RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 C20orf166-AS1Q96NR2 134 aa5.9□□□□□ -1.47
DDX56-203ENST00000421223 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
DDX56-203ENST00000421223 HSPG2P98160 4391 aa5.88□□□□□ -1.47
DDX56-203ENST00000421223 P0C880 135 aa5.86□□□□□ -1.47
DDX56-203ENST00000421223 KRTAP10-8P60410 259 aa5.86□□□□□ -1.47
DDX56-203ENST00000421223 RYR1P21817 5038 aa5.84□□□□□ -1.47
DDX56-203ENST00000421223 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
DDX56-203ENST00000421223 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
DDX56-203ENST00000421223 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
DDX56-203ENST00000421223 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
DDX56-203ENST00000421223 TNXBP22105 4242 aa5.78□□□□□ -1.48
DDX56-203ENST00000421223 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
DDX56-203ENST00000421223 UQCR11O14957 56 aa5.75□□□□□ -1.49
DDX56-203ENST00000421223 XP32Q5T750 250 aa5.75□□□□□ -1.49
DDX56-203ENST00000421223 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
DDX56-203ENST00000421223 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
DDX56-203ENST00000421223 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
DDX56-203ENST00000421223 COX6B2Q6YFQ2 88 aa5.73□□□□□ -1.49
DDX56-203ENST00000421223 RPL37P61927 97 aaKnown RBP5.72□□□□□ -1.49
DDX56-203ENST00000421223 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
DDX56-203ENST00000421223 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
DDX56-203ENST00000421223 LRP2P98164 4655 aa5.64□□□□□ -1.51
DDX56-203ENST00000421223 A0A1B0GU33 70 aa5.63□□□□□ -1.51
DDX56-203ENST00000421223 LCE2BO14633 110 aa5.62□□□□□ -1.51
DDX56-203ENST00000421223 ABCA13Q86UQ4 5058 aa5.61□□□□□ -1.51
DDX56-203ENST00000421223 LPAP08519 4548 aa5.61□□□□□ -1.51
DDX56-203ENST00000421223 CRIPTQ9P021 101 aa5.6□□□□□ -1.51
DDX56-203ENST00000421223 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
DDX56-203ENST00000421223 H0YAA0 97 aa5.58□□□□□ -1.52
DDX56-203ENST00000421223 S4R3F8 94 aa5.58□□□□□ -1.52
DDX56-203ENST00000421223 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
DDX56-203ENST00000421223 K7ERS5 55 aa5.56□□□□□ -1.52
DDX56-203ENST00000421223 TPRXLQ17RH7 258 aa5.53□□□□□ -1.52
DDX56-203ENST00000421223 A0A0D9SG42 100 aa5.53□□□□□ -1.52
DDX56-203ENST00000421223 HERC2O95714 4834 aa5.48□□□□□ -1.53
DDX56-203ENST00000421223 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
DDX56-203ENST00000421223 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
DDX56-203ENST00000421223 BIRC6Q9NR09 4857 aa5.42□□□□□ -1.54
DDX56-203ENST00000421223 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
DDX56-203ENST00000421223 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
DDX56-203ENST00000421223 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.55
DDX56-203ENST00000421223 MUC2Q02817 5179 aa5.33□□□□□ -1.56
DDX56-203ENST00000421223 HERC1Q15751 4861 aa5.28□□□□□ -1.56
DDX56-203ENST00000421223 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
DDX56-203ENST00000421223 M0QZ58 72 aa5.25□□□□□ -1.57
DDX56-203ENST00000421223 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
DDX56-203ENST00000421223 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
DDX56-203ENST00000421223 R4GN34 69 aa5.23□□□□□ -1.57
DDX56-203ENST00000421223 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
DDX56-203ENST00000421223 LORP23490 312 aaPredicted RBP5.18□□□□□ -1.58
DDX56-203ENST00000421223 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
DDX56-203ENST00000421223 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
DDX56-203ENST00000421223 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
DDX56-203ENST00000421223 HMCN2Q8NDA2 5059 aa5.08□□□□□ -1.6
DDX56-203ENST00000421223 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
DDX56-203ENST00000421223 CAMK2N1Q7Z7J9 78 aa5.07□□□□□ -1.6
DDX56-203ENST00000421223 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
DDX56-203ENST00000421223 M0R2T5 61 aa5.03□□□□□ -1.6
DDX56-203ENST00000421223 UBR4Q5T4S7 5183 aa5□□□□□ -1.61
DDX56-203ENST00000421223 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
DDX56-203ENST00000421223 MT1HP80294 61 aa4.82□□□□□ -1.64
DDX56-203ENST00000421223 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
DDX56-203ENST00000421223 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
DDX56-203ENST00000421223 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
DDX56-203ENST00000421223 MT1FP04733 61 aa4.72□□□□□ -1.65
DDX56-203ENST00000421223 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
DDX56-203ENST00000421223 MT2AP02795 61 aa4.71□□□□□ -1.66
DDX56-203ENST00000421223 TNP1P09430 55 aa4.69□□□□□ -1.66
DDX56-203ENST00000421223 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
DDX56-203ENST00000421223 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
DDX56-203ENST00000421223 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.66
DDX56-203ENST00000421223 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
DDX56-203ENST00000421223 MT1BP07438 61 aa4.49□□□□□ -1.69
DDX56-203ENST00000421223 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
DDX56-203ENST00000421223 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
DDX56-203ENST00000421223 USH2AO75445 5202 aa4.46□□□□□ -1.7
DDX56-203ENST00000421223 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
DDX56-203ENST00000421223 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
DDX56-203ENST00000421223 MT1XP80297 61 aa4.42□□□□□ -1.7
DDX56-203ENST00000421223 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
DDX56-203ENST00000421223 INE1O15225 51 aa4.37□□□□□ -1.71
DDX56-203ENST00000421223 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
DDX56-203ENST00000421223 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
DDX56-203ENST00000421223 FSIP2Q5CZC0 6907 aa4.3□□□□□ -1.72
DDX56-203ENST00000421223 KMT2DO14686 5537 aa4.29□□□□□ -1.72
DDX56-203ENST00000421223 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
DDX56-203ENST00000421223 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
DDX56-203ENST00000421223 KRTAP4-8A0A0G2JLE6 195 aa4.18□□□□□ -1.74
DDX56-203ENST00000421223 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
DDX56-203ENST00000421223 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
DDX56-203ENST00000421223 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
DDX56-203ENST00000421223 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
DDX56-203ENST00000421223 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
DDX56-203ENST00000421223 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
DDX56-203ENST00000421223 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
DDX56-203ENST00000421223 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
DDX56-203ENST00000421223 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
DDX56-203ENST00000421223 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
DDX56-203ENST00000421223 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
DDX56-203ENST00000421223 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms