RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 A0A1B0GU33 70 aa6.34□□□□□ -1.39
ERCC1-204ENST00000423698 HSPG2P98160 4391 aa6.33□□□□□ -1.4
ERCC1-204ENST00000423698 J3QL48 77 aa6.31□□□□□ -1.4
ERCC1-204ENST00000423698 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
ERCC1-204ENST00000423698 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
ERCC1-204ENST00000423698 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
ERCC1-204ENST00000423698 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
ERCC1-204ENST00000423698 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
ERCC1-204ENST00000423698 SPINT4Q6UDR6 99 aa6.29□□□□□ -1.4
ERCC1-204ENST00000423698 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
ERCC1-204ENST00000423698 A0A0D9SG42 100 aa6.26□□□□□ -1.41
ERCC1-204ENST00000423698 LPAP08519 4548 aa6.26□□□□□ -1.41
ERCC1-204ENST00000423698 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
ERCC1-204ENST00000423698 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
ERCC1-204ENST00000423698 Q5VSD8 79 aa6.23□□□□□ -1.41
ERCC1-204ENST00000423698 SEC61BP60468 96 aaKnown RBP6.22□□□□□ -1.41
ERCC1-204ENST00000423698 RYR1P21817 5038 aa6.2□□□□□ -1.42
ERCC1-204ENST00000423698 LUZP6Q538Z0 58 aa6.2□□□□□ -1.42
ERCC1-204ENST00000423698 K7ERS5 55 aa6.19□□□□□ -1.42
ERCC1-204ENST00000423698 TNXBP22105 4242 aa6.19□□□□□ -1.42
ERCC1-204ENST00000423698 RPS29P62273 56 aaKnown RBP6.18□□□□□ -1.42
ERCC1-204ENST00000423698 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
ERCC1-204ENST00000423698 LRP2P98164 4655 aa6.17□□□□□ -1.42
ERCC1-204ENST00000423698 TPRXLQ17RH7 258 aa6.15□□□□□ -1.42
ERCC1-204ENST00000423698 KRTAP10-8P60410 259 aa6.14□□□□□ -1.43
ERCC1-204ENST00000423698 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
ERCC1-204ENST00000423698 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
ERCC1-204ENST00000423698 XP32Q5T750 250 aa6.06□□□□□ -1.44
ERCC1-204ENST00000423698 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
ERCC1-204ENST00000423698 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
ERCC1-204ENST00000423698 MUC2Q02817 5179 aa5.99□□□□□ -1.45
ERCC1-204ENST00000423698 KRTAP3-3Q9BYR6 98 aa5.96□□□□□ -1.45
ERCC1-204ENST00000423698 S4R3F8 94 aa5.95□□□□□ -1.46
ERCC1-204ENST00000423698 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
ERCC1-204ENST00000423698 KRTAP10-6P60371 365 aaPredicted RBP5.94□□□□□ -1.46
ERCC1-204ENST00000423698 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
ERCC1-204ENST00000423698 HERC2O95714 4834 aa5.88□□□□□ -1.47
ERCC1-204ENST00000423698 KRTAP3-2Q9BYR7 98 aa5.85□□□□□ -1.47
ERCC1-204ENST00000423698 HERC1Q15751 4861 aa5.81□□□□□ -1.48
ERCC1-204ENST00000423698 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
ERCC1-204ENST00000423698 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
ERCC1-204ENST00000423698 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
ERCC1-204ENST00000423698 M0QZ58 72 aa5.67□□□□□ -1.5
ERCC1-204ENST00000423698 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
ERCC1-204ENST00000423698 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
ERCC1-204ENST00000423698 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
ERCC1-204ENST00000423698 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
ERCC1-204ENST00000423698 R4GN34 69 aa5.62□□□□□ -1.51
ERCC1-204ENST00000423698 MUC17Q685J3 4493 aa5.58□□□□□ -1.52
ERCC1-204ENST00000423698 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
ERCC1-204ENST00000423698 PLAC4Q8WY50 150 aa5.58□□□□□ -1.52
ERCC1-204ENST00000423698 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
ERCC1-204ENST00000423698 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
ERCC1-204ENST00000423698 HMCN2Q8NDA2 5059 aa5.44□□□□□ -1.54
ERCC1-204ENST00000423698 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
ERCC1-204ENST00000423698 M0R2T5 61 aa5.3□□□□□ -1.56
ERCC1-204ENST00000423698 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
ERCC1-204ENST00000423698 INE1O15225 51 aa5.21□□□□□ -1.58
ERCC1-204ENST00000423698 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
ERCC1-204ENST00000423698 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
ERCC1-204ENST00000423698 LCE2CQ5TA81 110 aa5.11□□□□□ -1.59
ERCC1-204ENST00000423698 KRTAP10-10P60014 251 aa5.07□□□□□ -1.6
ERCC1-204ENST00000423698 USH2AO75445 5202 aa5.05□□□□□ -1.6
ERCC1-204ENST00000423698 TNP1P09430 55 aa5.01□□□□□ -1.61
ERCC1-204ENST00000423698 MT1HP80294 61 aa5□□□□□ -1.61
ERCC1-204ENST00000423698 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
ERCC1-204ENST00000423698 MT1FP04733 61 aa4.97□□□□□ -1.61
ERCC1-204ENST00000423698 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
ERCC1-204ENST00000423698 KMT2DO14686 5537 aa4.93□□□□□ -1.62
ERCC1-204ENST00000423698 MT2AP02795 61 aa4.92□□□□□ -1.62
ERCC1-204ENST00000423698 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
ERCC1-204ENST00000423698 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
ERCC1-204ENST00000423698 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
ERCC1-204ENST00000423698 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
ERCC1-204ENST00000423698 MT1BP07438 61 aa4.71□□□□□ -1.66
ERCC1-204ENST00000423698 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
ERCC1-204ENST00000423698 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
ERCC1-204ENST00000423698 MT1XP80297 61 aa4.68□□□□□ -1.66
ERCC1-204ENST00000423698 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
ERCC1-204ENST00000423698 KRTAP10-12P60413 245 aa4.61□□□□□ -1.67
ERCC1-204ENST00000423698 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
ERCC1-204ENST00000423698 LCE2BO14633 110 aa4.57□□□□□ -1.68
ERCC1-204ENST00000423698 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
ERCC1-204ENST00000423698 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
ERCC1-204ENST00000423698 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
ERCC1-204ENST00000423698 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
ERCC1-204ENST00000423698 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
ERCC1-204ENST00000423698 LCE2AQ5TA79 106 aaPredicted RBP4.47□□□□□ -1.69
ERCC1-204ENST00000423698 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
ERCC1-204ENST00000423698 SSPOA2VEC9 5147 aa4.43□□□□□ -1.7
ERCC1-204ENST00000423698 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
ERCC1-204ENST00000423698 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
ERCC1-204ENST00000423698 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
ERCC1-204ENST00000423698 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
ERCC1-204ENST00000423698 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
ERCC1-204ENST00000423698 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.73
ERCC1-204ENST00000423698 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
ERCC1-204ENST00000423698 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
ERCC1-204ENST00000423698 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
ERCC1-204ENST00000423698 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms