RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 GPR98Q8WXG9 6306 aa6.99□□□□□ -1.29
CHCHD3-202ENST00000423635 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
CHCHD3-202ENST00000423635 Q8N9L7 120 aa6.98□□□□□ -1.29
CHCHD3-202ENST00000423635 KRTAP9-9Q9BYP9 154 aa6.98□□□□□ -1.29
CHCHD3-202ENST00000423635 KRTAP9-4Q9BYQ2 154 aa6.98□□□□□ -1.29
CHCHD3-202ENST00000423635 PYY3Q5JQD4 70 aa6.97□□□□□ -1.29
CHCHD3-202ENST00000423635 NAA38Q9BRA0 125 aaKnown RBP6.93□□□□□ -1.3
CHCHD3-202ENST00000423635 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
CHCHD3-202ENST00000423635 A0A087WVE0 104 aa6.89□□□□□ -1.31
CHCHD3-202ENST00000423635 H0YAA0 97 aa6.89□□□□□ -1.31
CHCHD3-202ENST00000423635 A8MUN3 132 aa6.85□□□□□ -1.31
CHCHD3-202ENST00000423635 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
CHCHD3-202ENST00000423635 DSTQ03001 7570 aaKnown RBP6.82□□□□□ -1.32
CHCHD3-202ENST00000423635 TP53AIP1Q9HCN2 124 aa6.8□□□□□ -1.32
CHCHD3-202ENST00000423635 H3BT86 120 aa6.78□□□□□ -1.32
CHCHD3-202ENST00000423635 CYP4F30PQ9H0H9 118 aa6.77□□□□□ -1.32
CHCHD3-202ENST00000423635 M0R143 59 aa6.76□□□□□ -1.33
CHCHD3-202ENST00000423635 NDUFC1O43677 76 aa6.75□□□□□ -1.33
CHCHD3-202ENST00000423635 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
CHCHD3-202ENST00000423635 TSTD3H0UI37 97 aa6.72□□□□□ -1.33
CHCHD3-202ENST00000423635 KRTAP10-7P60409 375 aaPredicted RBP6.69□□□□□ -1.34
CHCHD3-202ENST00000423635 KRTAP10-12P60413 245 aa6.69□□□□□ -1.34
CHCHD3-202ENST00000423635 UBL5Q9BZL1 73 aa6.67□□□□□ -1.34
CHCHD3-202ENST00000423635 R4GN34 69 aa6.63□□□□□ -1.35
CHCHD3-202ENST00000423635 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
CHCHD3-202ENST00000423635 LOC101927531A0A1B0GV80 90 aa6.61□□□□□ -1.35
CHCHD3-202ENST00000423635 TMA7Q9Y2S6 64 aaKnown RBP6.61□□□□□ -1.35
CHCHD3-202ENST00000423635 K7EP34 96 aa6.6□□□□□ -1.35
CHCHD3-202ENST00000423635 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
CHCHD3-202ENST00000423635 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
CHCHD3-202ENST00000423635 TRAV22A0A0B4J277 110 aa6.56□□□□□ -1.36
CHCHD3-202ENST00000423635 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
CHCHD3-202ENST00000423635 A0A1W2PPM0 123 aa6.54□□□□□ -1.36
CHCHD3-202ENST00000423635 ACYP1P07311 99 aa6.54□□□□□ -1.36
CHCHD3-202ENST00000423635 M0QZ58 72 aa6.53□□□□□ -1.36
CHCHD3-202ENST00000423635 P0C880 135 aa6.53□□□□□ -1.36
CHCHD3-202ENST00000423635 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
CHCHD3-202ENST00000423635 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
CHCHD3-202ENST00000423635 BATFQ16520 125 aa6.49□□□□□ -1.37
CHCHD3-202ENST00000423635 TAX1BP3O14907 124 aa6.48□□□□□ -1.37
CHCHD3-202ENST00000423635 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
CHCHD3-202ENST00000423635 SPCS1Q9Y6A9 102 aa6.46□□□□□ -1.38
CHCHD3-202ENST00000423635 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
CHCHD3-202ENST00000423635 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
CHCHD3-202ENST00000423635 ATOX1O00244 68 aa6.39□□□□□ -1.39
CHCHD3-202ENST00000423635 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
CHCHD3-202ENST00000423635 UQCRQO14949 82 aa6.37□□□□□ -1.39
CHCHD3-202ENST00000423635 H0Y9P7 68 aa6.36□□□□□ -1.39
CHCHD3-202ENST00000423635 PRO0461Q9UI25 63 aa6.36□□□□□ -1.39
CHCHD3-202ENST00000423635 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
CHCHD3-202ENST00000423635 KRTAP4-2Q9BYR5 136 aa6.32□□□□□ -1.4
CHCHD3-202ENST00000423635 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
CHCHD3-202ENST00000423635 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
CHCHD3-202ENST00000423635 SMIM6P0DI80 62 aa6.26□□□□□ -1.41
CHCHD3-202ENST00000423635 MT1EP04732 61 aa6.25□□□□□ -1.41
CHCHD3-202ENST00000423635 KRTAP5-10Q6L8G5 202 aa6.25□□□□□ -1.41
CHCHD3-202ENST00000423635 MT4P47944 62 aa6.25□□□□□ -1.41
CHCHD3-202ENST00000423635 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
CHCHD3-202ENST00000423635 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
CHCHD3-202ENST00000423635 MT-ATP8P03928 68 aa6.21□□□□□ -1.42
CHCHD3-202ENST00000423635 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
CHCHD3-202ENST00000423635 MT1GP13640 62 aa6.13□□□□□ -1.43
CHCHD3-202ENST00000423635 HIST1H4AP62805 103 aaKnown RBP6.13□□□□□ -1.43
CHCHD3-202ENST00000423635 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
CHCHD3-202ENST00000423635 ETDBQ3ZM63 59 aa6.1□□□□□ -1.43
CHCHD3-202ENST00000423635 KRTAP5-7Q6L8G8 165 aa6.1□□□□□ -1.43
CHCHD3-202ENST00000423635 MP68P56378 58 aa6.09□□□□□ -1.43
CHCHD3-202ENST00000423635 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
CHCHD3-202ENST00000423635 F8W1H4 67 aa6.08□□□□□ -1.44
CHCHD3-202ENST00000423635 KRTAP5-4Q6L8H1 288 aa6.07□□□□□ -1.44
CHCHD3-202ENST00000423635 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
CHCHD3-202ENST00000423635 COL5A1-AS1Q5SY13 56 aa6.03□□□□□ -1.44
CHCHD3-202ENST00000423635 OCR1Q9BZK8 76 aa6.03□□□□□ -1.44
CHCHD3-202ENST00000423635 TRAV7A0A075B6U4 112 aa5.99□□□□□ -1.45
CHCHD3-202ENST00000423635 GTF2H5Q6ZYL4 71 aa5.99□□□□□ -1.45
CHCHD3-202ENST00000423635 MT1MQ8N339 61 aa5.99□□□□□ -1.45
CHCHD3-202ENST00000423635 LOC105371267A0A1B0GV96 52 aa5.99□□□□□ -1.45
CHCHD3-202ENST00000423635 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
CHCHD3-202ENST00000423635 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
CHCHD3-202ENST00000423635 H3BPC8 53 aa5.97□□□□□ -1.45
CHCHD3-202ENST00000423635 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
CHCHD3-202ENST00000423635 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
CHCHD3-202ENST00000423635 FAM240AA0A1B0GVK7 77 aa5.95□□□□□ -1.46
CHCHD3-202ENST00000423635 A0A0D9SG42 100 aa5.9□□□□□ -1.47
CHCHD3-202ENST00000423635 SPTSSBQ8NFR3 76 aa5.9□□□□□ -1.47
CHCHD3-202ENST00000423635 MT1LQ93083 61 aa5.89□□□□□ -1.47
CHCHD3-202ENST00000423635 ACYP2P14621 99 aa5.88□□□□□ -1.47
CHCHD3-202ENST00000423635 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
CHCHD3-202ENST00000423635 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
CHCHD3-202ENST00000423635 LINC00643Q86TS7 51 aa5.85□□□□□ -1.47
CHCHD3-202ENST00000423635 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
CHCHD3-202ENST00000423635 KRTAP20-2Q3LI61 65 aa5.74□□□□□ -1.49
CHCHD3-202ENST00000423635 CHKB-CPT1BH3BT56 60 aa5.72□□□□□ -1.49
CHCHD3-202ENST00000423635 PCP4L1A6NKN8 68 aa5.68□□□□□ -1.5
CHCHD3-202ENST00000423635 SCGB1A1P11684 91 aa5.64□□□□□ -1.51
CHCHD3-202ENST00000423635 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
CHCHD3-202ENST00000423635 KRTAP5-5Q701N2 237 aaPredicted RBP5.58□□□□□ -1.52
CHCHD3-202ENST00000423635 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
CHCHD3-202ENST00000423635 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
CHCHD3-202ENST00000423635 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms