RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PRO2289Q9P1D8 64 aa2.08□□□□□ -2.08
SFXN1-202ENST00000421887 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
SFXN1-202ENST00000421887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.07□□□□□ -2.08
SFXN1-202ENST00000421887 SMIM11BQ8TCY0 68 aa2.07□□□□□ -2.08
SFXN1-202ENST00000421887 HSPB8Q9UJY1 196 aa2.07□□□□□ -2.08
SFXN1-202ENST00000421887 LEPROTL1O95214 131 aa2.06□□□□□ -2.08
SFXN1-202ENST00000421887 C12orf57Q99622 126 aa2.06□□□□□ -2.08
SFXN1-202ENST00000421887 PMCHL2Q9BQD1 86 aa2.06□□□□□ -2.08
SFXN1-202ENST00000421887 SNCGO76070 127 aa2.05□□□□□ -2.08
SFXN1-202ENST00000421887 TRAV7A0A075B6U4 112 aa2.04□□□□□ -2.08
SFXN1-202ENST00000421887 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
SFXN1-202ENST00000421887 TRGC2P03986 189 aa2.04□□□□□ -2.08
SFXN1-202ENST00000421887 IFITM1P13164 125 aa2.04□□□□□ -2.08
SFXN1-202ENST00000421887 LCA10Q71F78 164 aa2.04□□□□□ -2.08
SFXN1-202ENST00000421887 IGKV3D-7A0A0C4DH55 119 aa2.03□□□□□ -2.08
SFXN1-202ENST00000421887 H3BMG7 143 aa2.03□□□□□ -2.08
SFXN1-202ENST00000421887 P0C880 135 aa2.03□□□□□ -2.08
SFXN1-202ENST00000421887 RAB37Q96AX2 223 aa2.03□□□□□ -2.08
SFXN1-202ENST00000421887 FABP4P15090 132 aa2.02□□□□□ -2.09
SFXN1-202ENST00000421887 TMEM258P61165 79 aa2.02□□□□□ -2.09
SFXN1-202ENST00000421887 KLKP1Q107X0 134 aa2.02□□□□□ -2.09
SFXN1-202ENST00000421887 BVES-AS1Q5T3Y7 98 aa2.02□□□□□ -2.09
SFXN1-202ENST00000421887 HIST3H2BBQ8N257 126 aa2.02□□□□□ -2.09
SFXN1-202ENST00000421887 CSAG1Q6PB30 78 aa2.01□□□□□ -2.09
SFXN1-202ENST00000421887 PRR15Q8IV56 129 aa2.01□□□□□ -2.09
SFXN1-202ENST00000421887 MUSTN1Q8IVN3 82 aa2.01□□□□□ -2.09
SFXN1-202ENST00000421887 FXYD2P54710 66 aa2□□□□□ -2.09
SFXN1-202ENST00000421887 NDUFA5Q16718 116 aa2□□□□□ -2.09
SFXN1-202ENST00000421887 LINC01554Q52M75 96 aa2□□□□□ -2.09
SFXN1-202ENST00000421887 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
SFXN1-202ENST00000421887 LINC00472Q9H8W2 130 aa2□□□□□ -2.09
SFXN1-202ENST00000421887 CRIPTQ9P021 101 aa2□□□□□ -2.09
SFXN1-202ENST00000421887 TRBV7-4A0A0J9YYF1 115 aa1.99□□□□□ -2.09
SFXN1-202ENST00000421887 NDUFB1O75438 58 aa1.99□□□□□ -2.09
SFXN1-202ENST00000421887 TRACP01848 142 aa1.99□□□□□ -2.09
SFXN1-202ENST00000421887 FABP2P12104 132 aa1.99□□□□□ -2.09
SFXN1-202ENST00000421887 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
SFXN1-202ENST00000421887 TMEM218A2RU14 115 aa1.98□□□□□ -2.09
SFXN1-202ENST00000421887 TSTD3H0UI37 97 aa1.98□□□□□ -2.09
SFXN1-202ENST00000421887 HIST1H2BLQ99880 126 aa1.98□□□□□ -2.09
SFXN1-202ENST00000421887 S4R3F8 94 aa1.98□□□□□ -2.09
SFXN1-202ENST00000421887 J3KT08 172 aa1.97□□□□□ -2.09
SFXN1-202ENST00000421887 TAX1BP3O14907 124 aa1.97□□□□□ -2.09
SFXN1-202ENST00000421887 PLAC4Q8WY50 150 aa1.97□□□□□ -2.09
SFXN1-202ENST00000421887 CCKP06307 115 aa1.96□□□□□ -2.1
SFXN1-202ENST00000421887 MT4P47944 62 aa1.96□□□□□ -2.1
SFXN1-202ENST00000421887 RBM3P98179 157 aaKnown RBP1.96□□□□□ -2.1
SFXN1-202ENST00000421887 SYS1-DBNDD2H3BUS1 97 aa1.95□□□□□ -2.1
SFXN1-202ENST00000421887 MT1XP80297 61 aa1.95□□□□□ -2.1
SFXN1-202ENST00000421887 C7orf65Q6ZTY9 151 aa1.95□□□□□ -2.1
SFXN1-202ENST00000421887 PDE6GP18545 87 aa1.94□□□□□ -2.1
SFXN1-202ENST00000421887 VPS25Q9BRG1 176 aa1.94□□□□□ -2.1
SFXN1-202ENST00000421887 H0YGX0 51 aa1.93□□□□□ -2.1
SFXN1-202ENST00000421887 K7EQZ3 153 aa1.92□□□□□ -2.1
SFXN1-202ENST00000421887 TMEM256-PLSCR3K7ERE1 68 aa1.92□□□□□ -2.1
SFXN1-202ENST00000421887 LINC01545Q5VT33 79 aa1.92□□□□□ -2.1
SFXN1-202ENST00000421887 CLLU1Q5K131 121 aa1.91□□□□□ -2.1
SFXN1-202ENST00000421887 Q6ZQT0 140 aa1.91□□□□□ -2.1
SFXN1-202ENST00000421887 LOC105371267A0A1B0GV96 52 aa1.9□□□□□ -2.11
SFXN1-202ENST00000421887 DNAL4O96015 105 aa1.9□□□□□ -2.11
SFXN1-202ENST00000421887 MRPL34Q9BQ48 92 aaKnown RBP1.9□□□□□ -2.11
SFXN1-202ENST00000421887 A0A1B0GX51 115 aa1.89□□□□□ -2.11
SFXN1-202ENST00000421887 APOC3P02656 99 aa1.89□□□□□ -2.11
SFXN1-202ENST00000421887 TMEM254Q8TBM7 123 aa1.89□□□□□ -2.11
SFXN1-202ENST00000421887 ORMDL1Q9P0S3 153 aa1.89□□□□□ -2.11
SFXN1-202ENST00000421887 hDV103S1A0JD37 113 aa1.88□□□□□ -2.11
SFXN1-202ENST00000421887 SVBPQ8N300 66 aa1.88□□□□□ -2.11
SFXN1-202ENST00000421887 BAALC-AS2P0C853 105 aa1.87□□□□□ -2.11
SFXN1-202ENST00000421887 SCGB1A1P11684 91 aa1.87□□□□□ -2.11
SFXN1-202ENST00000421887 KRTDAPP60985 99 aa1.87□□□□□ -2.11
SFXN1-202ENST00000421887 ATOH7Q8N100 152 aa1.86□□□□□ -2.11
SFXN1-202ENST00000421887 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
SFXN1-202ENST00000421887 HIST1H2BKO60814 126 aa1.85□□□□□ -2.11
SFXN1-202ENST00000421887 HIST1H2BJP06899 126 aa1.85□□□□□ -2.11
SFXN1-202ENST00000421887 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
SFXN1-202ENST00000421887 CYSTM1Q9H1C7 97 aa1.85□□□□□ -2.11
SFXN1-202ENST00000421887 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.11
SFXN1-202ENST00000421887 C9JAW5 83 aa1.84□□□□□ -2.11
SFXN1-202ENST00000421887 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.11
SFXN1-202ENST00000421887 H0YAA0 97 aa1.83□□□□□ -2.12
SFXN1-202ENST00000421887 K7ERJ3 54 aa1.83□□□□□ -2.12
SFXN1-202ENST00000421887 Q1T7F1 81 aa1.83□□□□□ -2.12
SFXN1-202ENST00000421887 KRTAP19-3Q7Z4W3 81 aa1.83□□□□□ -2.12
SFXN1-202ENST00000421887 RPS28P62857 69 aaKnown RBP1.82□□□□□ -2.12
SFXN1-202ENST00000421887 HCG22E2RYF7 251 aa1.81□□□□□ -2.12
SFXN1-202ENST00000421887 COA5Q86WW8 74 aa1.81□□□□□ -2.12
SFXN1-202ENST00000421887 NDUFC1O43677 76 aa1.8□□□□□ -2.12
SFXN1-202ENST00000421887 COX6CP09669 75 aa1.8□□□□□ -2.12
SFXN1-202ENST00000421887 NREPQ16612 68 aa1.8□□□□□ -2.12
SFXN1-202ENST00000421887 PRO1854Q9UHT4 67 aa1.79□□□□□ -2.12
SFXN1-202ENST00000421887 M0QZ58 72 aa1.78□□□□□ -2.12
SFXN1-202ENST00000421887 CASC2Q6XLA1 102 aa1.78□□□□□ -2.12
SFXN1-202ENST00000421887 C20orf197Q8N268 126 aa1.77□□□□□ -2.13
SFXN1-202ENST00000421887 MT1GP13640 62 aa1.76□□□□□ -2.13
SFXN1-202ENST00000421887 ROMO1P60602 79 aa1.76□□□□□ -2.13
SFXN1-202ENST00000421887 JMJD7-PLA2G4BH0Y9G9 81 aa1.75□□□□□ -2.13
SFXN1-202ENST00000421887 MT1EP04732 61 aa1.75□□□□□ -2.13
SFXN1-202ENST00000421887 BRK1Q8WUW1 75 aa1.75□□□□□ -2.13
SFXN1-202ENST00000421887 NAA38Q9BRA0 125 aaKnown RBP1.75□□□□□ -2.13
SFXN1-202ENST00000421887 A0A087WVE0 104 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms