RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 J3KT08 172 aa3.25□□□□□ -1.89
HLA-DQA1-204ENST00000422863 SCGB1C2P0DMR2 95 aa3.25□□□□□ -1.89
HLA-DQA1-204ENST00000422863 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
HLA-DQA1-204ENST00000422863 CCDC179H3BU77 68 aa3.24□□□□□ -1.89
HLA-DQA1-204ENST00000422863 TRACP01848 142 aa3.24□□□□□ -1.89
HLA-DQA1-204ENST00000422863 CCKP06307 115 aa3.24□□□□□ -1.89
HLA-DQA1-204ENST00000422863 MT3P25713 68 aa3.24□□□□□ -1.89
HLA-DQA1-204ENST00000422863 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
HLA-DQA1-204ENST00000422863 IGKV2D-30A0A075B6S6 120 aa3.23□□□□□ -1.89
HLA-DQA1-204ENST00000422863 HIST1H4GQ99525 98 aa3.23□□□□□ -1.89
HLA-DQA1-204ENST00000422863 FAM240AA0A1B0GVK7 77 aa3.22□□□□□ -1.89
HLA-DQA1-204ENST00000422863 H0YGX0 51 aa3.22□□□□□ -1.89
HLA-DQA1-204ENST00000422863 K7ERJ3 54 aa3.22□□□□□ -1.89
HLA-DQA1-204ENST00000422863 RBM3P98179 157 aaKnown RBP3.22□□□□□ -1.89
HLA-DQA1-204ENST00000422863 C9JAW5 83 aa3.21□□□□□ -1.9
HLA-DQA1-204ENST00000422863 UQCRQO14949 82 aa3.21□□□□□ -1.9
HLA-DQA1-204ENST00000422863 ACYP1P07311 99 aa3.21□□□□□ -1.9
HLA-DQA1-204ENST00000422863 PSMB2P49721 201 aa3.21□□□□□ -1.9
HLA-DQA1-204ENST00000422863 C8orf17Q9NRJ1 99 aa3.21□□□□□ -1.9
HLA-DQA1-204ENST00000422863 DSCR8Q96T75 97 aa3.2□□□□□ -1.9
HLA-DQA1-204ENST00000422863 C4orf26Q17RF5 130 aa3.19□□□□□ -1.9
HLA-DQA1-204ENST00000422863 H3BT86 120 aa3.18□□□□□ -1.9
HLA-DQA1-204ENST00000422863 NDUFB1O75438 58 aa3.18□□□□□ -1.9
HLA-DQA1-204ENST00000422863 KLKP1Q107X0 134 aa3.18□□□□□ -1.9
HLA-DQA1-204ENST00000422863 ATXN8Q156A1 80 aa3.18□□□□□ -1.9
HLA-DQA1-204ENST00000422863 COX7CP15954 63 aa3.17□□□□□ -1.9
HLA-DQA1-204ENST00000422863 TMEM258P61165 79 aa3.17□□□□□ -1.9
HLA-DQA1-204ENST00000422863 Q6ZVQ6 151 aa3.17□□□□□ -1.9
HLA-DQA1-204ENST00000422863 PRO1854Q9UHT4 67 aa3.17□□□□□ -1.9
HLA-DQA1-204ENST00000422863 A0A0B4J2C4 111 aa3.16□□□□□ -1.9
HLA-DQA1-204ENST00000422863 ORMDL1Q9P0S3 153 aa3.16□□□□□ -1.9
HLA-DQA1-204ENST00000422863 ATOX1O00244 68 aa3.15□□□□□ -1.91
HLA-DQA1-204ENST00000422863 NDUFS5O43920 106 aa3.15□□□□□ -1.91
HLA-DQA1-204ENST00000422863 CSAG1Q6PB30 78 aa3.15□□□□□ -1.91
HLA-DQA1-204ENST00000422863 LINC00643Q86TS7 51 aa3.15□□□□□ -1.91
HLA-DQA1-204ENST00000422863 PRO0628Q9UI54 55 aa3.15□□□□□ -1.91
HLA-DQA1-204ENST00000422863 Q5W150 140 aa3.14□□□□□ -1.91
HLA-DQA1-204ENST00000422863 LCA10Q71F78 164 aa3.14□□□□□ -1.91
HLA-DQA1-204ENST00000422863 S4R3F8 94 aa3.14□□□□□ -1.91
HLA-DQA1-204ENST00000422863 TMEM256-PLSCR3K7ERE1 68 aa3.13□□□□□ -1.91
HLA-DQA1-204ENST00000422863 DNAL4O96015 105 aa3.13□□□□□ -1.91
HLA-DQA1-204ENST00000422863 COX6CP09669 75 aa3.13□□□□□ -1.91
HLA-DQA1-204ENST00000422863 MRPL34Q9BQ48 92 aaKnown RBP3.13□□□□□ -1.91
HLA-DQA1-204ENST00000422863 TRIAP1O43715 76 aa3.12□□□□□ -1.91
HLA-DQA1-204ENST00000422863 HIST1H4AP62805 103 aaKnown RBP3.12□□□□□ -1.91
HLA-DQA1-204ENST00000422863 MT1XP80297 61 aa3.12□□□□□ -1.91
HLA-DQA1-204ENST00000422863 C7orf65Q6ZTY9 151 aa3.12□□□□□ -1.91
HLA-DQA1-204ENST00000422863 Q6ZQT0 140 aa3.11□□□□□ -1.91
HLA-DQA1-204ENST00000422863 V9GYY9 64 aa3.11□□□□□ -1.91
HLA-DQA1-204ENST00000422863 MMP24-AS1A0A0U1RRL7 71 aa3.1□□□□□ -1.91
HLA-DQA1-204ENST00000422863 SEC61GP60059 68 aa3.1□□□□□ -1.91
HLA-DQA1-204ENST00000422863 PRR15Q8IV56 129 aa3.1□□□□□ -1.91
HLA-DQA1-204ENST00000422863 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
HLA-DQA1-204ENST00000422863 TMEM254Q8TBM7 123 aa3.1□□□□□ -1.91
HLA-DQA1-204ENST00000422863 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
HLA-DQA1-204ENST00000422863 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
HLA-DQA1-204ENST00000422863 H3BQ85 93 aa3.08□□□□□ -1.92
HLA-DQA1-204ENST00000422863 SERP1Q9Y6X1 66 aa3.08□□□□□ -1.92
HLA-DQA1-204ENST00000422863 hDV103S1A0JD37 113 aa3.07□□□□□ -1.92
HLA-DQA1-204ENST00000422863 K7EQZ3 153 aa3.07□□□□□ -1.92
HLA-DQA1-204ENST00000422863 SMIM26A0A096LP01 95 aa3.06□□□□□ -1.92
HLA-DQA1-204ENST00000422863 ATP5EP56381 51 aaPredicted RBP3.06□□□□□ -1.92
HLA-DQA1-204ENST00000422863 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
HLA-DQA1-204ENST00000422863 C1orf64Q8NEQ6 169 aa3.06□□□□□ -1.92
HLA-DQA1-204ENST00000422863 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
HLA-DQA1-204ENST00000422863 ATP5EP2Q5VTU8 51 aa3.05□□□□□ -1.92
HLA-DQA1-204ENST00000422863 NDUFC1O43677 76 aa3.03□□□□□ -1.92
HLA-DQA1-204ENST00000422863 BAALC-AS2P0C853 105 aa3.02□□□□□ -1.93
HLA-DQA1-204ENST00000422863 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
HLA-DQA1-204ENST00000422863 A0A087WVE0 104 aa3.01□□□□□ -1.93
HLA-DQA1-204ENST00000422863 HCG22E2RYF7 251 aa3.01□□□□□ -1.93
HLA-DQA1-204ENST00000422863 NREPQ16612 68 aa3.01□□□□□ -1.93
HLA-DQA1-204ENST00000422863 TRAV7A0A075B6U4 112 aa3□□□□□ -1.93
HLA-DQA1-204ENST00000422863 BRK1Q8WUW1 75 aa3□□□□□ -1.93
HLA-DQA1-204ENST00000422863 A8MUN3 132 aa2.99□□□□□ -1.93
HLA-DQA1-204ENST00000422863 CYSTM1Q9H1C7 97 aa2.98□□□□□ -1.93
HLA-DQA1-204ENST00000422863 H7BZZ5 65 aa2.97□□□□□ -1.93
HLA-DQA1-204ENST00000422863 PMAIP1Q13794 54 aa2.97□□□□□ -1.93
HLA-DQA1-204ENST00000422863 JMJD7-PLA2G4BH0Y9G9 81 aa2.96□□□□□ -1.94
HLA-DQA1-204ENST00000422863 MT4P47944 62 aa2.96□□□□□ -1.94
HLA-DQA1-204ENST00000422863 C20orf197Q8N268 126 aa2.96□□□□□ -1.94
HLA-DQA1-204ENST00000422863 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
HLA-DQA1-204ENST00000422863 PDE6GP18545 87 aa2.95□□□□□ -1.94
HLA-DQA1-204ENST00000422863 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
HLA-DQA1-204ENST00000422863 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
HLA-DQA1-204ENST00000422863 CASC2Q6XLA1 102 aa2.95□□□□□ -1.94
HLA-DQA1-204ENST00000422863 Q8N9L7 120 aa2.95□□□□□ -1.94
HLA-DQA1-204ENST00000422863 C14orf132Q9NPU4 83 aa2.95□□□□□ -1.94
HLA-DQA1-204ENST00000422863 LOC110117498A0A087WWA1 95 aa2.94□□□□□ -1.94
HLA-DQA1-204ENST00000422863 A0A1B0GW54 56 aa2.94□□□□□ -1.94
HLA-DQA1-204ENST00000422863 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
HLA-DQA1-204ENST00000422863 ADM2Q7Z4H4 148 aa2.94□□□□□ -1.94
HLA-DQA1-204ENST00000422863 UBL5Q9BZL1 73 aa2.94□□□□□ -1.94
HLA-DQA1-204ENST00000422863 CXCL6P80162 114 aa2.93□□□□□ -1.94
HLA-DQA1-204ENST00000422863 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
HLA-DQA1-204ENST00000422863 BPY2O14599 106 aa2.91□□□□□ -1.94
HLA-DQA1-204ENST00000422863 Q1T7F1 81 aa2.9□□□□□ -1.95
HLA-DQA1-204ENST00000422863 H0YAA0 97 aa2.88□□□□□ -1.95
HLA-DQA1-204ENST00000422863 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
HLA-DQA1-204ENST00000422863 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms