 CMYA5Q8N3K9 4069 aa2.06□□□□□ -2.08
TMED3-202ENST00000424155 KMT2AQ03164 3969 aa2.05□□□□□ -2.08
TMED3-202ENST00000424155 KRTAP4-8A0A0G2JLE6 195 aa2.04□□□□□ -2.08
TMED3-202ENST00000424155 KRTAP4-8Q9BYQ9 185 aa2.04□□□□□ -2.08
TMED3-202ENST00000424155 LYSTQ99698 3801 aa2.03□□□□□ -2.08
TMED3-202ENST00000424155 KRTAP4-7Q9BYR0 210 aa2.03□□□□□ -2.08
TMED3-202ENST00000424155 MT1BP07438 61 aa2.02□□□□□ -2.09
TMED3-202ENST00000424155 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
TMED3-202ENST00000424155 PKHD1L1Q86WI1 4243 aa2□□□□□ -2.09
TMED3-202ENST00000424155 RYR1P21817 5038 aa1.98□□□□□ -2.09
TMED3-202ENST00000424155 HECTD4Q9Y4D8 3996 aa1.98□□□□□ -2.09
TMED3-202ENST00000424155 MT1LQ93083 61 aa1.97□□□□□ -2.09
TMED3-202ENST00000424155 MT3P25713 68 aa1.97□□□□□ -2.09
TMED3-202ENST00000424155 TNXBP22105 4242 aa1.96□□□□□ -2.1
TMED3-202ENST00000424155 KRTAP9-8Q9BYQ0 159 aa1.96□□□□□ -2.1
TMED3-202ENST00000424155 KRTAP9-3Q9BYQ3 159 aa1.93□□□□□ -2.1
TMED3-202ENST00000424155 LCE1AQ5T7P2 110 aa1.92□□□□□ -2.1
TMED3-202ENST00000424155 KRTAP4-9Q9BYQ8 210 aa1.92□□□□□ -2.1
TMED3-202ENST00000424155 FLGP20930 4061 aaPredicted RBP1.91□□□□□ -2.1
TMED3-202ENST00000424155 KRTAP9-6A8MVA2 160 aa1.91□□□□□ -2.1
TMED3-202ENST00000424155 LOC100996750A0A140TA64 210 aa1.91□□□□□ -2.1
TMED3-202ENST00000424155 MT1EP04732 61 aa1.9□□□□□ -2.11
TMED3-202ENST00000424155 MUC17Q685J3 4493 aa1.9□□□□□ -2.11
TMED3-202ENST00000424155 KRTAP17-1Q9BYP8 105 aa1.88□□□□□ -2.11
TMED3-202ENST00000424155 HERC2O95714 4834 aa1.88□□□□□ -2.11
TMED3-202ENST00000424155 LCE2CQ5TA81 110 aa1.88□□□□□ -2.11
TMED3-202ENST00000424155 STARD9Q9P2P6 4700 aa1.87□□□□□ -2.11
TMED3-202ENST00000424155 LRP2P98164 4655 aa1.87□□□□□ -2.11
TMED3-202ENST00000424155 KRTAP2-2Q9BYT5 123 aa1.87□□□□□ -2.11
TMED3-202ENST00000424155 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
TMED3-202ENST00000424155 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
TMED3-202ENST00000424155 MT1AP04731 61 aa1.85□□□□□ -2.11
TMED3-202ENST00000424155 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
TMED3-202ENST00000424155 KRTAP9-7A8MTY7 169 aa1.84□□□□□ -2.11
TMED3-202ENST00000424155 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
TMED3-202ENST00000424155 LCE1EQ5T753 118 aa1.83□□□□□ -2.12
TMED3-202ENST00000424155 KMT2CQ8NEZ4 4911 aaKnown RBP1.82□□□□□ -2.12
TMED3-202ENST00000424155 KRTAP6-3Q3LI67 103 aa1.82□□□□□ -2.12
TMED3-202ENST00000424155 SPRR2EP22531 72 aa1.81□□□□□ -2.12
TMED3-202ENST00000424155 SPRR2BP35325 72 aa1.81□□□□□ -2.12
TMED3-202ENST00000424155 SPRR2AP35326 72 aa1.81□□□□□ -2.12
TMED3-202ENST00000424155 KMT2DO14686 5537 aa1.8□□□□□ -2.12
TMED3-202ENST00000424155 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms